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Fusion gene ID: 13545 |
FusionGeneSummary for FKTN_ULK4 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: FKTN_ULK4 | Fusion gene ID: 13545 | Hgene | Tgene | Gene symbol | FKTN | ULK4 | Gene ID | 2218 | 54986 |
| Gene name | fukutin | unc-51 like kinase 4 | |
| Synonyms | CMD1X|FCMD|LGMD2M|MDDGA4|MDDGB4|MDDGC4 | FAM7C1|REC01035 | |
| Cytomap | 9q31.2 | 3p22.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | fukutinFukuyama type congenital muscular dystrophy proteinpatient fukutin | serine/threonine-protein kinase ULK4 | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | O75072 | Q96C45 | |
| Ensembl transtripts involved in fusion gene | ENST00000602661, ENST00000223528, ENST00000540160, ENST00000448551, ENST00000357998, ENST00000490134, | ENST00000301831, ENST00000420927, ENST00000489118, ENST00000414606, | |
| Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 9 X 9 X 4=324 |
| # samples | 3 | 10 | |
| ** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(10/324*10)=-1.6959938131099 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: FKTN [Title/Abstract] AND ULK4 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Kinase involved fusion gene, inframe and retained kinase domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | STAD | TCGA-FP-A8CX-01A | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000602661 | ENST00000301831 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000602661 | ENST00000420927 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000602661 | ENST00000489118 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000602661 | ENST00000414606 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| In-frame | ENST00000223528 | ENST00000301831 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000223528 | ENST00000420927 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000223528 | ENST00000489118 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000223528 | ENST00000414606 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| In-frame | ENST00000540160 | ENST00000301831 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000540160 | ENST00000420927 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000540160 | ENST00000489118 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000540160 | ENST00000414606 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| In-frame | ENST00000448551 | ENST00000301831 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000448551 | ENST00000420927 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000448551 | ENST00000489118 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000448551 | ENST00000414606 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| In-frame | ENST00000357998 | ENST00000301831 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000357998 | ENST00000420927 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000357998 | ENST00000489118 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 5CDS-intron | ENST00000357998 | ENST00000414606 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 3UTR-3CDS | ENST00000490134 | ENST00000301831 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 3UTR-intron | ENST00000490134 | ENST00000420927 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 3UTR-intron | ENST00000490134 | ENST00000489118 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
| 3UTR-intron | ENST00000490134 | ENST00000414606 | FKTN | chr9 | 108358938 | + | ULK4 | chr3 | 41795980 | - |
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FusionProtFeatures for FKTN_ULK4 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| FKTN | ULK4 |
| Glycosyltransferase involved in the biosynthesis of thephosphorylated O-mannosyl trisaccharide (N-acetylgalactosamine-beta-3-N-acetylglucosamine-beta-4-(phosphate-6-)mannose), acarbohydrate structure present in alpha-dystroglycan (DAG1).Required for normal location of POMGNT1 in Golgi membranes, andfor normal POMGNT1 activity (PubMed:17034757). May interact withand reinforce a large complex encompassing the outside and insideof muscle membranes. Could be involved in brain development.{ECO:0000269|PubMed:17034757, ECO:0000269|PubMed:25279699}. | May be involved in the remodeling of cytoskeletalcomponents, such as alpha-tubulin, and in this way regulatesneurite branching and elongation, as well as cell motility.{ECO:0000269|PubMed:24284070}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000223528 | + | 3 | 10 | 1_7 | 55 | 462 | Topological domain | Cytoplasmic |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000357998 | + | 2 | 10 | 1_7 | 55 | 431 | Topological domain | Cytoplasmic |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000448551 | + | 4 | 12 | 1_7 | 55 | 431 | Topological domain | Cytoplasmic |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000602661 | + | 4 | 11 | 1_7 | 55 | 462 | Topological domain | Cytoplasmic |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000223528 | + | 3 | 10 | 8_28 | 55 | 462 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000357998 | + | 2 | 10 | 8_28 | 55 | 431 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000448551 | + | 4 | 12 | 8_28 | 55 | 431 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Hgene | FKTN | chr9:108358938 | chr3:41795980 | ENST00000602661 | + | 4 | 11 | 8_28 | 55 | 462 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 1147_1150 | 731 | 1276 | Compositional bias | Note=Poly-Leu |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 1147_1150 | -39 | 581 | Compositional bias | Note=Poly-Leu |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 4_280 | -39 | 581 | Domain | Protein kinase |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 1025_1063 | 731 | 1276 | Repeat | Note=HEAT 3 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 1151_1189 | 731 | 1276 | Repeat | Note=HEAT 4 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 1213_1253 | 731 | 1276 | Repeat | Note=HEAT 5 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 842_880 | 731 | 1276 | Repeat | Note=HEAT 1 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 926_964 | 731 | 1276 | Repeat | Note=HEAT 2 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 1025_1063 | -39 | 581 | Repeat | Note=HEAT 3 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 1151_1189 | -39 | 581 | Repeat | Note=HEAT 4 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 1213_1253 | -39 | 581 | Repeat | Note=HEAT 5 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 842_880 | -39 | 581 | Repeat | Note=HEAT 1 |
