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Fusion gene ID: 1868 |
FusionGeneSummary for ANKRD52_ASPHD1 |
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Fusion gene information | Fusion gene name: ANKRD52_ASPHD1 | Fusion gene ID: 1868 | Hgene | Tgene | Gene symbol | ANKRD52 | ASPHD1 | Gene ID | 283373 | 253982 |
Gene name | ankyrin repeat domain 52 | aspartate beta-hydroxylase domain containing 1 | |
Synonyms | ANKRD33 | - | |
Cytomap | 12q13.3 | 16p11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit CCVWG5837PP6-ARS-Cankyrin repeat domain 33ankyrin repeat domain-containing protein 52protein phosphatase 6 ankyrin repeat subunit Cserine/threonine-protein phosphatase 6 regula | aspartate beta-hydroxylase domain-containing protein 1 | |
Modification date | 20180519 | 20180403 | |
UniProtAcc | Q8NB46 | Q5U4P2 | |
Ensembl transtripts involved in fusion gene | ENST00000548241, ENST00000267116, | ENST00000483405, ENST00000308748, | |
Fusion gene scores | * DoF score | 9 X 8 X 4=288 | 2 X 2 X 2=8 |
# samples | 8 | 2 | |
** MAII score | log2(8/288*10)=-1.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: ANKRD52 [Title/Abstract] AND ASPHD1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | STAD | TCGA-MX-A666-01A | ANKRD52 | chr12 | 56649568 | - | ASPHD1 | chr16 | 29917109 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000548241 | ENST00000483405 | ANKRD52 | chr12 | 56649568 | - | ASPHD1 | chr16 | 29917109 | + |
intron-3CDS | ENST00000548241 | ENST00000308748 | ANKRD52 | chr12 | 56649568 | - | ASPHD1 | chr16 | 29917109 | + |
In-frame | ENST00000267116 | ENST00000483405 | ANKRD52 | chr12 | 56649568 | - | ASPHD1 | chr16 | 29917109 | + |
In-frame | ENST00000267116 | ENST00000308748 | ANKRD52 | chr12 | 56649568 | - | ASPHD1 | chr16 | 29917109 | + |
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FusionProtFeatures for ANKRD52_ASPHD1 |
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Hgene | Tgene |
ANKRD52 | ASPHD1 |
Putative regulatory subunit of protein phosphatase 6(PP6) that may be involved in the recognition of phosphoproteinsubstrates. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ANKRD52_ASPHD1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ANKRD52_ENST00000267116_chr12_56649568_-_ASPHD1_ENST00000483405_chr16_29917109_+_190aa MGILSITDQPPLVQAIFSRDVEEVRSLLSQKENINVLDQERRTPLHAAAYVGDVPILQLLLMSGANVNAKDTLWLTPLHRAAASRNEKVL GLLLAHSADVNARDKLWQTPLHVAAANRATKCAEALAPLLSSLNVADRSGRSALHHAVHSGHLEAPPKMGLEWSSSWTSGTPTWQGLSAR >In-frame_ANKRD52_ENST00000267116_chr12_56649568_-_ASPHD1_ENST00000308748_chr16_29917109_+_190aa MGILSITDQPPLVQAIFSRDVEEVRSLLSQKENINVLDQERRTPLHAAAYVGDVPILQLLLMSGANVNAKDTLWLTPLHRAAASRNEKVL GLLLAHSADVNARDKLWQTPLHVAAANRATKCAEALAPLLSSLNVADRSGRSALHHAVHSGHLEAPPKMGLEWSSSWTSGTPTWQGLSAR |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ANKRD52_ENST00000267116_chr12_56649568_-_ASPHD1_ENST00000483405_chr16_29917109_+_572nt ATGGGGATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCGAGATGTGGAGGAAGTGCGTTCCCTACTCTCGCAG AAGGAGAACATCAATGTGCTGGACCAAGAGAGGCGAACTCCATTGCATGCTGCTGCCTACGTAGGCGATGTCCCCATCCTCCAGTTGCTA CTGATGTCAGGTGCTAATGTCAATGCTAAGGACACACTGTGGCTGACCCCTCTTCATCGTGCTGCTGCCTCCCGAAACGAGAAGGTGCTG GGGCTGCTGCTGGCACATTCAGCAGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACC AAGTGTGCTGAGGCTCTGGCACCCCTGTTGAGCAGCCTCAACGTGGCTGACAGGAGCGGGCGCAGTGCTCTGCACCATGCAGTGCATAGT GGGCATCTTGAGGCTCCCCCGAAGATGGGCCTCGAGTGGTCTTCATCGTGGACCTCTGGCACCCCAACGTGGCAGGGGCTGAGCGCCAGG >In-frame_ANKRD52_ENST00000267116_chr12_56649568_-_ASPHD1_ENST00000308748_chr16_29917109_+_572nt ATGGGGATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCGAGATGTGGAGGAAGTGCGTTCCCTACTCTCGCAG AAGGAGAACATCAATGTGCTGGACCAAGAGAGGCGAACTCCATTGCATGCTGCTGCCTACGTAGGCGATGTCCCCATCCTCCAGTTGCTA CTGATGTCAGGTGCTAATGTCAATGCTAAGGACACACTGTGGCTGACCCCTCTTCATCGTGCTGCTGCCTCCCGAAACGAGAAGGTGCTG GGGCTGCTGCTGGCACATTCAGCAGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACC AAGTGTGCTGAGGCTCTGGCACCCCTGTTGAGCAGCCTCAACGTGGCTGACAGGAGCGGGCGCAGTGCTCTGCACCATGCAGTGCATAGT GGGCATCTTGAGGCTCCCCCGAAGATGGGCCTCGAGTGGTCTTCATCGTGGACCTCTGGCACCCCAACGTGGCAGGGGCTGAGCGCCAGG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ANKRD52_ENST00000267116_chr12_56649568_-_ASPHD1_ENST00000483405_chr16_29917109_+_853nt AGGCGGGGCCGCGCTCTCCCTGCAGCCGCCACCGCAGCCGCCGCCTGGGCCGCTCCGTGTCCCCGGTGGAGCCGCCGCCGCCGCCGCCGG GAGCTCGATGCGGACGGAGCCCGGGCCGAGCCATGGGGATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCGAG ATGTGGAGGAAGTGCGTTCCCTACTCTCGCAGAAGGAGAACATCAATGTGCTGGACCAAGAGAGGCGAACTCCATTGCATGCTGCTGCCT ACGTAGGCGATGTCCCCATCCTCCAGTTGCTACTGATGTCAGGTGCTAATGTCAATGCTAAGGACACACTGTGGCTGACCCCTCTTCATC GTGCTGCTGCCTCCCGAAACGAGAAGGTGCTGGGGCTGCTGCTGGCACATTCAGCAGATGTGAATGCCCGGGACAAGCTGTGGCAGACAC CACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCTGAGGCTCTGGCACCCCTGTTGAGCAGCCTCAACGTGGCTGACAGGAGCG GGCGCAGTGCTCTGCACCATGCAGTGCATAGTGGGCATCTTGAGGCTCCCCCGAAGATGGGCCTCGAGTGGTCTTCATCGTGGACCTCTG GCACCCCAACGTGGCAGGGGCTGAGCGCCAGGCCCTCGACTTTGTCTTCGCCCCAGACCCTTGAAGGAAGGTGCTCCCTTCACACACCCA GGCTGGAGAGACACTGCGCTCAGGGACGGCTTGATGGTAGCCAGGACCTCCTCTCTACTGCGGGGGTGGGCGGGGGCGGAGGATGGGAAC >In-frame_ANKRD52_ENST00000267116_chr12_56649568_-_ASPHD1_ENST00000308748_chr16_29917109_+_853nt AGGCGGGGCCGCGCTCTCCCTGCAGCCGCCACCGCAGCCGCCGCCTGGGCCGCTCCGTGTCCCCGGTGGAGCCGCCGCCGCCGCCGCCGG GAGCTCGATGCGGACGGAGCCCGGGCCGAGCCATGGGGATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCGAG ATGTGGAGGAAGTGCGTTCCCTACTCTCGCAGAAGGAGAACATCAATGTGCTGGACCAAGAGAGGCGAACTCCATTGCATGCTGCTGCCT ACGTAGGCGATGTCCCCATCCTCCAGTTGCTACTGATGTCAGGTGCTAATGTCAATGCTAAGGACACACTGTGGCTGACCCCTCTTCATC GTGCTGCTGCCTCCCGAAACGAGAAGGTGCTGGGGCTGCTGCTGGCACATTCAGCAGATGTGAATGCCCGGGACAAGCTGTGGCAGACAC CACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCTGAGGCTCTGGCACCCCTGTTGAGCAGCCTCAACGTGGCTGACAGGAGCG GGCGCAGTGCTCTGCACCATGCAGTGCATAGTGGGCATCTTGAGGCTCCCCCGAAGATGGGCCTCGAGTGGTCTTCATCGTGGACCTCTG GCACCCCAACGTGGCAGGGGCTGAGCGCCAGGCCCTCGACTTTGTCTTCGCCCCAGACCCTTGAAGGAAGGTGCTCCCTTCACACACCCA GGCTGGAGAGACACTGCGCTCAGGGACGGCTTGATGGTAGCCAGGACCTCCTCTCTACTGCGGGGGTGGGCGGGGGCGGAGGATGGGAAC |
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FusionGenePPI for ANKRD52_ASPHD1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ANKRD52 | USP36, USP49, PLK1, PPP6C, SIRT7, MOB1A, MOB1B, PPP6R1, PPP6R2, PPP6R3, MOV10, NXF1, AP2M1, DCLRE1C, CEP44, XPO1, FOXK1, FOXK2, HIF1AN, ZNF785, USP10, TRMT2A, ZNF263, ZNF414, CPNE5, ZNF669, FAM19A3, ZNF223, FOXD4, KIF2B, CAMK4, TRIM25 | ASPHD1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ANKRD52_ASPHD1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ANKRD52_ASPHD1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |