![]() |
||||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Fusion gene ID: 15515 |
FusionGeneSummary for GSE1_GPR161 |
![]() |
Fusion gene information | Fusion gene name: GSE1_GPR161 | Fusion gene ID: 15515 | Hgene | Tgene | Gene symbol | GSE1 | GPR161 | Gene ID | 23199 | 23432 |
Gene name | Gse1 coiled-coil protein | G protein-coupled receptor 161 | |
Synonyms | CRHSP24|KIAA0182 | RE2 | |
Cytomap | 16q24.1 | 1q24.2 | |
Type of gene | protein-coding | protein-coding | |
Description | genetic suppressor element 1CTC-786C10.1Gse1 coiled-coil protein homolog | G-protein coupled receptor 161G-protein coupled receptor RE2 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q14687 | Q8N6U8 | |
Ensembl transtripts involved in fusion gene | ENST00000405402, ENST00000253458, ENST00000393243, ENST00000471070, | ENST00000367838, ENST00000271357, ENST00000367836, ENST00000539777, ENST00000537209, ENST00000361697, ENST00000546300, ENST00000367835, ENST00000485232, | |
Fusion gene scores | * DoF score | 13 X 9 X 7=819 | 4 X 3 X 4=48 |
# samples | 13 | 4 | |
** MAII score | log2(13/819*10)=-2.65535182861255 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: GSE1 [Title/Abstract] AND GPR161 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BG014025 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000405402 | ENST00000367838 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000271357 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000367836 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000539777 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000537209 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000361697 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000546300 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000367835 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000405402 | ENST00000485232 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000367838 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000271357 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000367836 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000539777 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000537209 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000361697 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000546300 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000367835 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000253458 | ENST00000485232 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000367838 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000271357 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000367836 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000539777 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000537209 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000361697 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000546300 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000367835 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000393243 | ENST00000485232 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000367838 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000271357 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000367836 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000539777 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000537209 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000361697 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000546300 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000367835 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
intron-intron | ENST00000471070 | ENST00000485232 | GSE1 | chr16 | 85667360 | - | GPR161 | chr1 | 168061667 | - |
Top |
FusionProtFeatures for GSE1_GPR161 |
![]() |
Hgene | Tgene |
GSE1 | GPR161 |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for GSE1_GPR161 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
Top |
FusionGenePPI for GSE1_GPR161 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for GSE1_GPR161 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for GSE1_GPR161 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |