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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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Fusion gene ID: 15627

FusionGeneSummary for GTF2F2_NBEA

check button Fusion gene summary
Fusion gene informationFusion gene name: GTF2F2_NBEA
Fusion gene ID: 15627
HgeneTgene
Gene symbol

GTF2F2

NBEA

Gene ID

2963

26960

Gene namegeneral transcription factor IIF subunit 2neurobeachin
SynonymsBTF4|RAP30|TF2F2|TFIIFBCL8B|LYST2
Cytomap

13q14.12-q14.13

13q13.3

Type of geneprotein-codingprotein-coding
Descriptiongeneral transcription factor IIF subunit 2ATP-dependent helicase GTF2F2TFIIF-betageneral transcription factor IIF 30 kDa subunitgeneral transcription factor IIF, polypeptide 2, 30kDatranscription initiation factor IIF subunit betatranscription initineurobeachinlysosomal-trafficking regulator 2
Modification date2018052320180519
UniProtAcc

P13984

Q8NFP9

Ensembl transtripts involved in fusion geneENST00000340473, ENST00000494087, 
ENST00000540320, ENST00000400445, 
ENST00000310336, ENST00000379939, 
ENST00000537702, ENST00000379922, 
ENST00000461581, 
Fusion gene scores* DoF score8 X 4 X 6=1926 X 6 X 3=108
# samples 76
** MAII scorelog2(7/192*10)=-1.45567948377619
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(6/108*10)=-0.84799690655495
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: GTF2F2 [Title/Abstract] AND NBEA [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVBRCATCGA-BH-A0B7-01AGTF2F2chr13

45781640

+NBEAchr13

35923245

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000340473ENST00000540320GTF2F2chr13

45781640

+NBEAchr13

35923245

+
In-frameENST00000340473ENST00000400445GTF2F2chr13

45781640

+NBEAchr13

35923245

+
In-frameENST00000340473ENST00000310336GTF2F2chr13

45781640

+NBEAchr13

35923245

+
In-frameENST00000340473ENST00000379939GTF2F2chr13

45781640

+NBEAchr13

35923245

+
5CDS-intronENST00000340473ENST00000537702GTF2F2chr13

45781640

+NBEAchr13

35923245

+
5CDS-intronENST00000340473ENST00000379922GTF2F2chr13

45781640

+NBEAchr13

35923245

+
5CDS-intronENST00000340473ENST00000461581GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-3CDSENST00000494087ENST00000540320GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-3CDSENST00000494087ENST00000400445GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-3CDSENST00000494087ENST00000310336GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-3CDSENST00000494087ENST00000379939GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-intronENST00000494087ENST00000537702GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-intronENST00000494087ENST00000379922GTF2F2chr13

45781640

+NBEAchr13

35923245

+
3UTR-intronENST00000494087ENST00000461581GTF2F2chr13

45781640

+NBEAchr13

35923245

+

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FusionProtFeatures for GTF2F2_NBEA


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
GTF2F2

P13984

NBEA

Q8NFP9

TFIIF is a general transcription initiation factor thatbinds to RNA polymerase II and helps to recruit it to theinitiation complex in collaboration with TFIIB. It promotestranscription elongation. This subunit shows ATP-dependent DNA-helicase activity. {ECO:0000269|PubMed:2477704}. Binds to type II regulatory subunits of protein kinase Aand anchors/targets them to the membrane. May anchor the kinase tocytoskeletal and/or organelle-associated proteins (By similarity).{ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneGTF2F2chr13:45781640chr13:35923245ENST00000340473+5836_43128250Nucleotide bindingATP
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0132147_2255-159525DomainBEACH-type PH
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0132274_2563-159525DomainBEACH
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35582147_225519672947DomainBEACH-type PH
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35582274_256319672947DomainBEACH
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0182147_2255-42740DomainBEACH-type PH
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0182274_2563-42740DomainBEACH
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0131326_1368-159525RepeatWD 1
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0132718_2761-159525RepeatWD 2
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0132778_2818-159525RepeatWD 3
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0132860_2899-159525RepeatWD 4
TgeneNBEAchr13:45781640chr13:35923245ENST00000379922+0132902_2941-159525RepeatWD 5
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35582718_276119672947RepeatWD 2
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35582778_281819672947RepeatWD 3
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35582860_289919672947RepeatWD 4
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35582902_294119672947RepeatWD 5
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0181326_1368-42740RepeatWD 1
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0182718_2761-42740RepeatWD 2
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0182778_2818-42740RepeatWD 3
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0182860_2899-42740RepeatWD 4
TgeneNBEAchr13:45781640chr13:35923245ENST00000537702+0182902_2941-42740RepeatWD 5

