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Fusion gene ID: 15971 |
FusionGeneSummary for HDDC2_FAM47E |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: HDDC2_FAM47E | Fusion gene ID: 15971 | Hgene | Tgene | Gene symbol | HDDC2 | FAM47E | Gene ID | 51020 | 100129583 |
| Gene name | HD domain containing 2 | family with sequence similarity 47 member E | |
| Synonyms | C6orf74|CGI-130|NS5ATP2|dJ167O5.2 | - | |
| Cytomap | 6q22.31 | 4q21.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | HD domain-containing protein 2HCV NS5A-transactivated protein 2hepatitis C virus NS5A-transactivated protein 2testicular tissue protein Li 83 | protein FAM47E | |
| Modification date | 20180523 | 20180329 | |
| UniProtAcc | Q7Z4H3 | Q6ZV65 | |
| Ensembl transtripts involved in fusion gene | ENST00000608456, ENST00000368377, ENST00000608295, ENST00000398153, ENST00000608284, | ENST00000510197, ENST00000339906, ENST00000515604, ENST00000424749, ENST00000515589, | |
| Fusion gene scores | * DoF score | 4 X 4 X 3=48 | 2 X 3 X 4=24 |
| # samples | 4 | 4 | |
| ** MAII score | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/24*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: HDDC2 [Title/Abstract] AND FAM47E [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | BRCA | TCGA-AR-A5QQ-01A | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-3CDS | ENST00000608456 | ENST00000510197 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608456 | ENST00000339906 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608456 | ENST00000515604 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608456 | ENST00000424749 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-intron | ENST00000608456 | ENST00000515589 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000368377 | ENST00000510197 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000368377 | ENST00000339906 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000368377 | ENST00000515604 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000368377 | ENST00000424749 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| 5CDS-intron | ENST00000368377 | ENST00000515589 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608295 | ENST00000510197 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608295 | ENST00000339906 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608295 | ENST00000515604 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608295 | ENST00000424749 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-intron | ENST00000608295 | ENST00000515589 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000398153 | ENST00000510197 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000398153 | ENST00000339906 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000398153 | ENST00000515604 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| In-frame | ENST00000398153 | ENST00000424749 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| 5CDS-intron | ENST00000398153 | ENST00000515589 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608284 | ENST00000510197 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608284 | ENST00000339906 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608284 | ENST00000515604 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-3CDS | ENST00000608284 | ENST00000424749 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
| intron-intron | ENST00000608284 | ENST00000515589 | HDDC2 | chr6 | 125613987 | - | FAM47E | chr4 | 77184857 | + |
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FusionProtFeatures for HDDC2_FAM47E |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| HDDC2 | FAM47E |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for HDDC2_FAM47E |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000510197_chr4_77184857_+_361aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDREAMKQITQLLPEDLRKELYEL WELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENVCKAV SDFCKWVTTFGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYG AWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFILSRGYRTPRFLENMYIGKECKRACNKTPIKRTQA >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000339906_chr4_77184857_+_361aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDREAMKQITQLLPEDLRKELYEL WELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENVCKAV SDFCKWVTTFGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYG AWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFILSRGYRTPRFLENMYIGKECKRACNKTPIKRTQA >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000515604_chr4_77184857_+_304aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDREAMKQITQLLPEDLRKELYEL WELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDI DEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVD >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000424749_chr4_77184857_+_346aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDREAMKQITQLLPEDLRKELYEL WELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDI DEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVD >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000510197_chr4_77184857_+_395aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPA DNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVS NAGQWLYEEKPHKMDLLHENGPRPGLHENVCKAVSDFCKWVTTFGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLS KLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFI >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000339906_chr4_77184857_+_395aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPA DNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVS NAGQWLYEEKPHKMDLLHENGPRPGLHENVCKAVSDFCKWVTTFGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLS KLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFI >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000515604_chr4_77184857_+_338aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPA DNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVS NAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYER >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000424749_chr4_77184857_+_380aa MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPA DNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVS NAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYER KLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFILSRGYRTPRFLENMY |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000510197_chr4_77184857_+_1083nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTT TGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGA ATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAA TGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTT AGTGACTTCTGCAAGTGGGTTACTACTTTTGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACC AAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAG ACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGA GCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAG AATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGC TACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCA >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000339906_chr4_77184857_+_1083nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTT TGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGA ATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAA TGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTT AGTGACTTCTGCAAGTGGGTTACTACTTTTGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACC AAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAG ACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGA GCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAG AATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGC TACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCA >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000515604_chr4_77184857_+_912nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTT TGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGA ATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAA TGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGGAATTTCGGACATC GATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTT CCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAA CCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGAC GAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGAGCATCTTCAAGAAAGCA >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000424749_chr4_77184857_+_1038nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTT TGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGA ATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAA TGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGGAATTTCGGACATC GATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTT CCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAA CCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGAC GAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGAC CTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAA >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000510197_chr4_77184857_+_1185nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCA GATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAG CTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGAC ACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCA AACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGTA TGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATT GACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGT AAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAG ATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAG GCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATT CTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAA >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000339906_chr4_77184857_+_1185nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCA GATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAG CTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGAC ACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCA AACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGTA TGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATT GACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGT AAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAG ATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAG GCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATT CTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAA >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000515604_chr4_77184857_+_1014nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCA GATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAG CTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGAC ACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCA AACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGGA ATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAG CTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGG AAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAG CAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGAGCATC >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000424749_chr4_77184857_+_1140nt ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTC CCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATC AAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCA GATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAG CTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGAC ACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCA AACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGGA ATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAG CTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGG AAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAG CAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAG TTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTAT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000510197_chr4_77184857_+_1609nt GAAGTGGGGGAGGAGGAGGAGGAGTTGGAAGGGGAGGAGGAAGAGGGGGAGCAGGAAGAGGGGCAGAAGGAAGAAGAAGAGGGGGAGGAG AAAGAGATAGAAGAGTAAGAGGAGGGGGAAGAAAGACAAGGGGAAGGGGAGGAGGAGGAGGACGGGGAGGAGCTTCGCCGCGGCCTGCTC CGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGG CTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGG ATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGAC CTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCT TATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAG ACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTT CATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAA CAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGT GTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCA AAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAG GTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTT AAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAG ACTCCTATAAAACGAACTCAAGCATAGAAGAATCGTAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCTC CTTTTAAAGATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCTGTAAATGTAATACCTGATG GTTATAAGCATTTCTCAATGGATTTCTGCTTCAGTTAATCAACATTTTGTATACTTTATCACCCATGAGATCAATATTCACATGTAATCT >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000339906_chr4_77184857_+_1597nt GAAGTGGGGGAGGAGGAGGAGGAGTTGGAAGGGGAGGAGGAAGAGGGGGAGCAGGAAGAGGGGCAGAAGGAAGAAGAAGAGGGGGAGGAG AAAGAGATAGAAGAGTAAGAGGAGGGGGAAGAAAGACAAGGGGAAGGGGAGGAGGAGGAGGACGGGGAGGAGCTTCGCCGCGGCCTGCTC CGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGG CTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGG ATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGAC CTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCT TATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAG ACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTT CATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAA CAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGT GTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCA AAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAG GTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTT AAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAG ACTCCTATAAAACGAACTCAAGCATAGAAGAATCGTAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCTC CTTTTAAAGATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCTGTAAATGTAATACCTGATG GTTATAAGCATTTCTCAATGGATTTCTGCTTCAGTTAATCAACATTTTGTATACTTTATCACCCATGAGATCAATATTCACATGTAATCT >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000515604_chr4_77184857_+_3063nt GAAGTGGGGGAGGAGGAGGAGGAGTTGGAAGGGGAGGAGGAAGAGGGGGAGCAGGAAGAGGGGCAGAAGGAAGAAGAAGAGGGGGAGGAG AAAGAGATAGAAGAGTAAGAGGAGGGGGAAGAAAGACAAGGGGAAGGGGAGGAGGAGGAGGACGGGGAGGAGCTTCGCCGCGGCCTGCTC CGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGG CTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGG ATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGAC CTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCT TATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAG ACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTT CATGAAAATGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTC CACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTA GGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAG TTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAG GAACAGAGCATCTTCAAGAAAGCAATGGACATTTGATTTCTAAGACCAAAGACCTTGGTAAACTGCAAGCAGCATCATGGAGATTGCAGA ATCCTTCCAGGGAAGTCTGTGACAATTCAAGAGAACATGTTCCTTCTGGACAGTTTCCAGACACAGAAGCTCCAGCTACCTCTGAGACCA GTAACTCTAGGAGTTACTCTGAAGTTTCAAGAAATGAAAGCCTTGAATCTCCTATGGGAGAATGGGGATTCCAAAAAGGACAAGAGATAT CTGCTAAAGCAGCTACATGTTTTGCAGAGAAGTTGCCTTCTAGCAACCTGCTCAAGAACAGAGCTAAAGAAGAAATGAGCCTCTCTGATT TGAACAGTCAGGACCGGGTTGACCACGAGGAGTGGGAAATGGTGCCTAGGCACTCATCTTGGGGGGATGTTGGTGTGGGTGGCAGTCTTA