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Fusion gene ID: 18474 |
FusionGeneSummary for KDM4C_MEIS1 |
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Fusion gene information | Fusion gene name: KDM4C_MEIS1 | Fusion gene ID: 18474 | Hgene | Tgene | Gene symbol | KDM4C | MEIS1 | Gene ID | 23081 | 4211 |
Gene name | lysine demethylase 4C | Meis homeobox 1 | |
Synonyms | GASC1|JHDM3C|JMJD2C|TDRD14C | - | |
Cytomap | 9p24.1 | 2p14 | |
Type of gene | protein-coding | protein-coding | |
Description | lysine-specific demethylase 4CJmjC domain-containing histone demethylation protein 3Cgene amplified in squamous cell carcinoma 1 proteinjumonji domain-containing protein 2Clysine (K)-specific demethylase 4Ctudor domain containing 14C | homeobox protein Meis1Meis1, myeloid ecotropic viral integration site 1 homologWUGSC:H_NH0444B04.1leukemogenic homolog protein | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9H3R0 | O00470 | |
Ensembl transtripts involved in fusion gene | ENST00000535193, ENST00000543771, ENST00000381306, ENST00000381309, ENST00000442236, ENST00000489243, ENST00000536108, ENST00000428870, ENST00000401787, | ENST00000560281, ENST00000407092, ENST00000272369, ENST00000488550, ENST00000398506, ENST00000444274, ENST00000495021, ENST00000409517, | |
Fusion gene scores | * DoF score | 11 X 8 X 10=880 | 3 X 3 X 2=18 |
# samples | 12 | 3 | |
** MAII score | log2(12/880*10)=-2.87446911791614 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: KDM4C [Title/Abstract] AND MEIS1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | KDM4C | GO:0006357 | regulation of transcription by RNA polymerase II | 17277772 |
Hgene | KDM4C | GO:0033169 | histone H3-K9 demethylation | 18066052|21914792 |
Hgene | KDM4C | GO:0070544 | histone H3-K36 demethylation | 21914792 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | DA081548 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000535193 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000535193 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000535193 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000535193 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000535193 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000535193 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000535193 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000535193 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
In-frame | ENST00000543771 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000543771 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000543771 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000543771 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000543771 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000543771 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000543771 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000543771 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
In-frame | ENST00000381306 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381306 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381306 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381306 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381306 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000381306 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000381306 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000381306 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
In-frame | ENST00000381309 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381309 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381309 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381309 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000381309 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000381309 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000381309 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000381309 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000442236 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000442236 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000442236 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000442236 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000442236 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3UTR | ENST00000442236 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3UTR | ENST00000442236 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3UTR | ENST00000442236 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3CDS | ENST00000489243 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3CDS | ENST00000489243 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3CDS | ENST00000489243 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3CDS | ENST00000489243 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3CDS | ENST00000489243 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3UTR | ENST00000489243 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3UTR | ENST00000489243 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
3UTR-3UTR | ENST00000489243 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000536108 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000536108 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000536108 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000536108 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3CDS | ENST00000536108 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3UTR | ENST00000536108 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3UTR | ENST00000536108 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5UTR-3UTR | ENST00000536108 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3CDS | ENST00000428870 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3CDS | ENST00000428870 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3CDS | ENST00000428870 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3CDS | ENST00000428870 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3CDS | ENST00000428870 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3UTR | ENST00000428870 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3UTR | ENST00000428870 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
intron-3UTR | ENST00000428870 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
In-frame | ENST00000401787 | ENST00000560281 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000401787 | ENST00000407092 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000401787 | ENST00000272369 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000401787 | ENST00000488550 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
Frame-shift | ENST00000401787 | ENST00000398506 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000401787 | ENST00000444274 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000401787 | ENST00000495021 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
5CDS-3UTR | ENST00000401787 | ENST00000409517 | KDM4C | chr9 | 6793134 | + | MEIS1 | chr2 | 66794583 | + |
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FusionProtFeatures for KDM4C_MEIS1 |
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Hgene | Tgene |
KDM4C | MEIS1 |
Acts as a transcriptional regulator of PAX6. Acts as atranscriptional activator of PF4 in complex with PBX1 or PBX2.Required for hematopoiesis, megakaryocyte lineage development andvascular patterning. May function as a cofactor for HOXA7 andHOXA9 in the induction of myeloid leukemias.{ECO:0000269|PubMed:12609849}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 16_58 | 70 | 836 | Domain | JmjN |
Tgene | >MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000272369 | + | 8 | 13 | 335_390 | 321 | 1109 | Region | Required for transcriptional activation |
Tgene | >MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000398506 | + | 7 | 11 | 335_390 | 319 | 464 | Region | Required for transcriptional activation |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 144_310 | 48 | 1048 | Domain | JmjC |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 16_58 | 48 | 1048 | Domain | JmjN |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 877_934 | 48 | 1048 | Domain | Note=Tudor 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 935_991 | 48 | 1048 | Domain | Note=Tudor 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 144_310 | 48 | 1057 | Domain | JmjC |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 16_58 | 48 | 1057 | Domain | JmjN |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 877_934 | 48 | 1057 | Domain | Note=Tudor 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 935_991 | 48 | 1057 | Domain | Note=Tudor 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 144_310 | 70 | 836 | Domain | JmjC |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 877_934 | 70 | 836 | Domain | Note=Tudor 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 935_991 | 70 | 836 | Domain | Note=Tudor 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 144_310 | 48 | 814 | Domain | JmjC |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 16_58 | 48 | 814 | Domain | JmjN |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 877_934 | 48 | 814 | Domain | Note=Tudor 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 935_991 | 48 | 814 | Domain | Note=Tudor 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 689_747 | 48 | 1048 | Zinc finger | Note=PHD-type 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 752_785 | 48 | 1048 | Zinc finger | C2HC pre-PHD-type |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381306 | + | 2 | 21 | 808_865 | 48 | 1048 | Zinc finger | PHD-type 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 689_747 | 48 | 1057 | Zinc finger | Note=PHD-type 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 752_785 | 48 | 1057 | Zinc finger | C2HC pre-PHD-type |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000381309 | + | 2 | 22 | 808_865 | 48 | 1057 | Zinc finger | PHD-type 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 689_747 | 70 | 836 | Zinc finger | Note=PHD-type 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 752_785 | 70 | 836 | Zinc finger | C2HC pre-PHD-type |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000535193 | + | 2 | 18 | 808_865 | 70 | 836 | Zinc finger | PHD-type 2 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 689_747 | 48 | 814 | Zinc finger | Note=PHD-type 1 |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 752_785 | 48 | 814 | Zinc finger | C2HC pre-PHD-type |
Hgene | >KDM4C | chr9:6793134 | chr2:66794583 | ENST00000543771 | + | 2 | 18 | 808_865 | 48 | 814 | Zinc finger | PHD-type 2 |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000272369 | + | 8 | 13 | 194_240 | 321 | 1109 | Compositional bias | Note=Ser/Thr-rich |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000272369 | + | 8 | 13 | 242_269 | 321 | 1109 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000272369 | + | 8 | 13 | 262_269 | 321 | 1109 | Compositional bias | Note=Poly-Asp |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000398506 | + | 7 | 11 | 194_240 | 319 | 464 | Compositional bias | Note=Ser/Thr-rich |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000398506 | + | 7 | 11 | 242_269 | 319 | 464 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000398506 | + | 7 | 11 | 262_269 | 319 | 464 | Compositional bias | Note=Poly-Asp |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000272369 | + | 8 | 13 | 272_334 | 321 | 1109 | DNA binding | Homeobox%3B TALE-type |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000398506 | + | 7 | 11 | 272_334 | 319 | 464 | DNA binding | Homeobox%3B TALE-type |
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FusionGeneSequence for KDM4C_MEIS1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_KDM4C_ENST00000535193_chr9_6793134_+_MEIS1_ENST00000560281_chr2_66794583_+_1380nt ATGGCTGACATGATGGTCTGTGACCTGAAAGTTGTTGAATAGTTGGAGTGTTCTGCATTCATGTGGAAGAGGCTAAAGGATGTTTGATGA AGCACTATGGGCTGCCCTGGAAGAGGACTGAAGAAGCAGCTGCAGACACTGCCCTAACCATCATGGAGGTGGCCGAGGTGGAAAGTCCTC TGAACCCCAGCTGTAAGATAATGACCTTCAGACCCTCCATGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATACATGGAGTCTAAAG GAGCCCATCGTGCGGGTCTTGCAAAGGTTTATTAATGCCCGGAGAAGAATAGTGCAGCCCATGATAGACCAGTCCAACCGAGCAGGCAAG TCCCCCATAGTGACTGTATTCAAGTCACGCAAGCGAAAACCATCCTCAAGCCATTCACCGGGAGGTCCGCTACCTGGTAAATAAACTGGG AGTGAGTATAGGAACGCCTGGCAATTAAAATTAAACCAGTTTCGTTTCATAACAACACTAATCAATTTAACATCATTATAAAACGTTTGG AGAAGGTGGAAAAAAAAAGCCAACAGAGAAAAGTAACTCTTAAATAATATGCTCAGTTACAATATTCTTTGTACACATTCAATATATTAA TGTTATTTTTTTTCTGAGTTTGCCTTCCCAGCTCTTTCTGCTACTATGACCACTCCCTGGTGCATGGCTTGGTGTGGAATTGCTGTAAAC TTTATTACCTGTCAAAAGGGCAAAGGGGTCAGGATTGCTTGTGGGACTCAGTAAAGTTCAAAGACATTCAATGAGGTAGAGCTTTTGTGT GCTTTAATAACCCAAGGCAGCTTACTTCTGAAGCAGCTTTTCATGTACAGTTAAAACACGGGATTCAGGTAGTGGTATAAATACATGGTT CTTATTTCTCAGACCTTCTCTTGTTAATATCCATCTTCTGGTGTTCGACTTTTTTTTTTTTTAATAACAGTCTTTTTGTTTTGTTTTTAA ATTATGAGCTTAAAATGGCGATACTTCTATGGGATCCTGGCTTGTGGATCTAAAAATCCAAGAAACATCTCTCTAGGATTTGTTTTTGCA TTATAATATGCCAGTAAGATAACAAGAGTATTTGCTAGGGGTGATGTGAGTCTTTACTTTCTTTATGAAATACTCTCTCATCTCTTAGGG AGCACTATGGAAAACTATGTTAGCATCGCATTGAGGCAACACACATTTACTCCTGTAACTTTTTTTCTTCCAACACCCATTATGTGGTCA CCAGACAAAACCCAAGCAGAAAGTTTCCACACCTTAACTGTTCCCTCTTTGAGCTAGATGTTTTAAAAACTCAGTCACAGAGGTGTGTAG >In-frame_KDM4C_ENST00000543771_chr9_6793134_+_MEIS1_ENST00000560281_chr2_66794583_+_1808nt GCCATAGGTGCGCGTCGGCGCCCAGGAGGACGTGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGG CAAGGTTCTGTGCACCTGTTTTCTCCTTCTACGCGAGTATCTTTCCCCTCCGGAAAGAATGGGATATGCCTGTGTCCAAAGGACAAGAAG ATGCGCGCCAGCAAGCCTAAGTTAACCACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCACCTTTAAGCTGTTTGTAAGCCC ACGTGACTCACCAAGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCGCGCAGGGAGAGCCGGCGGTGCGCGCGCCTTCGCCG CTGCCTCCCACCCACCCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAGCGAACAGCT GTCACCTAGTGCGGAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACCGAGTCGTGC TCTCGCCCCAACCCGCGCGCCAGACACTGCCCTAACCATCATGGAGGTGGCCGAGGTGGAAAGTCCTCTGAACCCCAGCTGTAAGATAAT GACCTTCAGACCCTCCATGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATACATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGC AAAGGTTTATTAATGCCCGGAGAAGAATAGTGCAGCCCATGATAGACCAGTCCAACCGAGCAGGCAAGTCCCCCATAGTGACTGTATTCA AGTCACGCAAGCGAAAACCATCCTCAAGCCATTCACCGGGAGGTCCGCTACCTGGTAAATAAACTGGGAGTGAGTATAGGAACGCCTGGC AATTAAAATTAAACCAGTTTCGTTTCATAACAACACTAATCAATTTAACATCATTATAAAACGTTTGGAGAAGGTGGAAAAAAAAAGCCA ACAGAGAAAAGTAACTCTTAAATAATATGCTCAGTTACAATATTCTTTGTACACATTCAATATATTAATGTTATTTTTTTTCTGAGTTTG CCTTCCCAGCTCTTTCTGCTACTATGACCACTCCCTGGTGCATGGCTTGGTGTGGAATTGCTGTAAACTTTATTACCTGTCAAAAGGGCA AAGGGGTCAGGATTGCTTGTGGGACTCAGTAAAGTTCAAAGACATTCAATGAGGTAGAGCTTTTGTGTGCTTTAATAACCCAAGGCAGCT TACTTCTGAAGCAGCTTTTCATGTACAGTTAAAACACGGGATTCAGGTAGTGGTATAAATACATGGTTCTTATTTCTCAGACCTTCTCTT GTTAATATCCATCTTCTGGTGTTCGACTTTTTTTTTTTTTAATAACAGTCTTTTTGTTTTGTTTTTAAATTATGAGCTTAAAATGGCGAT ACTTCTATGGGATCCTGGCTTGTGGATCTAAAAATCCAAGAAACATCTCTCTAGGATTTGTTTTTGCATTATAATATGCCAGTAAGATAA CAAGAGTATTTGCTAGGGGTGATGTGAGTCTTTACTTTCTTTATGAAATACTCTCTCATCTCTTAGGGAGCACTATGGAAAACTATGTTA GCATCGCATTGAGGCAACACACATTTACTCCTGTAACTTTTTTTCTTCCAACACCCATTATGTGGTCACCAGACAAAACCCAAGCAGAAA GTTTCCACACCTTAACTGTTCCCTCTTTGAGCTAGATGTTTTAAAAACTCAGTCACAGAGGTGTGTAGATCTAGTCTGAGAGAAATTTCA >In-frame_KDM4C_ENST00000381306_chr9_6793134_+_MEIS1_ENST00000560281_chr2_66794583_+_1793nt CGGCGCCCAGGAGGACGTGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCAC CTGTTTTCTCCTTCTACGCGAGTATCTTTCCCCTCCGGAAAGAATGGGATATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAGCAAG CCTAAGTTAACCACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCACCTTTAAGCTGTTTGTAAGCCCACGTGACTCACCAAG TGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCGCGCAGGGAGAGCCGGCGGTGCGCGCGCCTTCGCCGCTGCCTCCCACCCAC CCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCACCTAGTGCGGA ACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTCGCCCCAACCCG CGCGCCAGACACTGCCCTAACCATCATGGAGGTGGCCGAGGTGGAAAGTCCTCTGAACCCCAGCTGTAAGATAATGACCTTCAGACCCTC CATGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATACATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGCAAAGGTTTATTAATG CCCGGAGAAGAATAGTGCAGCCCATGATAGACCAGTCCAACCGAGCAGGCAAGTCCCCCATAGTGACTGTATTCAAGTCACGCAAGCGAA AACCATCCTCAAGCCATTCACCGGGAGGTCCGCTACCTGGTAAATAAACTGGGAGTGAGTATAGGAACGCCTGGCAATTAAAATTAAACC AGTTTCGTTTCATAACAACACTAATCAATTTAACATCATTATAAAACGTTTGGAGAAGGTGGAAAAAAAAAGCCAACAGAGAAAAGTAAC TCTTAAATAATATGCTCAGTTACAATATTCTTTGTACACATTCAATATATTAATGTTATTTTTTTTCTGAGTTTGCCTTCCCAGCTCTTT CTGCTACTATGACCACTCCCTGGTGCATGGCTTGGTGTGGAATTGCTGTAAACTTTATTACCTGTCAAAAGGGCAAAGGGGTCAGGATTG CTTGTGGGACTCAGTAAAGTTCAAAGACATTCAATGAGGTAGAGCTTTTGTGTGCTTTAATAACCCAAGGCAGCTTACTTCTGAAGCAGC TTTTCATGTACAGTTAAAACACGGGATTCAGGTAGTGGTATAAATACATGGTTCTTATTTCTCAGACCTTCTCTTGTTAATATCCATCTT CTGGTGTTCGACTTTTTTTTTTTTTAATAACAGTCTTTTTGTTTTGTTTTTAAATTATGAGCTTAAAATGGCGATACTTCTATGGGATCC TGGCTTGTGGATCTAAAAATCCAAGAAACATCTCTCTAGGATTTGTTTTTGCATTATAATATGCCAGTAAGATAACAAGAGTATTTGCTA GGGGTGATGTGAGTCTTTACTTTCTTTATGAAATACTCTCTCATCTCTTAGGGAGCACTATGGAAAACTATGTTAGCATCGCATTGAGGC AACACACATTTACTCCTGTAACTTTTTTTCTTCCAACACCCATTATGTGGTCACCAGACAAAACCCAAGCAGAAAGTTTCCACACCTTAA >In-frame_KDM4C_ENST00000381309_chr9_6793134_+_MEIS1_ENST00000560281_chr2_66794583_+_1793nt CGGCGCCCAGGAGGACGTGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGGCAAGGTTCTGTGCAC CTGTTTTCTCCTTCTACGCGAGTATCTTTCCCCTCCGGAAAGAATGGGATATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAGCAAG CCTAAGTTAACCACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCACCTTTAAGCTGTTTGTAAGCCCACGTGACTCACCAAG TGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCGCGCAGGGAGAGCCGGCGGTGCGCGCGCCTTCGCCGCTGCCTCCCACCCAC CCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCACCTAGTGCGGA ACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTCGCCCCAACCCG CGCGCCAGACACTGCCCTAACCATCATGGAGGTGGCCGAGGTGGAAAGTCCTCTGAACCCCAGCTGTAAGATAATGACCTTCAGACCCTC CATGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATACATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGCAAAGGTTTATTAATG CCCGGAGAAGAATAGTGCAGCCCATGATAGACCAGTCCAACCGAGCAGGCAAGTCCCCCATAGTGACTGTATTCAAGTCACGCAAGCGAA AACCATCCTCAAGCCATTCACCGGGAGGTCCGCTACCTGGTAAATAAACTGGGAGTGAGTATAGGAACGCCTGGCAATTAAAATTAAACC AGTTTCGTTTCATAACAACACTAATCAATTTAACATCATTATAAAACGTTTGGAGAAGGTGGAAAAAAAAAGCCAACAGAGAAAAGTAAC