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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 16903

FusionGeneSummary for HSPB1_TYK2

check button Fusion gene summary
Fusion gene informationFusion gene name: HSPB1_TYK2
Fusion gene ID: 16903
HgeneTgene
Gene symbol

HSPB1

TYK2

Gene ID

3315

7297

Gene nameheat shock protein family B (small) member 1tyrosine kinase 2
SynonymsCMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27IMD35|JTK1
Cytomap

7q11.23

19p13.2

Type of geneprotein-codingprotein-coding
Descriptionheat shock protein beta-128 kDa heat shock proteinepididymis secretory protein Li 102estrogen-regulated 24 kDa proteinheat shock 27 kDa proteinheat shock 27kD protein 1heat shock 27kDa protein 1stress-responsive protein 27non-receptor tyrosine-protein kinase TYK2
Modification date2018052720180522
UniProtAcc

P04792

P29597

Ensembl transtripts involved in fusion geneENST00000248553, ENST00000429938, 
ENST00000264818, ENST00000524462, 
ENST00000525621, ENST00000529370, 
ENST00000529422, 
Fusion gene scores* DoF score20 X 13 X 6=156042 X 7 X 17=4998
# samples 2143
** MAII scorelog2(21/1560*10)=-2.89308479608349
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(43/4998*10)=-3.53894233649724
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: HSPB1 [Title/Abstract] AND TYK2 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVKICHTCGA-KM-8442-01AHSPB1chr7

75933612

+TYK2chr19

10491352

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000248553ENST00000264818HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000248553ENST00000524462HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000248553ENST00000525621HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000248553ENST00000529370HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000248553ENST00000529422HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000429938ENST00000264818HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000429938ENST00000524462HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000429938ENST00000525621HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000429938ENST00000529370HSPB1chr7

75933612

+TYK2chr19

10491352

-
5CDS-intronENST00000429938ENST00000529422HSPB1chr7

75933612

+TYK2chr19

10491352

-

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FusionProtFeatures for HSPB1_TYK2


