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Fusion gene ID: 13573 |
FusionGeneSummary for FLNB_GON4L |
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Fusion gene information | Fusion gene name: FLNB_GON4L | Fusion gene ID: 13573 | Hgene | Tgene | Gene symbol | FLNB | GON4L | Gene ID | 2317 | 54856 |
Gene name | filamin B | gon-4 like | |
Synonyms | ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP | GON-4|GON4|YARP | |
Cytomap | 3p14.3 | 1q22 | |
Type of gene | protein-coding | protein-coding | |
Description | filamin-BABP-280 homologLarsen syndrome 1 (autosomal dominant)actin binding protein 278actin-binding-like proteinbeta-filaminfilamin B, betafilamin homolog 1filamin-3thyroid autoantigen | GON-4-like protein2610100B20RikYY1AP related proteinYY1AP-related protein1gon-4 homolog | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | O75369 | Q3T8J9 | |
Ensembl transtripts involved in fusion gene | ENST00000490882, ENST00000429972, ENST00000295956, ENST00000358537, ENST00000357272, ENST00000348383, ENST00000493452, ENST00000419752, ENST00000484981, | ENST00000437809, ENST00000368331, ENST00000271883, ENST00000361040, ENST00000471341, | |
Fusion gene scores | * DoF score | 8 X 11 X 8=704 | 7 X 6 X 6=252 |
# samples | 17 | 8 | |
** MAII score | log2(17/704*10)=-2.0500406824996 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/252*10)=-1.65535182861255 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FLNB [Title/Abstract] AND GON4L [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | STAD | TCGA-BR-8485-01A | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000490882 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000490882 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000490882 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000490882 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
5CDS-5UTR | ENST00000490882 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000429972 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000429972 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000429972 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000429972 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
5CDS-5UTR | ENST00000429972 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000295956 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000295956 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000295956 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000295956 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
5CDS-5UTR | ENST00000295956 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000358537 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000358537 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000358537 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000358537 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
5CDS-5UTR | ENST00000358537 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000357272 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000357272 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000357272 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000357272 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
5CDS-5UTR | ENST00000357272 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000348383 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000348383 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000348383 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
Frame-shift | ENST00000348383 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
5CDS-5UTR | ENST00000348383 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000493452 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000493452 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000493452 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000493452 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-5UTR | ENST00000493452 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000419752 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000419752 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000419752 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000419752 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-5UTR | ENST00000419752 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000484981 | ENST00000437809 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000484981 | ENST00000368331 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000484981 | ENST00000271883 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-3CDS | ENST00000484981 | ENST00000361040 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
intron-5UTR | ENST00000484981 | ENST00000471341 | FLNB | chr3 | 57994583 | + | GON4L | chr1 | 155737332 | - |
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FusionProtFeatures for FLNB_GON4L |
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Hgene | Tgene |
FLNB | GON4L |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for FLNB_GON4L |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for FLNB_GON4L |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FLNB | NPHP1, PSEN1, PSEN2, FLNA, ITGB1, ITGB3, ITGB6, FBLIM1, TSHR, GP1BA, OTUD1, G3BP1, PLEKHO1, RAD21, SIRT7, ISG15, ASB2, RAC1, MAP3K1, MAPK8, CDK2, HNRNPA0, VCP, ZC3H4, NUP210, HNRNPM, CSTB, SEPT9, ESR1, MDC1, FMNL1, VCAM1, FN1, SMURF2, MLH1, ITGA4, NPM1, DCTN2, DCTN3, TXNL1, UBR4, FLNC, LEO1, MAD1L1, PSMD12, PSMD3, SQSTM1, TRIM55, CUL7, OBSL1, CCDC8, SUZ12, RNF2, SIRT6, ABCE1, HSPB1, AP1G1, BASP1, EIF4EBP1, AHNAK, AP1B1, ARFIP1, DCPS, MAP4, NUP50, SEPT6, TARDBP, GGA1, NMD3, RSU1, SEC13, TLDC1, UFD1L, VBP1, MAP2K4, PTEN, MED4, CAPZA2, DBN1, MYH9, PPP1CB, RALA, IQGAP1, SYNPO, ITGB3BP, LIMA1, ANLN, MYO19, MYO18A, MCM2, MCM5, CDC73, TSC22D2, CDH1, HSPB7, ARRB2, TRIM25, BRCA1, TES | GON4L | DHX16, PNKD, HIST1H2BA, KRAS, HIST1H2BG, CRAMP1L, H2AFX, ASB3, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FLNB_GON4L |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FLNB_GON4L |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | FLNB | C0175778 | Larsen syndrome | 2 | UNIPROT |
Hgene | FLNB | C0036341 | Schizophrenia | 1 | PSYGENET |
Hgene | FLNB | C0265283 | Atelosteogenesis, type 1 | 1 | CTD_human;ORPHANET;UNIPROT |
Hgene | FLNB | C0432201 | Boomerang dysplasia | 1 | CTD_human;ORPHANET;UNIPROT |
Hgene | FLNB | C1848934 | SPONDYLOCARPOTARSAL SYNOSTOSIS SYNDROME | 1 | CTD_human;ORPHANET |
Hgene | FLNB | C2931648 | Larsen syndrome, dominant type | 1 | CTD_human;ORPHANET |
Hgene | FLNB | C3668942 | Atelosteogenesis Type 3 | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | GON4L | C3714756 | Intellectual Disability | 1 | CTD_human |