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Fusion gene ID: 18325 |
FusionGeneSummary for KCNQ1_GALNTL6 |
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Fusion gene information | Fusion gene name: KCNQ1_GALNTL6 | Fusion gene ID: 18325 | Hgene | Tgene | Gene symbol | KCNQ1 | GALNTL6 | Gene ID | 3784 | 442117 |
Gene name | potassium voltage-gated channel subfamily Q member 1 | polypeptide N-acetylgalactosaminyltransferase like 6 | |
Synonyms | ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS | GALNACT20|GALNT17|GalNAc-T6L | |
Cytomap | 11p15.5-p15.4 | 4q34.1 | |
Type of gene | protein-coding | protein-coding | |
Description | potassium voltage-gated channel subfamily KQT member 1IKs producing slow voltage-gated potassium channel subunit alpha KvLQT1kidney and cardiac voltage dependend K+ channelpotassium channel, voltage gated KQT-like subfamily Q, member 1potassium voltag | polypeptide N-acetylgalactosaminyltransferase-like 6GaNTase 17GalNAc transferase 17UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 17UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 20UDP-N-acetyl-alpha-D-gala | |
Modification date | 20180527 | 20180523 | |
UniProtAcc | P51787 | Q49A17 | |
Ensembl transtripts involved in fusion gene | ENST00000155840, ENST00000335475, ENST00000526095, | ENST00000506823, ENST00000508122, ENST00000457021, ENST00000511251, | |
Fusion gene scores | * DoF score | 12 X 8 X 8=768 | 7 X 5 X 7=245 |
# samples | 12 | 7 | |
** MAII score | log2(12/768*10)=-2.67807190511264 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/245*10)=-1.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: KCNQ1 [Title/Abstract] AND GALNTL6 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | KCNQ1 | GO:0035690 | cellular response to drug | 9108097 |
Hgene | KCNQ1 | GO:0060306 | regulation of membrane repolarization | 11299204 |
Hgene | KCNQ1 | GO:0071320 | cellular response to cAMP | 11299204|16002409 |
Hgene | KCNQ1 | GO:0071435 | potassium ion export | 8900283|10400998 |
Hgene | KCNQ1 | GO:0071805 | potassium ion transmembrane transport | 9354802|11299204|16002409 |
Hgene | KCNQ1 | GO:0086011 | membrane repolarization during action potential | 8900283|11299204|19646991 |
Hgene | KCNQ1 | GO:0097623 | potassium ion export across plasma membrane | 17289006 |
Hgene | KCNQ1 | GO:1901381 | positive regulation of potassium ion transmembrane transport | 8900283 |
Tgene | GALNTL6 | GO:0018243 | protein O-linked glycosylation via threonine | 22186971 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | COAD | TCGA-D5-5538-01A | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000155840 | ENST00000506823 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
In-frame | ENST00000155840 | ENST00000508122 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
5CDS-intron | ENST00000155840 | ENST00000457021 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
5CDS-intron | ENST00000155840 | ENST00000511251 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
In-frame | ENST00000335475 | ENST00000506823 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
In-frame | ENST00000335475 | ENST00000508122 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
5CDS-intron | ENST00000335475 | ENST00000457021 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
5CDS-intron | ENST00000335475 | ENST00000511251 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
3UTR-3CDS | ENST00000526095 | ENST00000506823 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
3UTR-3CDS | ENST00000526095 | ENST00000508122 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
3UTR-intron | ENST00000526095 | ENST00000457021 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
3UTR-intron | ENST00000526095 | ENST00000511251 | KCNQ1 | chr11 | 2799267 | + | GALNTL6 | chr4 | 173930329 | + |
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FusionProtFeatures for KCNQ1_GALNTL6 |
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Hgene | Tgene |
KCNQ1 | GALNTL6 |
Catalyzes the initial reaction in O-linkedoligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on theprotein receptor. {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 300_320 | 598 | 677 | Intramembrane | Pore-forming%3B Name%3DSegment H5 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 300_320 | 471 | 550 | Intramembrane | Pore-forming%3B Name%3DSegment H5 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 312_317 | 598 | 677 | Motif | Selectivity filter |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 312_317 | 471 | 550 | Motif | Selectivity filter |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 143_147 | 598 | 677 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 169_196 | 598 | 677 | Topological domain | Cytoplasmic |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 1_121 | 598 | 677 | Topological domain | Cytoplasmic |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 218_225 | 598 | 677 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 249_261 | 598 | 677 | Topological domain | Cytoplasmic |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 283_299 | 598 | 677 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 321_327 | 598 | 677 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 143_147 | 471 | 550 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 169_196 | 471 | 550 | Topological domain | Cytoplasmic |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 1_121 | 471 | 550 | Topological domain | Cytoplasmic |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 218_225 | 471 | 550 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 249_261 | 471 | 550 | Topological domain | Cytoplasmic |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 283_299 | 471 | 550 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 321_327 | 471 | 550 | Topological domain | Extracellular |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 122_142 | 598 | 677 | Transmembrane | Helical%3B Name%3DSegment S1 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 148_168 | 598 | 677 | Transmembrane | Helical%3B Name%3DSegment S2 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 197_217 | 598 | 677 | Transmembrane | Helical%3B Name%3DSegment S3 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 226_248 | 598 | 677 | Transmembrane | Helical%3B Voltage-sensor%3B Name%3DSegment S4 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 262_282 | 598 | 677 | Transmembrane | Helical%3B Name%3DSegment S5 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 328_348 | 598 | 677 | Transmembrane | Helical%3B Name%3DSegment S6 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 122_142 | 471 | 550 | Transmembrane | Helical%3B Name%3DSegment S1 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 148_168 | 471 | 550 | Transmembrane | Helical%3B Name%3DSegment S2 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 197_217 | 471 | 550 | Transmembrane | Helical%3B Name%3DSegment S3 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 226_248 | 471 | 550 | Transmembrane | Helical%3B Voltage-sensor%3B Name%3DSegment S4 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 262_282 | 471 | 550 | Transmembrane | Helical%3B Name%3DSegment S5 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 328_348 | 471 | 550 | Transmembrane | Helical%3B Name%3DSegment S6 |
Tgene | >GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000508122 | + | 8 | 12 | 453_585 | 440 | 585 | Domain | Ricin B-type lectin |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 585_621 | 598 | 677 | Coiled coil | Ontology_term=ECO:0000269 |
Hgene | >KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 585_621 | 471 | 550 | Coiled coil | Ontology_term=ECO:0000269 |
Hgene | >KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 589_620 | 598 | 677 | Region | C-terminal assembly domain |
Hgene | >KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 589_620 | 471 | 550 | Region | C-terminal assembly domain |
Hgene | >KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 349_676 | 598 | 677 | Topological domain | Cytoplasmic |
Hgene | >KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 349_676 | 471 | 550 | Topological domain | Cytoplasmic |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000506823 | + | 9 | 13 | 453_585 | 457 | 602 | Domain | Ricin B-type lectin |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000506823 | + | 9 | 13 | 139_248 | 457 | 602 | Region | Note=Catalytic subdomain A |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000506823 | + | 9 | 13 | 306_368 | 457 | 602 | Region | Note=Catalytic subdomain B |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000508122 | + | 8 | 12 | 139_248 | 440 | 585 | Region | Note=Catalytic subdomain A |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000508122 | + | 8 | 12 | 306_368 | 440 | 585 | Region | Note=Catalytic subdomain B |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000506823 | + | 9 | 13 | 1_7 | 457 | 602 | Topological domain | Cytoplasmic |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000506823 | + | 9 | 13 | 29_601 | 457 | 602 | Topological domain | Lumenal |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000508122 | + | 8 | 12 | 1_7 | 440 | 585 | Topological domain | Cytoplasmic |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000508122 | + | 8 | 12 | 29_601 | 440 | 585 | Topological domain | Lumenal |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000506823 | + | 9 | 13 | 8_28 | 457 | 602 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | GALNTL6 | chr11:2799267 | chr4:173930329 | ENST00000508122 | + | 8 | 12 | 8_28 | 440 | 585 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
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FusionGeneSequence for KCNQ1_GALNTL6 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_KCNQ1_ENST00000155840_chr11_2799267_+_GALNTL6_ENST00000506823_chr4_173930329_+_743aa MAAASSPPRAERKRWGWGRLPGARRGSAGLAKKCPFSLELAEGGPAGGALYAPIAPGAPGPAPPASPAAPAAPPVASDLGPRPPVSLDPR VSIYSTRRPVLARTHVQGRVYNFLERPTGWKCFVYHFAVFLIVLVCLIFSVLSTIEQYAALATGTLFWMEIVLVVFFGTEYVVRLWSAGC RSKYVGLWGRLRFARKPISIIDLIVVVASMVVLCVGSKGQVFATSAIRGIRFLQILRMLHVDRQGGTWRLLGSVVFIHRQELITTLYIGF LGLIFSSYFVYLAEKDAVNESGRVEFGSYADALWWGVVTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAGILGSGFALKVQQKQR QKHFNRQIPAAASLIQTAWRCYAAENPDSSTWKIYIRKAPRSHTLLSPSPKPKKSVVVKKKKFKLDKDNGVTPGEKMLTVPHITCDPPEE RRLDHFSVDGYDSSVRKSPTLLEVSMPHFMRTNSFAEDLDLEGETLLTPITHISQLREHHRATIKVIRRMQYFVAKKKFQQARKPYDVRD VIEQYSQGHLNLMVRIKELQRRLDQSIGKPSLFISVSEKSKDRGSNTIGARLNRVEDKIRNVAANLCVDSKHGATGTELRLDICVKDGSE RTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHNSPVTLYDCHGMKGNQLWGYRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSET >In-frame_KCNQ1_ENST00000155840_chr11_2799267_+_GALNTL6_ENST00000508122_chr4_173930329_+_743aa MAAASSPPRAERKRWGWGRLPGARRGSAGLAKKCPFSLELAEGGPAGGALYAPIAPGAPGPAPPASPAAPAAPPVASDLGPRPPVSLDPR VSIYSTRRPVLARTHVQGRVYNFLERPTGWKCFVYHFAVFLIVLVCLIFSVLSTIEQYAALATGTLFWMEIVLVVFFGTEYVVRLWSAGC RSKYVGLWGRLRFARKPISIIDLIVVVASMVVLCVGSKGQVFATSAIRGIRFLQILRMLHVDRQGGTWRLLGSVVFIHRQELITTLYIGF LGLIFSSYFVYLAEKDAVNESGRVEFGSYADALWWGVVTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAGILGSGFALKVQQKQR QKHFNRQIPAAASLIQTAWRCYAAENPDSSTWKIYIRKAPRSHTLLSPSPKPKKSVVVKKKKFKLDKDNGVTPGEKMLTVPHITCDPPEE RRLDHFSVDGYDSSVRKSPTLLEVSMPHFMRTNSFAEDLDLEGETLLTPITHISQLREHHRATIKVIRRMQYFVAKKKFQQARKPYDVRD VIEQYSQGHLNLMVRIKELQRRLDQSIGKPSLFISVSEKSKDRGSNTIGARLNRVEDKIRNVAANLCVDSKHGATGTELRLDICVKDGSE RTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHNSPVTLYDCHGMKGNQLWGYRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSET >In-frame_KCNQ1_ENST00000335475_chr11_2799267_+_GALNTL6_ENST00000506823_chr4_173930329_+_616aa MDFLIVLVCLIFSVLSTIEQYAALATGTLFWMEIVLVVFFGTEYVVRLWSAGCRSKYVGLWGRLRFARKPISIIDLIVVVASMVVLCVGS KGQVFATSAIRGIRFLQILRMLHVDRQGGTWRLLGSVVFIHRQELITTLYIGFLGLIFSSYFVYLAEKDAVNESGRVEFGSYADALWWGV VTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAGILGSGFALKVQQKQRQKHFNRQIPAAASLIQTAWRCYAAENPDSSTWKIYIR KAPRSHTLLSPSPKPKKSVVVKKKKFKLDKDNGVTPGEKMLTVPHITCDPPEERRLDHFSVDGYDSSVRKSPTLLEVSMPHFMRTNSFAE DLDLEGETLLTPITHISQLREHHRATIKVIRRMQYFVAKKKFQQARKPYDVRDVIEQYSQGHLNLMVRIKELQRRLDQSIGKPSLFISVS EKSKDRGSNTIGARLNRVEDKIRNVAANLCVDSKHGATGTELRLDICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHNS >In-frame_KCNQ1_ENST00000335475_chr11_2799267_+_GALNTL6_ENST00000508122_chr4_173930329_+_616aa MDFLIVLVCLIFSVLSTIEQYAALATGTLFWMEIVLVVFFGTEYVVRLWSAGCRSKYVGLWGRLRFARKPISIIDLIVVVASMVVLCVGS KGQVFATSAIRGIRFLQILRMLHVDRQGGTWRLLGSVVFIHRQELITTLYIGFLGLIFSSYFVYLAEKDAVNESGRVEFGSYADALWWGV VTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAGILGSGFALKVQQKQRQKHFNRQIPAAASLIQTAWRCYAAENPDSSTWKIYIR KAPRSHTLLSPSPKPKKSVVVKKKKFKLDKDNGVTPGEKMLTVPHITCDPPEERRLDHFSVDGYDSSVRKSPTLLEVSMPHFMRTNSFAE DLDLEGETLLTPITHISQLREHHRATIKVIRRMQYFVAKKKFQQARKPYDVRDVIEQYSQGHLNLMVRIKELQRRLDQSIGKPSLFISVS EKSKDRGSNTIGARLNRVEDKIRNVAANLCVDSKHGATGTELRLDICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHNS |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_KCNQ1_ENST00000155840_chr11_2799267_+_GALNTL6_ENST00000506823_chr4_173930329_+_2229nt ATGGCCGCGGCCTCCTCCCCGCCCAGGGCCGAGAGGAAGCGCTGGGGTTGGGGCCGCCTGCCAGGCGCCCGGCGGGGCAGCGCGGGCCTG GCCAAGAAGTGCCCCTTCTCGCTGGAGCTGGCGGAGGGCGGCCCGGCGGGCGGCGCGCTCTACGCGCCCATCGCGCCCGGCGCCCCAGGT CCCGCGCCCCCTGCGTCCCCGGCCGCGCCCGCCGCGCCCCCAGTTGCCTCCGACCTTGGCCCGCGGCCGCCGGTGAGCCTAGACCCGCGC GTCTCCATCTACAGCACGCGCCGCCCGGTGTTGGCGCGCACCCACGTCCAGGGCCGCGTCTACAACTTCCTCGAGCGTCCCACCGGCTGG AAATGCTTCGTTTACCACTTCGCCGTCTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCC CTGGCCACGGGGACTCTCTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGC CGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATCGTGGTCGTGGCCTCCATG GTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACAC GTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTC CTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCA GATGCGCTGTGGTGGGGGGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCC TGCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGG CAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCC ACCTGGAAGATCTACATCCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAA AAAAAGTTCAAGCTGGACAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAG CGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGAGCATGCCCCATTTCATG AGAACCAACAGCTTCGCCGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCAT CGGGCCACCATTAAGGTCATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGAC GTCATTGAGCAGTACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCC TCACTGTTCATCTCCGTCTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGATCCGA AATGTGGCAGCAAATCTCTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAA AGAACATGGTCTCATGAACAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTT GATGCGATCTCACACAACAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGACAGAACA TTATTCCATCCTGTGAGCAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACT >In-frame_KCNQ1_ENST00000155840_chr11_2799267_+_GALNTL6_ENST00000508122_chr4_173930329_+_2229nt ATGGCCGCGGCCTCCTCCCCGCCCAGGGCCGAGAGGAAGCGCTGGGGTTGGGGCCGCCTGCCAGGCGCCCGGCGGGGCAGCGCGGGCCTG GCCAAGAAGTGCCCCTTCTCGCTGGAGCTGGCGGAGGGCGGCCCGGCGGGCGGCGCGCTCTACGCGCCCATCGCGCCCGGCGCCCCAGGT CCCGCGCCCCCTGCGTCCCCGGCCGCGCCCGCCGCGCCCCCAGTTGCCTCCGACCTTGGCCCGCGGCCGCCGGTGAGCCTAGACCCGCGC GTCTCCATCTACAGCACGCGCCGCCCGGTGTTGGCGCGCACCCACGTCCAGGGCCGCGTCTACAACTTCCTCGAGCGTCCCACCGGCTGG AAATGCTTCGTTTACCACTTCGCCGTCTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCC CTGGCCACGGGGACTCTCTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGC CGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATCGTGGTCGTGGCCTCCATG GTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACAC GTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTC CTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCA GATGCGCTGTGGTGGGGGGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCC TGCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGG CAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCC ACCTGGAAGATCTACATCCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAA AAAAAGTTCAAGCTGGACAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAG CGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGAGCATGCCCCATTTCATG AGAACCAACAGCTTCGCCGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCAT CGGGCCACCATTAAGGTCATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGAC GTCATTGAGCAGTACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCC TCACTGTTCATCTCCGTCTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGATCCGA AATGTGGCAGCAAATCTCTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAA AGAACATGGTCTCATGAACAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTT GATGCGATCTCACACAACAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGACAGAACA TTATTCCATCCTGTGAGCAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACT >In-frame_KCNQ1_ENST00000335475_chr11_2799267_+_GALNTL6_ENST00000506823_chr4_173930329_+_1848nt ATGGACTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCCCTGGCCACGGGGACTCTCTTC TGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGGCCTC TGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCC AAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACC TGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCG TACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTG GTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGCCATC TCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAG ATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGG AAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTGGACAAA GACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAGCGGCGGCTGGACCACTTCTCT GTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGAGCATGCCCCATTTCATGAGAACCAACAGCTTCGCCGAG GACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCATCGGGCCACCATTAAGGTCATT CGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCAGTACTCGCAG GGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGTCTCA GAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGATCCGAAATGTGGCAGCAAATCTCTGT GTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAAAGAACATGGTCTCATGAACAG CTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTTGATGCGATCTCACACAACAGC CCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGACAGAACATTATTCCATCCTGTGAGCAAC AGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACTCAGCAGTGGATTTTTGAACAC >In-frame_KCNQ1_ENST00000335475_chr11_2799267_+_GALNTL6_ENST00000508122_chr4_173930329_+_1848nt ATGGACTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCCCTGGCCACGGGGACTCTCTTC TGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGGCCTC TGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCC AAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACC TGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCG TACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTG GTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGCCATC TCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAG ATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGG AAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTGGACAAA GACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAGCGGCGGCTGGACCACTTCTCT GTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGAGCATGCCCCATTTCATGAGAACCAACAGCTTCGCCGAG GACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCATCGGGCCACCATTAAGGTCATT CGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCAGTACTCGCAG GGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGTCTCA GAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGATCCGAAATGTGGCAGCAAATCTCTGT GTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAAAGAACATGGTCTCATGAACAG CTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTTGATGCGATCTCACACAACAGC CCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGACAGAACATTATTCCATCCTGTGAGCAAC AGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACTCAGCAGTGGATTTTTGAACAC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_KCNQ1_ENST00000155840_chr11_2799267_+_GALNTL6_ENST00000506823_chr4_173930329_+_3796nt GCGGCGGGGCTGGCAGCAGTGGCTGCCCGCACTGCGCCCGGGCGCTCGCCTTCGCTGCAGCTCCCGGTGCCGCCGCTCGGGCCGGCCCCC CGGCAGGCCCTCCTCGTTATGGCCGCGGCCTCCTCCCCGCCCAGGGCCGAGAGGAAGCGCTGGGGTTGGGGCCGCCTGCCAGGCGCCCGG CGGGGCAGCGCGGGCCTGGCCAAGAAGTGCCCCTTCTCGCTGGAGCTGGCGGAGGGCGGCCCGGCGGGCGGCGCGCTCTACGCGCCCATC GCGCCCGGCGCCCCAGGTCCCGCGCCCCCTGCGTCCCCGGCCGCGCCCGCCGCGCCCCCAGTTGCCTCCGACCTTGGCCCGCGGCCGCCG GTGAGCCTAGACCCGCGCGTCTCCATCTACAGCACGCGCCGCCCGGTGTTGGCGCGCACCCACGTCCAGGGCCGCGTCTACAACTTCCTC GAGCGTCCCACCGGCTGGAAATGCTTCGTTTACCACTTCGCCGTCTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACC ATCGAGCAGTATGCCGCCCTGGCCACGGGGACTCTCTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGC CTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATC GTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAG ATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACC ACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTG GAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTC GGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAG GTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCC GAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAG TCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTGGACAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACG TGCGACCCCCCAGAAGAGCGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTG AGCATGCCCCATTTCATGAGAACCAACAGCTTCGCCGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCA CAGCTGCGGGAACACCATCGGGCCACCATTAAGGTCATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAG CCTTACGATGTGCGGGACGTCATTGAGCAGTACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGAC CAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGTCTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGA GTAGAAGACAAGATCCGAAATGTGGCAGCAAATCTCTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGT GTCAAGGATGGTTCTGAAAGAACATGGTCTCATGAACAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCAT ACCCGGAAATTCTGCTTTGATGCGATCTCACACAACAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGA TACCGGAAGGACAGAACATTATTCCATCCTGTGAGCAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGT GACCCTCTCTCTGAGACTCAGCAGTGGATTTTTGAACACATTAATATGACTGTTTTAGAAAAATTTAACCACCATGCCAACTCCTAGAAA GAAGAAAGGAAGAAAGAGTGATTACCTACAGGTTATAAATTAAATTTTAGCCAGCATCTGGGTCGAAGGAGTCAGGAATAACATTTCCTC GATCCAGGAAGGCTGGTTTAAAAATTTGCAAATGCCATGTCAAAGTAGGTTGTTTTGAAGAACTTCCTGCATCTGAAGAACTTGGCTGAG AATCTCACCAGCTGCTTCTGAGAACTCGAGACTAGCAGTTCCCTTGCTGGCCAAGGGCAAAGATAATTTAGGGACTTTTCAAAACAACTG CTGAGCTAATAAATCCTAGCATTTCTCAGGTCAAATCCTGCAGTAGTGAGTAGCTATGAATGGATCCTATTAACTGGGTGGGAGGGGGGT GAAAATGGAGTGCATGACTGCTCTGACAACCTGAGGATATCACAGGTTTAGAACTAGCCAAGCTTAAGGGGTGAGCTGTACTCTTTGGTG CCATTCTCTGACTAAGAATGGGTTCAGCAGGTTTAACCCTTAAAAGTGCTGCAGATGATTTCAGAGTGCTCACACTATTCTGTTTTTTTT ATTTTTATTTTTAAATGAGGGTGCAATATCTAATGTAAGACTTAAATTACATAATGAAATGGACATCCAGTGTTCCCATTCTTTCGTTTA TATTTGCCATTTTTTTTTCAGAGCAAAGTTTCTTTTTTATGAAAGTTCATGCTCCATGAATCCACTGAATTTCTAATTCAGTGCCCTTCT ATGAATCCAGTTAAAAACAAAAGCAAAAGCAAAAATCTATGCTATCAAGTTACTCCAAAGAAAGATTTCACAGAAGCAGCAAAACCATAT AAGATTTAGGAGAGGGACTTCCCTGGGAAATCTATTTTTACTTTTCTATTATTTTTAAAATCTTAAAAGTCTGATATTTGTCCAGTCATA ATTTTTATTAAGCAAGGAAATGGAGTGAGTTTGATGTAATTTGTTTAGGAGATTCTTAAACCCAAATAAATCTACACTCCAAGTGATATG TGAAAATGGCTTAGTTCACTTCAATTCTGTTTAGTCAGTGGTGGGAGCTTAGAAGTGGTTTTATTTGTTCGTTTGTTTGGGTTTTGCTTT TGTTTTTTATTTTTTTCTTGTTTTTTTTTTGTAGTGTTGAATTAATGATGTTCTTTTATTTGGAAGCTCATAAAAGGAATTACCATTAAT AAAGTGTTTCTGACACCATTTTCTGTTAATGGGACAATATTTCGGGGATGAAGAAAGGAATGCTCCGAAAACTAAATGGAACACTTAATC CTTAAAGCAATTTTTTACTGTTCAATAATATCACATTGGGGGAAGAAAACACAGGTATCAAGGTGGTTCTTGGGAAAAAAGAATCATGTT TATTATATATCTCTCAAGTTTTTTTGGTATAAAAATGTTTTAACTTTGCTTTCTTTTTGGTTTTTGTTTGAAGTTGGTTTTCCTGTTAAT >In-frame_KCNQ1_ENST00000155840_chr11_2799267_+_GALNTL6_ENST00000508122_chr4_173930329_+_2337nt GCGGCGGGGCTGGCAGCAGTGGCTGCCCGCACTGCGCCCGGGCGCTCGCCTTCGCTGCAGCTCCCGGTGCCGCCGCTCGGGCCGGCCCCC CGGCAGGCCCTCCTCGTTATGGCCGCGGCCTCCTCCCCGCCCAGGGCCGAGAGGAAGCGCTGGGGTTGGGGCCGCCTGCCAGGCGCCCGG CGGGGCAGCGCGGGCCTGGCCAAGAAGTGCCCCTTCTCGCTGGAGCTGGCGGAGGGCGGCCCGGCGGGCGGCGCGCTCTACGCGCCCATC GCGCCCGGCGCCCCAGGTCCCGCGCCCCCTGCGTCCCCGGCCGCGCCCGCCGCGCCCCCAGTTGCCTCCGACCTTGGCCCGCGGCCGCCG GTGAGCCTAGACCCGCGCGTCTCCATCTACAGCACGCGCCGCCCGGTGTTGGCGCGCACCCACGTCCAGGGCCGCGTCTACAACTTCCTC GAGCGTCCCACCGGCTGGAAATGCTTCGTTTACCACTTCGCCGTCTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACC ATCGAGCAGTATGCCGCCCTGGCCACGGGGACTCTCTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGC CTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATC GTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAG ATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACC ACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTG GAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTC GGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAG GTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCC GAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAG TCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTGGACAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACG TGCGACCCCCCAGAAGAGCGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTG AGCATGCCCCATTTCATGAGAACCAACAGCTTCGCCGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCA CAGCTGCGGGAACACCATCGGGCCACCATTAAGGTCATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAG CCTTACGATGTGCGGGACGTCATTGAGCAGTACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGAC CAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGTCTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGA GTAGAAGACAAGATCCGAAATGTGGCAGCAAATCTCTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGT GTCAAGGATGGTTCTGAAAGAACATGGTCTCATGAACAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCAT ACCCGGAAATTCTGCTTTGATGCGATCTCACACAACAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGA TACCGGAAGGACAGAACATTATTCCATCCTGTGAGCAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGT >In-frame_KCNQ1_ENST00000335475_chr11_2799267_+_GALNTL6_ENST00000506823_chr4_173930329_+_3581nt CTCTTCCCTTCCTCCCCTGCAGCTTCCATGGCCTGGGGCTGTGAGAGGCCCGGGAAGGCACTGTCTTTGCGCCTGCACATGTGTGTGTCT GGAGTGTAGGATGGCACTGGTGCCGGGCCTGGATTTACTCAGCCCAGATCACGGCTGCTTTTGTTTACGTGGCCCCTGCTCTCACCCACA ACTCCAGGTTTCTGGCTCTCGGGAATTTGAGGCCTGTGGCTGCTGTGGACCCTGGGAAAGAGCCTGTGCTTCCTGAGCCAGTGCGGGGCC TGGCATGGACTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCCCTGGCCACGGGGACTCT CTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGG CCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGG CTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGG CACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTC CTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGG GGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGC CATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCG GCAGATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACAT CCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTGGA CAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAGCGGCGGCTGGACCACTT CTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGAGCATGCCCCATTTCATGAGAACCAACAGCTTCGC CGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCATCGGGCCACCATTAAGGT CATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCAGTACTC GCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGT CTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGATCCGAAATGTGGCAGCAAATCT CTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAAAGAACATGGTCTCATGA ACAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTTGATGCGATCTCACACAA CAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGACAGAACATTATTCCATCCTGTGAG CAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACTCAGCAGTGGATTTTTGA ACACATTAATATGACTGTTTTAGAAAAATTTAACCACCATGCCAACTCCTAGAAAGAAGAAAGGAAGAAAGAGTGATTACCTACAGGTTA TAAATTAAATTTTAGCCAGCATCTGGGTCGAAGGAGTCAGGAATAACATTTCCTCGATCCAGGAAGGCTGGTTTAAAAATTTGCAAATGC CATGTCAAAGTAGGTTGTTTTGAAGAACTTCCTGCATCTGAAGAACTTGGCTGAGAATCTCACCAGCTGCTTCTGAGAACTCGAGACTAG CAGTTCCCTTGCTGGCCAAGGGCAAAGATAATTTAGGGACTTTTCAAAACAACTGCTGAGCTAATAAATCCTAGCATTTCTCAGGTCAAA TCCTGCAGTAGTGAGTAGCTATGAATGGATCCTATTAACTGGGTGGGAGGGGGGTGAAAATGGAGTGCATGACTGCTCTGACAACCTGAG GATATCACAGGTTTAGAACTAGCCAAGCTTAAGGGGTGAGCTGTACTCTTTGGTGCCATTCTCTGACTAAGAATGGGTTCAGCAGGTTTA ACCCTTAAAAGTGCTGCAGATGATTTCAGAGTGCTCACACTATTCTGTTTTTTTTATTTTTATTTTTAAATGAGGGTGCAATATCTAATG TAAGACTTAAATTACATAATGAAATGGACATCCAGTGTTCCCATTCTTTCGTTTATATTTGCCATTTTTTTTTCAGAGCAAAGTTTCTTT TTTATGAAAGTTCATGCTCCATGAATCCACTGAATTTCTAATTCAGTGCCCTTCTATGAATCCAGTTAAAAACAAAAGCAAAAGCAAAAA TCTATGCTATCAAGTTACTCCAAAGAAAGATTTCACAGAAGCAGCAAAACCATATAAGATTTAGGAGAGGGACTTCCCTGGGAAATCTAT TTTTACTTTTCTATTATTTTTAAAATCTTAAAAGTCTGATATTTGTCCAGTCATAATTTTTATTAAGCAAGGAAATGGAGTGAGTTTGAT GTAATTTGTTTAGGAGATTCTTAAACCCAAATAAATCTACACTCCAAGTGATATGTGAAAATGGCTTAGTTCACTTCAATTCTGTTTAGT CAGTGGTGGGAGCTTAGAAGTGGTTTTATTTGTTCGTTTGTTTGGGTTTTGCTTTTGTTTTTTATTTTTTTCTTGTTTTTTTTTTGTAGT GTTGAATTAATGATGTTCTTTTATTTGGAAGCTCATAAAAGGAATTACCATTAATAAAGTGTTTCTGACACCATTTTCTGTTAATGGGAC