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneNBEAchr13:45781640chr13:35923245ENST00000400445+35581326_136819672947RepeatWD 1


Top

FusionGeneSequence for GTF2F2_NBEA


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000540320_chr13_35923245_+_1108aa
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG
QTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEK
MCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVK
SKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDSAFKKIDTKVLAY
TEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRW
QRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHY
STATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPP
WAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEP
HPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHL
PIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYI
VSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLI
SVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTL

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000400445_chr13_35923245_+_1108aa
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG
QTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEK
MCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVK
SKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDSAFKKIDTKVLAY
TEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRW
QRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHY
STATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPP
WAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEP
HPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHL
PIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYI
VSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLI
SVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTL

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000310336_chr13_35923245_+_1108aa
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG
QTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEK
MCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVK
SKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDSAFKKIDTKVLAY
TEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRW
QRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHY
STATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPP
WAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEP
HPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHL
PIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYI
VSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLI
SVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTL

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000379939_chr13_35923245_+_1108aa
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG
QTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEK
MCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVK
SKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDSAFKKIDTKVLAY
TEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRW
QRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHY
STATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPP
WAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEP
HPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHL
PIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYI
VSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLI
SVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTL


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000540320_chr13_35923245_+_3324nt
ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA
TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG
GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA
CAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCC
AGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCATGCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTG
AACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAGTTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAG
ATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGATCATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAAT
AAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTGCATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGA
CGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAAGCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAG
TCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAAAATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTG
CTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTGGTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGG
ACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTAGATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATAC
ACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTA
TTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTA
GGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCATTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGG
CAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTCCTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTG
TTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTGGACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCT
TTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTATGAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTAT
TCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATTGAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCAT
CCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTAC
TACCTACCAGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCT
TGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGGATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGAC
CTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTTCGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTG
GATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAGGCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCA
CATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATG
GTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTGGCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACT
TGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTT
CCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGTGTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAAT
GCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATTCTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACA
GGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTGGTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATC
GTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTACTGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTAT
CCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAAGTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCT
AAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGATTTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATA
TCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAACGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATG
GAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGTGACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGG
CAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGATGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTG

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000400445_chr13_35923245_+_3324nt
ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA
TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG
GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA
CAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCC
AGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCATGCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTG
AACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAGTTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAG
ATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGATCATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAAT
AAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTGCATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGA
CGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAAGCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAG
TCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAAAATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTG
CTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTGGTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGG
ACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTAGATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATAC
ACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTA
TTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTA
GGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCATTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGG
CAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTCCTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTG
TTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTGGACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCT
TTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTATGAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTAT
TCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATTGAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCAT
CCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTAC
TACCTACCAGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCT
TGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGGATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGAC
CTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTTCGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTG
GATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAGGCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCA
CATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATG
GTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTGGCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACT
TGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTT
CCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGTGTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAAT
GCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATTCTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACA
GGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTGGTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATC
GTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTACTGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTAT
CCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAAGTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCT
AAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGATTTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATA
TCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAACGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATG
GAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGTGACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGG
CAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGATGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTG

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000310336_chr13_35923245_+_3324nt
ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA
TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG
GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA
CAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCC
AGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCATGCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTG
AACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAGTTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAG
ATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGATCATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAAT
AAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTGCATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGA
CGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAAGCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAG
TCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAAAATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTG
CTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTGGTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGG
ACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTAGATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATAC
ACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTA
TTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTA
GGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCATTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGG
CAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTCCTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTG
TTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTGGACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCT
TTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTATGAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTAT
TCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATTGAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCAT
CCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTAC
TACCTACCAGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCT
TGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGGATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGAC
CTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTTCGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTG
GATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAGGCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCA
CATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATG
GTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTGGCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACT
TGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTT
CCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGTGTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAAT
GCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATTCTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACA
GGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTGGTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATC
GTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTACTGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTAT
CCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAAGTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCT
AAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGATTTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATA
TCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAACGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATG
GAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGTGACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGG
CAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGATGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTG

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000379939_chr13_35923245_+_3324nt
ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA
TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG
GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA
CAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCC
AGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCATGCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTG
AACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAGTTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAG
ATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGATCATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAAT
AAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTGCATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGA
CGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAAGCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAG
TCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAAAATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTG
CTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTGGTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGG
ACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTAGATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATAC
ACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTA
TTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTA
GGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCATTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGG
CAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTCCTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTG
TTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTGGACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCT
TTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTATGAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTAT
TCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATTGAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCAT
CCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTAC
TACCTACCAGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCT
TGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGGATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGAC
CTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTTCGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTG
GATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAGGCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCA
CATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATG
GTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTGGCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACT
TGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTT
CCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGTGTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAAT
GCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATTCTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACA
GGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTGGTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATC
GTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTACTGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTAT
CCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAAGTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCT
AAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGATTTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATA
TCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAACGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATG
GAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGTGACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGG
CAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGATGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTG


* Fusion transcript sequences (Full-length transcript).
>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000540320_chr13_35923245_+_5209nt
TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC
GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA
CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG
CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT
TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAG
CTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCAT
GCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTGAACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAG
TTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAGATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGAT
CATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAATAAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTG
CATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGACGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAA
GCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAGTCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAA
AATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTGCTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTG
GTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGGACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTA
GATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATACACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATA
CGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTATTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCT
GATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTAGGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCA
TTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTC
CTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTGTTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTG
GACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCTTTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTAT
GAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTATTCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATT
GAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCATCCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGA
ACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTACTACCTACCAGAGATGTTTGTCAACAGTAATGGATATAAT
CTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCTTGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGG
ATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGACCTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTT
CGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTGGATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAG
GCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTT
CCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATGGTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTG
GCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACTTGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACA
GTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTTCCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGT
GTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAATGCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATT
CTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTG
GTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATCGTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTAC
TGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTATCCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAA
GTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGAT
TTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATATCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAA
CGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATGGAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGT
GACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGGCAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGA
TGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTTTTAAT
ATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGAAGATAAAGGAAGAACCAAAAGCCAAGTTAAAGCTGAGAGCACAAG
TGCTGCATGGAAAGGCAATATCTCTGGTGGAAAAAACTCGTCTACATCGACCTCCGTTTGTACATTCCATCACACCCAGCAATAGCTGTA
CATTGTAGTCAGCAACCATTTTACTTTGTGTGTTTTTTCACGACTGAACACCAGCTGCTATCAAGCAAGCTTATATCATGTAAATTATAT
GAATTAGGAGATGTTTTGGTAATTATTTCATATATTGTTGTTTATTGAGAAAAGGTTGTAGGATGTGTCACAAGAGACTTTTGACAATTC
TGAGGAACCTTGTGTCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCCCATTTCCAGCCTCTTTTCAAGCTGAGAAAAAAA
AAAAAAAACACGTTTGATACTTTGTACATCAGATGCATCTTATTTAAAAGGGATACTTTTGTAAAAGTAAAACCTTGTATAAAGAACAAA
ATGTTTCTTAATTTTATTGTGGAGTTACAACTTGCATGTTCCTTACTCCTGTTGGCTTGATGGAACAGGTGCATTCACACTATGAAACAG
AAAGATCTGTCCAAGGACACAGCTTGTATGAAAGGGTTGAATTTGGGCTCCATCAGTAATTTTTGACATTTTCACCAAAATATAGTTTGC
ACTTTTTAATCTAAAGTCATCCCTTCTGAGTGAAATTTGCTCATAAAGCATTTGGATACTAAGCCATTATTTGCCATTTTGGGTACTTTA
TACAAAGAAAATTCAGCCCTACCCTGCATAATTTGAAGACACAGCAGAAAGGGGGCTTAGGGATGAGGTCCTGGTTTTTCTTGTATAAAT
AGGAGTCATGGGCGTTAGTTCTGTAGTAATAACTTCCCAGCACCTGGACATCTCTTCCAGAGTTATCCCACTGGCTTGGTGTGTATACAT
TAGGGGAGGATAATCTGATGCTAACTTTTTTTTTCTCTTTGGTTCTTGAATAGCTTAGTTTCTTTAATAACAAGTCAAACTTTATTACAA
CAATAACTGAAGTTATTCTTTTAGGTTCTCGTGAAATTCTCACTGAAAGCCACATTCTTAGCCTAAGGCATTTCATCTTTTATGATATAA
AATGATGGCTATCAAATGATTTTCCATACATTGTACTGATCAAGTTATACACCCAGGGGTATATACACTTTCTTCATGTTTCTTCTTTGT
ATATTTGGTGACTGTATCGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGGAATGTAATTTTCTCAGAATTTAC
ACTCACTCGCAGTCATTTATTTAAAAAGATAAAACAAGATAATGGGTTCTTTGTATTGGCACTTTGCACCAGAAACATATCATTATTTAT
TGATGTGATTACTTATTTGTTATCCACCTTGTACTAGTAAGTTTTAGCACTGAATTCCTTCTTCACTGTTGTTTGTATTTATGAAATTCT
GAAATTATGGGGAATCAGCGTAATGATTAAGTTATTCATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATA
CTTAACATCTGGAAGACAAGTTCATTTCATCTTGAGATCATGGTGAAATATTTTGGATATATAAATTCCTTAAGCTATTGTAACCATGTT