AGGCTCCAGTGTTAAACCTAAACCAGGGAATGGACAATGGAAGAAGCACTTTGGTGGAAGCAAGAGGTCAGCAAGTGCATGGGAAAATGG AAAGGGTAGCAGTGATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAGGTTCCAGGTCCATTATGTCACAAGCACTGATGTGCAATTCATTG CAGTAACTGGAGACCATGAGTGTCTTGGGAGATGGAACACTTACATCCCACTCCACTATAACAAGGATGGGTTCTGGTCTCATTCCATTT TCCTGCCTGCAGATACAGTGGTGGAGTGGAAGTTTGTGTTGGTAGAGAATGGGGGAGTTACCCGCTGGGAAGAATGCAGCAATAGATTCC TAGAAACTGGCCATGAGGATAAAGTGGTTCACGCATGGTGGGGGATTCACTGATTCAGTTTGCAAAGTAATGGAGAAGCTGTAGAACAAT GTGGAAGAGGCTGAGGTTGTGGAACACACTGAATAAAATAAAGGCAGTGTGACTCCAAATTCAGCCATCTGAATTGTTTAAATTTGCTAG TGGATTTTGTCTAATGTGCAGAAATATATATGTCTAATGTGCAGAAATATATATGTGTGTATGTGTGTATATATATGCACACACACACAG ATAATGCTTCCAGTGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCATTATTACTTTAGGGCTTGATTCT CTTGGGGAGTGACTTGGCTAAGCTTCAGGTGTAAACTGTGGTCACGGAGCAAAAACATTAACCAGCTGCCCAGGGTTCAAGCTTGAGCCT TTAGGTGATCTTTAAACTATGGTAGTAAAATAAGCCTCACTCAAACATAGCTGACTTCCTATTGGTACAGCTTGAAAAGCACTTTTTACT ACATACACATTTTATGCTTAAAAAGTTAACATGATACGAAACTGTGATTAGAAAATATCTGGTCTGGATGTGATTAGTAAGGATACAAGA TAATGTTCTAAGACTGCCTAATGCTTTTTGTTTGATTTTCATCTGCCAGGCGTTGTTATGTGCTATGAGGGTAGCAAGTACGTCTTTGTC TTAATGATCTAAGGCTGGTGTAGAAACAAAGGGCCTAATGAGAACCAATCATCATGGAAGTCAGTTGCGGGGGCAGCCCATAAGGAAAGG GAAAGTGAGTGGGGTTGGGCATAGGCTGAGTGAGGTGGCCTGAATGACACCTCTTAGAGGACTGTGAAGTACAGGCACAGCCCGACTGCA GGGAGGGATGCACCCATCATTTACCCATGGGAGCATCTGTAGGACCATCTCTCTCCCACTTCTTCTCCCCTCCCCCACCGCATCTGGCCA GATGGACTGTCCTACAGCAATCGTTTCCATCTGTCACCCTCTTCCCTCTCCTTTCATACCAGTCACTATCTTGGGTAACAAATTTATACA GGACAGTGGTACAGAAATACATCTTTGCTCTGAGAATACAGCAAATATTAACTTAAATTATTATAACTGAACAAATAATAAAACCTGAAT >In-frame_HDDC2_ENST00000368377_chr6_125613987_-_FAM47E_ENST00000424749_chr4_77184857_+_1538nt GAAGTGGGGGAGGAGGAGGAGGAGTTGGAAGGGGAGGAGGAAGAGGGGGAGCAGGAAGAGGGGCAGAAGGAAGAAGAAGAGGGGGAGGAG AAAGAGATAGAAGAGTAAGAGGAGGGGGAAGAAAGACAAGGGGAAGGGGAGGAGGAGGAGGACGGGGAGGAGCTTCGCCGCGGCCTGCTC CGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGG CTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGG ATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGAGAAGCTATGAAGCAGATAACCCAGCTCCTACCAGAGGAC CTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCTGGAGGACACATGGGCT TATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTCTACCCAAGTCTACCTGGGACCTTCCAAGAAG ACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTTGCTCCATGAAAATGGTCCTCGTCCTGGTCTT CATGAAAATGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTC CACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTA GGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAG TTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAG GAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTT GAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCATAGAAGAATCGTAGGAGAATG ATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCTCCTTTTAAAGATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGA TGTTCAACTTTGACTTGGCAACATCTGTAAATGTAATACCTGATGGTTATAAGCATTTCTCAATGGATTTCTGCTTCAGTTAATCAACAT TTTGTATACTTTATCACCCATGAGATCAATATTCACATGTAATCTTCTCATATTTTTGTGGCACGTGAATATTATATAGGTATATCAACT >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000510197_chr4_77184857_+_1550nt GCTTCGCCGCGGCCTGCTCCGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTC CCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGT TTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGT TCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCAGATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTAT GAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGA TCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTC TACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTT GCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGAAT TTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCT AAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAA ACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCA AAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTT ACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATAT CGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCATAGAAGAATCGTAGGAGAATGATTAGGCAGATTTT ATTACTACGTACTTGGCTATTTCTCTGTCTCCTTTTAAAGATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGAC TTGGCAACATCTGTAAATGTAATACCTGATGGTTATAAGCATTTCTCAATGGATTTCTGCTTCAGTTAATCAACATTTTGTATACTTTAT CACCCATGAGATCAATATTCACATGTAATCTTCTCATATTTTTGTGGCACGTGAATATTATATAGGTATATCAACTATTGGTAAAAATAA >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000339906_chr4_77184857_+_1538nt GCTTCGCCGCGGCCTGCTCCGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTC CCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGT TTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGT TCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCAGATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTAT GAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGA TCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTC TACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTT GCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGAAT TTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCT AAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAA ACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCA AAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTT ACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCTAAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATAT CGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCATAGAAGAATCGTAGGAGAATGATTAGGCAGATTTT ATTACTACGTACTTGGCTATTTCTCTGTCTCCTTTTAAAGATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGAC TTGGCAACATCTGTAAATGTAATACCTGATGGTTATAAGCATTTCTCAATGGATTTCTGCTTCAGTTAATCAACATTTTGTATACTTTAT CACCCATGAGATCAATATTCACATGTAATCTTCTCATATTTTTGTGGCACGTGAATATTATATAGGTATATCAACTATTGGTAAAAATAA >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000515604_chr4_77184857_+_3004nt GCTTCGCCGCGGCCTGCTCCGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTC CCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGT TTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGT TCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCAGATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTAT GAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGA TCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTC TACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTT GCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGA CTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAA ACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGAT GAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGC TCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGAGCATCTTCAAGAAAGCAATGGACATTTGATTTCTAAGACCAAAGACCTTGGT AAACTGCAAGCAGCATCATGGAGATTGCAGAATCCTTCCAGGGAAGTCTGTGACAATTCAAGAGAACATGTTCCTTCTGGACAGTTTCCA GACACAGAAGCTCCAGCTACCTCTGAGACCAGTAACTCTAGGAGTTACTCTGAAGTTTCAAGAAATGAAAGCCTTGAATCTCCTATGGGA GAATGGGGATTCCAAAAAGGACAAGAGATATCTGCTAAAGCAGCTACATGTTTTGCAGAGAAGTTGCCTTCTAGCAACCTGCTCAAGAAC AGAGCTAAAGAAGAAATGAGCCTCTCTGATTTGAACAGTCAGGACCGGGTTGACCACGAGGAGTGGGAAATGGTGCCTAGGCACTCATCT TGGGGGGATGTTGGTGTGGGTGGCAGTCTTAAGGCTCCAGTGTTAAACCTAAACCAGGGAATGGACAATGGAAGAAGCACTTTGGTGGAA GCAAGAGGTCAGCAAGTGCATGGGAAAATGGAAAGGGTAGCAGTGATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAGGTTCCAGGTCCAT TATGTCACAAGCACTGATGTGCAATTCATTGCAGTAACTGGAGACCATGAGTGTCTTGGGAGATGGAACACTTACATCCCACTCCACTAT AACAAGGATGGGTTCTGGTCTCATTCCATTTTCCTGCCTGCAGATACAGTGGTGGAGTGGAAGTTTGTGTTGGTAGAGAATGGGGGAGTT ACCCGCTGGGAAGAATGCAGCAATAGATTCCTAGAAACTGGCCATGAGGATAAAGTGGTTCACGCATGGTGGGGGATTCACTGATTCAGT TTGCAAAGTAATGGAGAAGCTGTAGAACAATGTGGAAGAGGCTGAGGTTGTGGAACACACTGAATAAAATAAAGGCAGTGTGACTCCAAA TTCAGCCATCTGAATTGTTTAAATTTGCTAGTGGATTTTGTCTAATGTGCAGAAATATATATGTCTAATGTGCAGAAATATATATGTGTG TATGTGTGTATATATATGCACACACACACAGATAATGCTTCCAGTGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTG CTGATCCATTATTACTTTAGGGCTTGATTCTCTTGGGGAGTGACTTGGCTAAGCTTCAGGTGTAAACTGTGGTCACGGAGCAAAAACATT AACCAGCTGCCCAGGGTTCAAGCTTGAGCCTTTAGGTGATCTTTAAACTATGGTAGTAAAATAAGCCTCACTCAAACATAGCTGACTTCC TATTGGTACAGCTTGAAAAGCACTTTTTACTACATACACATTTTATGCTTAAAAAGTTAACATGATACGAAACTGTGATTAGAAAATATC TGGTCTGGATGTGATTAGTAAGGATACAAGATAATGTTCTAAGACTGCCTAATGCTTTTTGTTTGATTTTCATCTGCCAGGCGTTGTTAT GTGCTATGAGGGTAGCAAGTACGTCTTTGTCTTAATGATCTAAGGCTGGTGTAGAAACAAAGGGCCTAATGAGAACCAATCATCATGGAA GTCAGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGCTGAGTGAGGTGGCCTGAATGACACCTCTTAGAG GACTGTGAAGTACAGGCACAGCCCGACTGCAGGGAGGGATGCACCCATCATTTACCCATGGGAGCATCTGTAGGACCATCTCTCTCCCAC TTCTTCTCCCCTCCCCCACCGCATCTGGCCAGATGGACTGTCCTACAGCAATCGTTTCCATCTGTCACCCTCTTCCCTCTCCTTTCATAC CAGTCACTATCTTGGGTAACAAATTTATACAGGACAGTGGTACAGAAATACATCTTTGCTCTGAGAATACAGCAAATATTAACTTAAATT >In-frame_HDDC2_ENST00000398153_chr6_125613987_-_FAM47E_ENST00000424749_chr4_77184857_+_1479nt GCTTCGCCGCGGCCTGCTCCGCCCAGCCGGGGTCGGTGGCCGCATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTC CCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGT TTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGT TCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCAGATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCTAT GAAGCAGATAACCCAGCTCCTACCAGAGGACCTCAGAAAGGAGCTCTATGAACTTTGGGAACTCTTATCAAAGGTGCTGGAAGTGCTTGA TCCTGACCGGAAGCTGGAGGACACATGGGCTTATTGTCAGGACACCAGGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAAAACATTC TACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGATTT GCTCCATGAAAATGGTCCTCGTCCTGGTCTTCATGAAAATGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGA CTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAA ACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGAGGAAACTCCAGAAACCACAGAATCCTTATAAGCCAAAGTGGGTGAAGAT GAGGTATGGAGCATGGTATTTGAACCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGC TCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACTTGCAGACCTTCACGGAACAGTTGCCTTTAAGGATTTCATTCT AAGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACG AACTCAAGCATAGAAGAATCGTAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCTCCTTTTAAAGATTAA ACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCTGTAAATGTAATACCTGATGGTTATAAGCATTTC TCAATGGATTTCTGCTTCAGTTAATCAACATTTTGTATACTTTATCACCCATGAGATCAATATTCACATGTAATCTTCTCATATTTTTGT |
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FusionGenePPI for HDDC2_FAM47E |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| HDDC2 | OTUD6B, DUSP1, DUSP12, DUSP19, DUSP23, DUSP6 | FAM47E |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for HDDC2_FAM47E |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for HDDC2_FAM47E |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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