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Fusion gene ID: 14075 |
FusionGeneSummary for FUS_ADNP2 |
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Fusion gene information | Fusion gene name: FUS_ADNP2 | Fusion gene ID: 14075 | Hgene | Tgene | Gene symbol | FUS | ADNP2 | Gene ID | 2521 | 22850 |
Gene name | FUS RNA binding protein | ADNP homeobox 2 | |
Synonyms | ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS | ZNF508 | |
Cytomap | 16p11.2 | 18q23 | |
Type of gene | protein-coding | protein-coding | |
Description | RNA-binding protein FUS75 kDa DNA-pairing proteinFUS/ERG chimeric proteinFUS/ERG fusion proteinfus-like proteinfused in sarcomafusion gene in myxoid liposarcomaheterogeneous nuclear ribonucleoprotein P2oncogene FUSoncogene TLStranslocated in lip | activity-dependent neuroprotector homeobox protein 2ADNP homeobox protein 2zinc finger protein 508 | |
Modification date | 20180527 | 20180519 | |
UniProtAcc | P35637 | Q6IQ32 | |
Ensembl transtripts involved in fusion gene | ENST00000254108, ENST00000380244, ENST00000568685, ENST00000474990, | ENST00000262198, | |
Fusion gene scores | * DoF score | 21 X 23 X 7=3381 | 1 X 1 X 1=1 |
# samples | 27 | 1 | |
** MAII score | log2(27/3381*10)=-3.64641870384255 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: FUS [Title/Abstract] AND ADNP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | CN361911 | FUS | chr16 | 31193986 | + | ADNP2 | chr18 | 77894318 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000254108 | ENST00000262198 | FUS | chr16 | 31193986 | + | ADNP2 | chr18 | 77894318 | + |
Frame-shift | ENST00000380244 | ENST00000262198 | FUS | chr16 | 31193986 | + | ADNP2 | chr18 | 77894318 | + |
Frame-shift | ENST00000568685 | ENST00000262198 | FUS | chr16 | 31193986 | + | ADNP2 | chr18 | 77894318 | + |
intron-3CDS | ENST00000474990 | ENST00000262198 | FUS | chr16 | 31193986 | + | ADNP2 | chr18 | 77894318 | + |
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FusionProtFeatures for FUS_ADNP2 |
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Hgene | Tgene |
FUS | ADNP2 |
Binds both single-stranded and double-stranded DNA andpromotes ATP-independent annealing of complementary single-stranded DNAs and D-loop formation in superhelical double-strandedDNA. May play a role in maintenance of genomic integrity. | May be involved in transcriptional regulation. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for FUS_ADNP2 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for FUS_ADNP2 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FUS_ADNP2 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FUS_ADNP2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | FUS | C1842675 | AMYOTROPHIC LATERAL SCLEROSIS 6 (disorder) | 6 | UNIPROT |
Hgene | FUS | C0206634 | Liposarcoma, Myxoid | 2 | CTD_human;ORPHANET |
Hgene | FUS | C3539195 | TREMOR, HEREDITARY ESSENTIAL, 4 | 1 | UNIPROT |
Tgene | ADNP2 | C0036341 | Schizophrenia | 1 | PSYGENET |