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000400445_chr13_35923245_+_5209nt
TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC
GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA
CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG
CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT
TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAG
CTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCAT
GCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTGAACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAG
TTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAGATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGAT
CATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAATAAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTG
CATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGACGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAA
GCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAGTCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAA
AATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTGCTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTG
GTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGGACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTA
GATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATACACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATA
CGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTATTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCT
GATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTAGGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCA
TTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTC
CTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTGTTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTG
GACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCTTTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTAT
GAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTATTCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATT
GAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCATCCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGA
ACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTACTACCTACCAGAGATGTTTGTCAACAGTAATGGATATAAT
CTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCTTGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGG
ATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGACCTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTT
CGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTGGATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAG
GCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTT
CCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATGGTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTG
GCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACTTGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACA
GTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTTCCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGT
GTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAATGCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATT
CTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTG
GTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATCGTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTAC
TGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTATCCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAA
GTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGAT
TTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATATCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAA
CGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATGGAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGT
GACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGGCAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGA
TGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTTTTAAT
ATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGAAGATAAAGGAAGAACCAAAAGCCAAGTTAAAGCTGAGAGCACAAG
TGCTGCATGGAAAGGCAATATCTCTGGTGGAAAAAACTCGTCTACATCGACCTCCGTTTGTACATTCCATCACACCCAGCAATAGCTGTA
CATTGTAGTCAGCAACCATTTTACTTTGTGTGTTTTTTCACGACTGAACACCAGCTGCTATCAAGCAAGCTTATATCATGTAAATTATAT
GAATTAGGAGATGTTTTGGTAATTATTTCATATATTGTTGTTTATTGAGAAAAGGTTGTAGGATGTGTCACAAGAGACTTTTGACAATTC
TGAGGAACCTTGTGTCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCCCATTTCCAGCCTCTTTTCAAGCTGAGAAAAAAA
AAAAAAAACACGTTTGATACTTTGTACATCAGATGCATCTTATTTAAAAGGGATACTTTTGTAAAAGTAAAACCTTGTATAAAGAACAAA
ATGTTTCTTAATTTTATTGTGGAGTTACAACTTGCATGTTCCTTACTCCTGTTGGCTTGATGGAACAGGTGCATTCACACTATGAAACAG
AAAGATCTGTCCAAGGACACAGCTTGTATGAAAGGGTTGAATTTGGGCTCCATCAGTAATTTTTGACATTTTCACCAAAATATAGTTTGC
ACTTTTTAATCTAAAGTCATCCCTTCTGAGTGAAATTTGCTCATAAAGCATTTGGATACTAAGCCATTATTTGCCATTTTGGGTACTTTA
TACAAAGAAAATTCAGCCCTACCCTGCATAATTTGAAGACACAGCAGAAAGGGGGCTTAGGGATGAGGTCCTGGTTTTTCTTGTATAAAT
AGGAGTCATGGGCGTTAGTTCTGTAGTAATAACTTCCCAGCACCTGGACATCTCTTCCAGAGTTATCCCACTGGCTTGGTGTGTATACAT
TAGGGGAGGATAATCTGATGCTAACTTTTTTTTTCTCTTTGGTTCTTGAATAGCTTAGTTTCTTTAATAACAAGTCAAACTTTATTACAA
CAATAACTGAAGTTATTCTTTTAGGTTCTCGTGAAATTCTCACTGAAAGCCACATTCTTAGCCTAAGGCATTTCATCTTTTATGATATAA
AATGATGGCTATCAAATGATTTTCCATACATTGTACTGATCAAGTTATACACCCAGGGGTATATACACTTTCTTCATGTTTCTTCTTTGT
ATATTTGGTGACTGTATCGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGGAATGTAATTTTCTCAGAATTTAC
ACTCACTCGCAGTCATTTATTTAAAAAGATAAAACAAGATAATGGGTTCTTTGTATTGGCACTTTGCACCAGAAACATATCATTATTTAT
TGATGTGATTACTTATTTGTTATCCACCTTGTACTAGTAAGTTTTAGCACTGAATTCCTTCTTCACTGTTGTTTGTATTTATGAAATTCT
GAAATTATGGGGAATCAGCGTAATGATTAAGTTATTCATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATA
CTTAACATCTGGAAGACAAGTTCATTTCATCTTGAGATCATGGTGAAATATTTTGGATATATAAATTCCTTAAGCTATTGTAACCATGTT