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
HSPB1

P04792

TYK2

P29597

Probably involved in intracellular signal transductionby being involved in the initiation of type I IFN signaling.Phosphorylates the interferon-alpha/beta receptor alpha chain.{ECO:0000269|PubMed:7526154}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for HSPB1_TYK2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for HSPB1_TYK2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
HSPB1HSPB8, MAGED1, ILK, IGSF21, PPA1, MED31, RBM48, LRIF1, TP53, AKT1, MAPKAPK2, CRYAB, CYCS, MAPKAPK5, CRYAA, CRYBB2, HNRNPD, TGFB1I1, USP38, USP1, DMWD, SRRM2, PRKD1, UBC, MYC, G6PD, GATA1, UCHL5, YWHAQ, MME, UBE2I, HSF1, TNF, UNG, STAT2, HDAC6, CASP3, PRKCD, SNCA, CUL3, COPS5, ISG15, CRYGC, PHLDA1, SMN1, DAXX, SMURF2, PNPT1, PUM1, PALLD, NRD1, PEX19, CRK, TPM3, RNF114, CFTR, CHUK, IKBKB, VCP, FN1, VCAM1, SF3B3, EFTUD2, PRPF19, MFAP1, HSPB1, WDR83, ATF2, IQCB1, NOS2, UBL4A, ITGA4, CS, INS, MAPKAPK3, PLG, NPM1, SOX2, LBP, PPM1A, SMARCD1, SERTAD1, ESR1, RPA1, RPA2, RPA3, WWOX, ASB4, ASB6, ASB10, ASB17, ZBTB1, MAP3K7, AARSD1, BAG3, LCE3A, IRS4, HAUS1, CEP57, HUWE1, PCSK9, EZH2, AATK, ARAF, BUB1B, IRAK1, LIMK2, SIK2, SRMS, TYK2, BTRC, HSPB6, HNRNPA1, ACBD6, ACTN1, ACTN4, ADCY9, ADPRHL2, AGAP5, AGAP4, ALPI, ANK1, ANXA1, SLC7A9, C11orf98, C15orf57, UQCC2, C6orf211, CALR, CCHCR1, CDC123, CDK5RAP3, CENPK, CEP78, AGAP7P, DFFA, EIF1AX, EIF2S1, EIF4A2, EPB41L1, FTH1, GARS, HAUS8, HECTD1, HNRNPH2, HSP90AA1, KCMF1, KCTD3, KIAA0368, KPNA3, KRT18, LSM3, MCM6, MYL12A, MRPS23, MSL1, MTIF2, NAP1L1, NEXN, NSMCE4A, NVL, PELO, PSMA3, PSMA6, PSMB2, PSMD1, PTGES3, PTPRA, RASSF9, RBM25, RBX1, RPAP3, RYBP, S100A4, SAT1, SF3A3, SNRNP200, SNRPF, SQSTM1, STUB1, TARBP2, TARS, TOMM70A, TOX4, TPT1, UFD1L, UQCRB, WWP1, XPO1, XRCC5, YWHAB, ZBTB17, ZNF197, EIF3M, EIF5, EIF4G3, FLNB, FKBP4, GSTO1, MRPL40, OBSL1, PGM2, PAF1, RAD23A, RBPJ, TJP2, THOC5, ACTN2, ADRBK2, AGAP3, AMD1, ANAPC7, ANKRD7, AP2B1, ARHGAP28, ARHGEF7, ARIH1, ARRDC5, BVES, C12orf10, SPACA7, ERICH6, CAMK1, CBX1, CCDC53, CCDC64, CCDC70, CCNC, CETN3, CLCN3, CPSF3, CRNKL1, DES, DMAP1, EHD1, ENPP2, EPB41L3, ERCC5, FAM71D, C2orf73, FXR1, GAPVD1, GLMN, GNPAT, GUCA1A, HNRNPA2B1, HNRNPU, HSPA4, IARS2, INPP5K, ISG20L2, KANSL1, KLC1, KRT72, LONRF1, LUZP1, MRPL28, MYL9, MYLK, NBAS, NAPA, NCKIPSD, NEK10, NFU1, OPTN, OSBPL9, PALM3, PHYHIPL, PPP2R3C, PRPF40A, PTPN3, RAB41, RALA, RPSA, RSPH3, SBF1, SEC13, PNISR, SMARCA2, SPATA7, SPIN1, SPTBN1, SRP72, SUPT5H, SYCE1, TBC1D1, TBC1D3B, TMCO3, TRIM24, TRIM54, TSNAXIP1, TTC3, TTC39C, TXNL1, WDR66, YWHAE, ZBTB37, ZFAT, ZNRF3, ACAP2, RBM39, ADD3, ATXN10, KNSTRN, MRGBP, CCNDBP1, CCNO, DNAJC21, EIF4G2, EPB41L2, GDI2, GOLGA8A, GRIPAP1, GTSF1, HDLBP, HNRNPF, HSP90AB1, HSPA5, IGBP1, LIG1, MPHOSPH6, MYL12B, PSMC1, SMARCA4, SNW1, VIM, YWHAH, YWHAZ, ZNF131, TCPT, AHCY, AHNAK, ARHGDIA, ATIC, CARHSP1, CDK1, CSRP1, DUT, EEF1A1, EEF1B2, GLO1, GLOD4, GMPS, GRPEL1, HMGN5, HN1, HN1L, HNRNPH1, HSPA8, HSPA9, EEF1D, EIF4B, ERP29, HNRNPH3, LASP1, NAMPT, OXCT1, PAICS, PKM, PTBP1, SARS, SDHA, SEPHS1, USP14, IPO7, ITPA, MSN, OLA1, PDLIM1, PFDN2, PITPNA, PITPNB, PRDX6, PSAT1, STIP1, STMN1, TARDBP, TES, TKT, TUBA4A, UAP1, UBA2, UBE2N, UGDH, ZYX, NTRK1, STRN, TUBA1C, ARMC6, MCM2, CDC5L, EGFR, CTGLF10P, CDC73, PHF12, HYPK, DUSP16, PTPN22, CYLD, DLST, PDHA1, EDEM3, TRIM25, CCND2, BRCA1, YAP1, MAPK14TYK2GNB2L1, STAT1, PRMT5, XRCC5, VAV1, IFNAR1, CRKL, JAK1, TYK2, ELP2, IL13RA1, LYN, CBL, PTPN6, PLAUR, IL6ST, FYN, PTPN1, STAM2, GHR, IRS2, DNM2, TK1, SOCS1, KLF10, LNX1, PTAFR, EIF2AK2, HSP90AA1, JAK3, COPS5, FHL3, HNRNPK, TRAF4, KRT40, KHDRBS2, SIVA1, SHMT2, MOV10, NXF1, BAG2, CCT2, CCT3, CCT4, CCT5, CCT6A, CCT7, CCT8, DDX5, HNRNPH1, HSPB1, CEP170B, RAN, RUVBL1, RUVBL2, SLC2A1, TCP1, ALYREF, TRIM28, TUBA4A, WDR20, EFNB2, PIH1D1, TGFBR2, LRRC46, LPAR6, RNF13, ZNF333, MIER2, SIAH2, UBE2L6, LRP8, IFT43, PMEL, TNFRSF19, GMNN, IL4R, TMCO3, GPR156, CDH8, CD79A, TNFRSF13B, HAVCR2, PROSER2, LGALS3BP, C16orf71, MAS1, NLGN3