AATATTTCGGGGATGAAGAAAGGAATGCTCCGAAAACTAAATGGAACACTTAATCCTTAAAGCAATTTTTTACTGTTCAATAATATCACA TTGGGGGAAGAAAACACAGGTATCAAGGTGGTTCTTGGGAAAAAAGAATCATGTTTATTATATATCTCTCAAGTTTTTTTGGTATAAAAA >In-frame_KCNQ1_ENST00000335475_chr11_2799267_+_GALNTL6_ENST00000508122_chr4_173930329_+_2122nt CTCTTCCCTTCCTCCCCTGCAGCTTCCATGGCCTGGGGCTGTGAGAGGCCCGGGAAGGCACTGTCTTTGCGCCTGCACATGTGTGTGTCT GGAGTGTAGGATGGCACTGGTGCCGGGCCTGGATTTACTCAGCCCAGATCACGGCTGCTTTTGTTTACGTGGCCCCTGCTCTCACCCACA ACTCCAGGTTTCTGGCTCTCGGGAATTTGAGGCCTGTGGCTGCTGTGGACCCTGGGAAAGAGCCTGTGCTTCCTGAGCCAGTGCGGGGCC TGGCATGGACTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCCCTGGCCACGGGGACTCT CTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGG CCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTCATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGG CTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGG CACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTC CTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGG GGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGC CATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCG GCAGATCCCGGCGGCAGCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACAT CCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTGGA CAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAGCGGCGGCTGGACCACTT CTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGAGCATGCCCCATTTCATGAGAACCAACAGCTTCGC CGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCATCGGGCCACCATTAAGGT CATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCAGTACTC GCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGT CTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGATCCGAAATGTGGCAGCAAATCT CTGTGTGGACAGCAAGCATGGAGCCACCGGAACAGAGCTGAGGCTGGACATCTGTGTCAAGGATGGTTCTGAAAGAACATGGTCTCATGA ACAGCTTTTTACCTTTGGATGGAGAGAAGATATTCGACCCGGTGAGCCACTGCATACCCGGAAATTCTGCTTTGATGCGATCTCACACAA CAGCCCCGTTACACTCTATGACTGTCATGGCATGAAGGGGAACCAGCTCTGGGGATACCGGAAGGACAGAACATTATTCCATCCTGTGAG CAACAGCTGCATGGATTGCAACCCCGCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTCTCTGAGACTCAGCAGTGGATTTTTGA |
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FusionGenePPI for KCNQ1_GALNTL6 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
KCNQ1 | TRAF6, AKAP9, PRKAR2A, PPP1CA, PRKACA, KCNE1, KCNE2, KCNQ2, HSPA4, NEDD4, USP2, AP2M1, NEDD4L, ATP4A, EGFR, BACE1 | GALNTL6 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 535_572 | 598 | 677 | KCNE1 C-terminus |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000155840 | + | 15 | 16 | 588_616 | 598 | 677 | AKAP9 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 588_616 | 471 | 550 | AKAP9 |
Hgene | KCNQ1 | chr11:2799267 | chr4:173930329 | ENST00000335475 | + | 15 | 16 | 535_572 | 471 | 550 | KCNE1 C-terminus |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for KCNQ1_GALNTL6 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | KCNQ1 | P51787 | DB00808 | Indapamide | Potassium voltage-gated channel subfamily KQT member 1 {ECO:0000305} | small molecule | approved |
Hgene | KCNQ1 | P51787 | DB11633 | Isavuconazole | Potassium voltage-gated channel subfamily KQT member 1 {ECO:0000305} | small molecule | approved|investigational |
Hgene | KCNQ1 | P51787 | DB01244 | Bepridil | Potassium voltage-gated channel subfamily KQT member 1 {ECO:0000305} | small molecule | approved|withdrawn |
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RelatedDiseases for KCNQ1_GALNTL6 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | KCNQ1 | C0035828 | Romano-Ward Syndrome | 36 | CTD_human;ORPHANET;UNIPROT |
Hgene | KCNQ1 | C0022387 | Jervell-Lange Nielsen Syndrome | 9 | CTD_human;ORPHANET;UNIPROT |
Hgene | KCNQ1 | C0023976 | Long QT Syndrome | 7 | CTD_human |
Hgene | KCNQ1 | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 3 | CTD_human |
Hgene | KCNQ1 | C0001418 | Adenocarcinoma | 1 | CTD_human |
Hgene | KCNQ1 | C0018781 | Noise-induced hearing loss | 1 | CTD_human |
Hgene | KCNQ1 | C0021841 | Intestinal Neoplasms | 1 | CTD_human |
Hgene | KCNQ1 | C1837014 | Atrial Fibrillation, Familial, 3 | 1 | CTD_human;UNIPROT |
Hgene | KCNQ1 | C1865019 | SHORT QT SYNDROME 2 (disorder) | 1 | CTD_human;UNIPROT |