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000310336_chr13_35923245_+_5209nt
TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC
GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA
CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG
CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT
TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAG
CTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCAT
GCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTGAACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAG
TTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAGATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGAT
CATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAATAAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTG
CATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGACGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAA
GCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAGTCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAA
AATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTGCTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTG
GTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGGACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTA
GATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATACACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATA
CGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTATTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCT
GATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTAGGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCA
TTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTC
CTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTGTTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTG
GACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCTTTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTAT
GAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTATTCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATT
GAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCATCCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGA
ACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTACTACCTACCAGAGATGTTTGTCAACAGTAATGGATATAAT
CTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCTTGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGG
ATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGACCTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTT
CGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTGGATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAG
GCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTT
CCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATGGTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTG
GCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACTTGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACA
GTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTTCCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGT
GTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAATGCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATT
CTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTG
GTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATCGTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTAC
TGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTATCCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAA
GTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGAT
TTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATATCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAA
CGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATGGAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGT
GACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGGCAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGA
TGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTTTTAAT
ATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGAAGATAAAGGAAGAACCAAAAGCCAAGTTAAAGCTGAGAGCACAAG
TGCTGCATGGAAAGGCAATATCTCTGGTGGAAAAAACTCGTCTACATCGACCTCCGTTTGTACATTCCATCACACCCAGCAATAGCTGTA
CATTGTAGTCAGCAACCATTTTACTTTGTGTGTTTTTTCACGACTGAACACCAGCTGCTATCAAGCAAGCTTATATCATGTAAATTATAT
GAATTAGGAGATGTTTTGGTAATTATTTCATATATTGTTGTTTATTGAGAAAAGGTTGTAGGATGTGTCACAAGAGACTTTTGACAATTC
TGAGGAACCTTGTGTCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCCCATTTCCAGCCTCTTTTCAAGCTGAGAAAAAAA
AAAAAAAACACGTTTGATACTTTGTACATCAGATGCATCTTATTTAAAAGGGATACTTTTGTAAAAGTAAAACCTTGTATAAAGAACAAA
ATGTTTCTTAATTTTATTGTGGAGTTACAACTTGCATGTTCCTTACTCCTGTTGGCTTGATGGAACAGGTGCATTCACACTATGAAACAG
AAAGATCTGTCCAAGGACACAGCTTGTATGAAAGGGTTGAATTTGGGCTCCATCAGTAATTTTTGACATTTTCACCAAAATATAGTTTGC
ACTTTTTAATCTAAAGTCATCCCTTCTGAGTGAAATTTGCTCATAAAGCATTTGGATACTAAGCCATTATTTGCCATTTTGGGTACTTTA
TACAAAGAAAATTCAGCCCTACCCTGCATAATTTGAAGACACAGCAGAAAGGGGGCTTAGGGATGAGGTCCTGGTTTTTCTTGTATAAAT
AGGAGTCATGGGCGTTAGTTCTGTAGTAATAACTTCCCAGCACCTGGACATCTCTTCCAGAGTTATCCCACTGGCTTGGTGTGTATACAT
TAGGGGAGGATAATCTGATGCTAACTTTTTTTTTCTCTTTGGTTCTTGAATAGCTTAGTTTCTTTAATAACAAGTCAAACTTTATTACAA
CAATAACTGAAGTTATTCTTTTAGGTTCTCGTGAAATTCTCACTGAAAGCCACATTCTTAGCCTAAGGCATTTCATCTTTTATGATATAA
AATGATGGCTATCAAATGATTTTCCATACATTGTACTGATCAAGTTATACACCCAGGGGTATATACACTTTCTTCATGTTTCTTCTTTGT
ATATTTGGTGACTGTATCGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGGAATGTAATTTTCTCAGAATTTAC
ACTCACTCGCAGTCATTTATTTAAAAAGATAAAACAAGATAATGGGTTCTTTGTATTGGCACTTTGCACCAGAAACATATCATTATTTAT
TGATGTGATTACTTATTTGTTATCCACCTTGTACTAGTAAGTTTTAGCACTGAATTCCTTCTTCACTGTTGTTTGTATTTATGAAATTCT
GAAATTATGGGGAATCAGCGTAATGATTAAGTTATTCATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATA
CTTAACATCTGGAAGACAAGTTCATTTCATCTTGAGATCATGGTGAAATATTTTGGATATATAAATTCCTTAAGCTATTGTAACCATGTT