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for HSPB1_TYK2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
HgeneHSPB1P04792DB11638ArtenimolHeat shock protein beta-1small moleculeapproved|investigational
TgeneTYK2P29597DB08895TofacitinibNon-receptor tyrosine-protein kinase TYK2small moleculeapproved|investigational

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RelatedDiseases for HSPB1_TYK2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneHSPB1C2608087NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE IIB9CTD_human;UNIPROT
HgeneHSPB1C1847823CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2F6CTD_human;ORPHANET;UNIPROT
HgeneHSPB1C0007134Renal Cell Carcinoma1CTD_human
HgeneHSPB1C0007137Squamous cell carcinoma1CTD_human
HgeneHSPB1C0007194Hypertrophic Cardiomyopathy1CTD_human
HgeneHSPB1C0009375Colonic Neoplasms1CTD_human
HgeneHSPB1C0011616Contact Dermatitis1CTD_human
HgeneHSPB1C0018801Heart failure1CTD_human
HgeneHSPB1C0019693HIV Infections1CTD_human
HgeneHSPB1C0020507Hyperplasia1CTD_human
HgeneHSPB1C0023467Leukemia, Myelocytic, Acute1CTD_human
HgeneHSPB1C0026640Mouth Neoplasms1CTD_human
HgeneHSPB1C0026764Multiple Myeloma1CTD_human
HgeneHSPB1C0035126Reperfusion Injury1CTD_human
HgeneHSPB1C0038220Status Epilepticus1CTD_human
HgeneHSPB1C0038356Stomach Neoplasms1CTD_human
HgeneHSPB1C0040411Tongue Neoplasms1CTD_human
HgeneHSPB1C0152013Adenocarcinoma of lung (disorder)1CTD_human
HgeneHSPB1C2239176Liver carcinoma1CTD_human
TgeneTYK2C0003873Rheumatoid Arthritis1CTD_human
TgeneTYK2C0010346Crohn Disease1CTD_human
TgeneTYK2C0023892Biliary cirrhosis1CTD_human
TgeneTYK2C0026769Multiple Sclerosis1CTD_human
TgeneTYK2C0033860Psoriasis1CTD_human
TgeneTYK2C0041696Unipolar Depression1PSYGENET
TgeneTYK2C0236736Cocaine-Related Disorders1CTD_human
TgeneTYK2C0344315Depressed mood1PSYGENET
TgeneTYK2C1269683Major Depressive Disorder1PSYGENET
TgeneTYK2C1456784Paranoia1CTD_human