TCTTAAATAATATGCTCAGTTACAATATTCTTTGTACACATTCAATATATTAATGTTATTTTTTTTCTGAGTTTGCCTTCCCAGCTCTTT CTGCTACTATGACCACTCCCTGGTGCATGGCTTGGTGTGGAATTGCTGTAAACTTTATTACCTGTCAAAAGGGCAAAGGGGTCAGGATTG CTTGTGGGACTCAGTAAAGTTCAAAGACATTCAATGAGGTAGAGCTTTTGTGTGCTTTAATAACCCAAGGCAGCTTACTTCTGAAGCAGC TTTTCATGTACAGTTAAAACACGGGATTCAGGTAGTGGTATAAATACATGGTTCTTATTTCTCAGACCTTCTCTTGTTAATATCCATCTT CTGGTGTTCGACTTTTTTTTTTTTTAATAACAGTCTTTTTGTTTTGTTTTTAAATTATGAGCTTAAAATGGCGATACTTCTATGGGATCC TGGCTTGTGGATCTAAAAATCCAAGAAACATCTCTCTAGGATTTGTTTTTGCATTATAATATGCCAGTAAGATAACAAGAGTATTTGCTA GGGGTGATGTGAGTCTTTACTTTCTTTATGAAATACTCTCTCATCTCTTAGGGAGCACTATGGAAAACTATGTTAGCATCGCATTGAGGC AACACACATTTACTCCTGTAACTTTTTTTCTTCCAACACCCATTATGTGGTCACCAGACAAAACCCAAGCAGAAAGTTTCCACACCTTAA >In-frame_KDM4C_ENST00000401787_chr9_6793134_+_MEIS1_ENST00000560281_chr2_66794583_+_1795nt GTCGGCGCCCAGGAGGACGTGTGGCGCGTGGACTACATCAGGTCCAGCCCTGCGGGACCCCAGCCAGCGCTTCCGGGCAAGGTTCTGTGC ACCTGTTTTCTCCTTCTACGCGAGTATCTTTCCCCTCCGGAAAGAATGGGATATGCCTGTGTCCAAAGGACAAGAAGATGCGCGCCAGCA AGCCTAAGTTAACCACAGCGCGGAAGTTGAGCCCAAAGCAAGAGCGTGCCGGGCACCTTTAAGCTGTTTGTAAGCCCACGTGACTCACCA AGTGCGGGCCCCAGCGGTCACGTGACGGCGCGCGCGCCCTCGCGCAGGGAGAGCCGGCGGTGCGCGCGCCTTCGCCGCTGCCTCCCACCC ACCCCCTCGACGGGAGGGTGAGGCGCGGCGCAGTGATCGGGCGGCCGGGGTCCTGTGCGCGTGCGCAGCGAACAGCTGTCACCTAGTGCG GAACAAGTCTCCCAAATTTCCCAAATCTCCCTGGGCCGGAGGCCACTGTCTTCTCTTCCTCCTCCACCGAGTCGTGCTCTCGCCCCAACC CGCGCGCCAGACACTGCCCTAACCATCATGGAGGTGGCCGAGGTGGAAAGTCCTCTGAACCCCAGCTGTAAGATAATGACCTTCAGACCC TCCATGGAGGAGTTCCGGGAGTTCAACAAATACCTTGCATACATGGAGTCTAAAGGAGCCCATCGTGCGGGTCTTGCAAAGGTTTATTAA TGCCCGGAGAAGAATAGTGCAGCCCATGATAGACCAGTCCAACCGAGCAGGCAAGTCCCCCATAGTGACTGTATTCAAGTCACGCAAGCG AAAACCATCCTCAAGCCATTCACCGGGAGGTCCGCTACCTGGTAAATAAACTGGGAGTGAGTATAGGAACGCCTGGCAATTAAAATTAAA CCAGTTTCGTTTCATAACAACACTAATCAATTTAACATCATTATAAAACGTTTGGAGAAGGTGGAAAAAAAAAGCCAACAGAGAAAAGTA ACTCTTAAATAATATGCTCAGTTACAATATTCTTTGTACACATTCAATATATTAATGTTATTTTTTTTCTGAGTTTGCCTTCCCAGCTCT TTCTGCTACTATGACCACTCCCTGGTGCATGGCTTGGTGTGGAATTGCTGTAAACTTTATTACCTGTCAAAAGGGCAAAGGGGTCAGGAT TGCTTGTGGGACTCAGTAAAGTTCAAAGACATTCAATGAGGTAGAGCTTTTGTGTGCTTTAATAACCCAAGGCAGCTTACTTCTGAAGCA GCTTTTCATGTACAGTTAAAACACGGGATTCAGGTAGTGGTATAAATACATGGTTCTTATTTCTCAGACCTTCTCTTGTTAATATCCATC TTCTGGTGTTCGACTTTTTTTTTTTTTAATAACAGTCTTTTTGTTTTGTTTTTAAATTATGAGCTTAAAATGGCGATACTTCTATGGGAT CCTGGCTTGTGGATCTAAAAATCCAAGAAACATCTCTCTAGGATTTGTTTTTGCATTATAATATGCCAGTAAGATAACAAGAGTATTTGC TAGGGGTGATGTGAGTCTTTACTTTCTTTATGAAATACTCTCTCATCTCTTAGGGAGCACTATGGAAAACTATGTTAGCATCGCATTGAG GCAACACACATTTACTCCTGTAACTTTTTTTCTTCCAACACCCATTATGTGGTCACCAGACAAAACCCAAGCAGAAAGTTTCCACACCTT |
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FusionGenePPI for KDM4C_MEIS1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
KDM4C | KDM4A, KDM4C, HIST1H3A, H3F3A, PPARG, HDAC1, HDAC3, HIST2H3C, SHMT2, MOV10, NXF1, TRIM25 | MEIS1 | HOXA9, PBX1, HOXD9, EMX2, TLX2, HOXC11, CREB1, CRTC1, CREBBP, ETS1, TRMT10B, SHMT2, LMX1B, MAB21L1, MEIS2, MAB21L2, FOXC1, FAM222A, C16orf71, CCDC120, C5orf24, COL20A1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000272369 | + | 8 | 13 | 299_329 | 321 | 1109 | DNA |
Tgene | MEIS1 | chr9:6793134 | chr2:66794583 | ENST00000398506 | + | 7 | 11 | 299_329 | 319 | 464 | DNA |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for KDM4C_MEIS1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KDM4C_MEIS1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | KDM4C | C0025149 | Medulloblastoma | 1 | CTD_human |
Hgene | KDM4C | C0236663 | Alcohol withdrawal syndrome | 1 | PSYGENET |
Tgene | MEIS1 | C0035258 | Restless Legs Syndrome | 1 | CTD_human |
Tgene | MEIS1 | C1458155 | Mammary Neoplasms | 1 | CTD_human |