>In-frame_GTF2F2_ENST00000340473_chr13_45781640_+_NBEA_ENST00000379939_chr13_35923245_+_5210nt
TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC
GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA
CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG
CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT
TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAG
CTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTACTGTGCCAT
GCTATGAAGGACCATATAGTCCGTGTTGCAAATGAAGCTGAGTTTATTTTGAACAGACAAAGAGCCGAGGATGTACATAAACATGCAGAG
TTTGAGTCACAGTGTGCCCAATATGCTGCTGATAGAAGAGAGGAAGAAAAGATGTGTGACCATCTTATCAGTGCTGCTAAACATCGAGAT
CATGTAACAGCAAATCAGCTGAAACAGAAGATTCTCAATATTCTCACAAATAAACATGGTGCTTGGGGAGCAGTTTCTCATAGCCAATTG
CATGATTTCTGGCGTTTGGATTACTGGGAAGATGATCTTCGTCGAAGGAGACGATTTGTTCGCAATGCATTTGGCTCCACTCATGCTGAA
GCATTGCTGAAAGCTGCAATAGAATATGGCACGGAAGAAGATGTAGTAAAGTCAAAGAAAACATTCAGAAGTCAAGCAATAGTGAACCAA
AATGCAGAGACAGAACTTATGCTGGAAGGAGACGATGATGCAGTCAGTCTGCTACAGGAGAAAGAAATTGACAACCTTGCAGGCCCAGTG
GTTCTCAGCACCCCTGCCCAGCTCATCGCTCCCGTGGTGGTGGCCAAGGGGACTCTCTCCATCACCACGACAGAAATCTACTTCGAGGTA
GATGAGGATGATTCTGCCTTCAAGAAGATCGACACGAAAGTTCTTGCATACACTGAGGGACTTCACGGAAAATGGATGTTCAGCGAGATA
CGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTATTTATGGCAAACCGAACCTCAGTTATGTTTAATTTCCCT
GATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTTGCCTCGGGTTGGAGTAGGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCA
TTGGCCACTCCTCGACAGCTTTATAAATCTTCCAATATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTCGAATATTTGATGTTC
CTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTGTTTCCGTGGGTGTTAACCAACTATGAATCAGAAGAGTTG
GACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATTGGTGCTTTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTAT
GAGACATGGGAAGATGATCAAAGCCCACCCTACCATTATAATACCCATTATTCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATT
GAACCTTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCATCCAGATCGAACCTTCTCATCCGTTGCAAGGTCTTGGAGA
ACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTACTACCTACCAGAGATGTTTGTCAACAGTAATGGATATAAT
CTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCTTGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGG
ATGGCCCTAGAAAGTGAATTTGTTTCTTGCCAACTTCATCAGTGGATCGACCTTATATTTGGCTATAAGCAGCGAGGACCAGAAGCAGTT
CGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTGGATAGTATCACTGATCCTGTGCTCAGGGAGGCCATGGAG
GCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTT
CCACAGAGTCCGCTCATGTTTAAAGATCAGATGCAACAGGATGTGATAATGGTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTG
GCAGCCAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACTTGCAGCCGACTCTTTGCAGTGAATAGATGGCACAACACA
GTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTTCCCATTGAAATGGATCCATTAATAGCCAATAATTCAGGT
GTAAACAAACGGCAGATCACAGACCTCGTTGACCAGAGTATACAAATCAATGCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATT
CTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAATTGACTCAGATTGTATTTGGCCATTGGGATGTG
GTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATCGTGTCCGGATCTCGAGATGCCACCCTGCTGCTCTGGTAC
TGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGTGACTATCCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAA
GTTGTCTGTGTTTCTGTCTGTGCAGAACTTGGGCTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGAT
TTGCTGAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATATCTGTCTCCAGCGAAGGCCACTGTATCATATACTATGAA
CGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATGGAGATCAATGATTCAACACGGGCCATTCTCCTGAGCAGT
GACGGCCAGAACCTGGTCACCGGAGGGGACAATGGGGTAGTAGAGGTCTGGCAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGA
TGTGATGCTGGCATTAGAGCAATGGACTTGTCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTTTTAAT
ATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGAAGATAAAGGAAGAACCAAAAGCCAAGTTAAAGCTGAGAGCACAAG
TGCTGCATGGAAAGGCAATATCTCTGGTGGAAAAAACTCGTCTACATCGACCTCCGTTTGTACATTCCATCACACCCAGCAATAGCTGTA
CATTGTAGTCAGCAACCATTTTACTTTGTGTGTTTTTTCACGACTGAACACCAGCTGCTATCAAGCAAGCTTATATCATGTAAATTATAT
GAATTAGGAGATGTTTTGGTAATTATTTCATATATTGTTGTTTATTGAGAAAAGGTTGTAGGATGTGTCACAAGAGACTTTTGACAATTC
TGAGGAACCTTGTGTCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCCCATTTCCAGCCTCTTTTCAAGCTGAGAAAAAAA
AAAAAAAACACGTTTGATACTTTGTACATCAGATGCATCTTATTTAAAAGGGATACTTTTGTAAAAGTAAAACCTTGTATAAAGAACAAA
ATGTTTCTTAATTTTATTGTGGAGTTACAACTTGCATGTTCCTTACTCCTGTTGGCTTGATGGAACAGGTGCATTCACACTATGAAACAG
AAAGATCTGTCCAAGGACACAGCTTGTATGAAAGGGTTGAATTTGGGCTCCATCAGTAATTTTTGACATTTTCACCAAAATATAGTTTGC
ACTTTTTAATCTAAAGTCATCCCTTCTGAGTGAAATTTGCTCATAAAGCATTTGGATACTAAGCCATTATTTGCCATTTTGGGTACTTTA
TACAAAGAAAATTCAGCCCTACCCTGCATAATTTGAAGACACAGCAGAAAGGGGGCTTAGGGATGAGGTCCTGGTTTTTCTTGTATAAAT
AGGAGTCATGGGCGTTAGTTCTGTAGTAATAACTTCCCAGCACCTGGACATCTCTTCCAGAGTTATCCCACTGGCTTGGTGTGTATACAT
TAGGGGAGGATAATCTGATGCTAACTTTTTTTTTCTCTTTGGTTCTTGAATAGCTTAGTTTCTTTAATAACAAGTCAAACTTTATTACAA
CAATAACTGAAGTTATTCTTTTAGGTTCTCGTGAAATTCTCACTGAAAGCCACATTCTTAGCCTAAGGCATTTCATCTTTTATGATATAA
AATGATGGCTATCAAATGATTTTCCATACATTGTACTGATCAAGTTATACACCCAGGGGTATATACACTTTCTTCATGTTTCTTCTTTGT
ATATTTGGTGACTGTATCGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGGAATGTAATTTTCTCAGAATTTAC
ACTCACTCGCAGTCATTTATTTAAAAAGATAAAACAAGATAATGGGTTCTTTGTATTGGCACTTTGCACCAGAAACATATCATTATTTAT
TGATGTGATTACTTATTTGTTATCCACCTTGTACTAGTAAGTTTTAGCACTGAATTCCTTCTTCACTGTTGTTTGTATTTATGAAATTCT
GAAATTATGGGGAATCAGCGTAATGATTAAGTTATTCATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATA
CTTAACATCTGGAAGACAAGTTCATTTCATCTTGAGATCATGGTGAAATATTTTGGATATATAAATTCCTTAAGCTATTGTAACCATGTT


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FusionGenePPI for GTF2F2_NBEA


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
GTF2F2GTF2B, HTATSF1, GTF2E1, TBP, AHR, ARNT, FOS, JUN, POLR2E, MSX2, ATF4, TCEA1, GTF2E2, AR, POLR2A, POLR2B, POLR2J, POLR2G, POLR2H, CTDP1, BAG6, MED29, SUPT5H, GPRC5A, POLR2C, GTF2F1, TAF10, TAF5, TAF4, HMGA1, LMNA, RPL27A, TCTEX1D2, HECW2, EFTUD2, SH3GL1, SHMT1, FAM177A1, UBR5, SRRT, SUPT4H1, NTRK1, KLF5, EWSR1, XPO1, POLR2F, CBLN4, TMEM184ANBEASTRN4, DTNBP1, NOTCH1, VCP, FOSL2, RD3, TMEM17, PTPRH, ALOXE3, SHC4, RBM48, MRPL21, NAB2, STRADB


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for GTF2F2_NBEA


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GTF2F2_NBEA


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneNBEAC0004352Autistic Disorder2CTD_human
TgeneNBEAC0023893Liver Cirrhosis, Experimental1CTD_human