| Tgene | >ULK4 | chr9:108358938 | chr3:41795980 | ENST00000420927 | - | 0 | 18 | 926_964 | -39 | 581 | Repeat | Note=HEAT 2 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >FKTN | chr9:108358938 | chr3:41795980 | ENST00000223528 | + | 3 | 10 | 29_461 | 55 | 462 | Topological domain | Lumenal |
| Hgene | >FKTN | chr9:108358938 | chr3:41795980 | ENST00000357998 | + | 2 | 10 | 29_461 | 55 | 431 | Topological domain | Lumenal |
| Hgene | >FKTN | chr9:108358938 | chr3:41795980 | ENST00000448551 | + | 4 | 12 | 29_461 | 55 | 431 | Topological domain | Lumenal |
| Hgene | >FKTN | chr9:108358938 | chr3:41795980 | ENST00000602661 | + | 4 | 11 | 29_461 | 55 | 462 | Topological domain | Lumenal |
| Tgene | ULK4 | chr9:108358938 | chr3:41795980 | ENST00000301831 | - | 20 | 37 | 4_280 | 731 | 1276 | Domain | Protein kinase |
Top |
FusionGeneSequence for FKTN_ULK4 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_FKTN_ENST00000602661_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_600aa MSRINKNVVLALLTLTSSAFLLFQLYYYKHYLSTKNGAGLSKSKGSRIGFDSTQWGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREM LLLSCQARLVMYIERDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVKQLKLCLPLMPVVLHLV TSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTASEEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVE WRLFSLRLLSETTSLLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNPTFTRLVEESKLIPLIF EVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSHICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIV RLALQAQKSGSGEDPQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENVEIFAHLLTSKEDPKEQ >In-frame_FKTN_ENST00000223528_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_600aa MSRINKNVVLALLTLTSSAFLLFQLYYYKHYLSTKNGAGLSKSKGSRIGFDSTQWGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREM LLLSCQARLVMYIERDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVKQLKLCLPLMPVVLHLV TSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTASEEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVE WRLFSLRLLSETTSLLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNPTFTRLVEESKLIPLIF EVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSHICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIV RLALQAQKSGSGEDPQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENVEIFAHLLTSKEDPKEQ >In-frame_FKTN_ENST00000540160_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_600aa MSRINKNVVLALLTLTSSAFLLFQLYYYKHYLSTKNGAGLSKSKGSRIGFDSTQWGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREM LLLSCQARLVMYIERDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVKQLKLCLPLMPVVLHLV TSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTASEEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVE WRLFSLRLLSETTSLLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNPTFTRLVEESKLIPLIF EVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSHICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIV RLALQAQKSGSGEDPQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENVEIFAHLLTSKEDPKEQ >In-frame_FKTN_ENST00000448551_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_600aa MSRINKNVVLALLTLTSSAFLLFQLYYYKHYLSTKNGAGLSKSKGSRIGFDSTQWGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREM LLLSCQARLVMYIERDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVKQLKLCLPLMPVVLHLV TSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTASEEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVE WRLFSLRLLSETTSLLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNPTFTRLVEESKLIPLIF EVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSHICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIV RLALQAQKSGSGEDPQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENVEIFAHLLTSKEDPKEQ >In-frame_FKTN_ENST00000357998_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_600aa MSRINKNVVLALLTLTSSAFLLFQLYYYKHYLSTKNGAGLSKSKGSRIGFDSTQWGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREM LLLSCQARLVMYIERDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVKQLKLCLPLMPVVLHLV TSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTASEEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVE WRLFSLRLLSETTSLLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNPTFTRLVEESKLIPLIF EVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSHICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIV RLALQAQKSGSGEDPQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENVEIFAHLLTSKEDPKEQ |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_FKTN_ENST00000602661_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_1800nt ATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTCAGTTGTACTACTACAAGCAC TATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGGTTTTGTCTCCACA ATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTCTTCTATATATTTTGATTTATAACCGTGAGATG TTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGACCACTCCAGGCAAGGAGCAGCAAAGTGGCAAT GAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCACGAATCCTGGGTGACATTCTTAACTCCTTGGCT AATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTA ACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAACTATTCTTAGTCATATTAAATCTGTAGACTCA GGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGATCACATTGTCAGCTTTTGAAGCAATAATACAG TATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAG TGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTT GATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGCACATTCTTTTAGAACCTGACCCAGTACCAGCA TATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTGTGGAAGAAAGCAAACTGATCCCACTCATTTTT GAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTGCATTACTCAGCAATCTAGTTGCCTGCAAAGAT TCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCACTGAAACTGCCACACTGTGCTTGGATGTGGAC AATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGCACAGCATGCTGACCTATACCTCCGGTATTGTA CGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAGACCTGCTGCTGCTCAACAGACCTCTGACAGAC CTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTTCATCCAAGTGCCTGTCTATACTGGTTCAGCTG TATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATTTACTGACATCCAAGGAGGACCCAAAGGAGCAG AAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCT CTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAG >In-frame_FKTN_ENST00000223528_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_1800nt ATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTCAGTTGTACTACTACAAGCAC TATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGGTTTTGTCTCCACA ATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTCTTCTATATATTTTGATTTATAACCGTGAGATG TTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGACCACTCCAGGCAAGGAGCAGCAAAGTGGCAAT GAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCACGAATCCTGGGTGACATTCTTAACTCCTTGGCT AATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTA ACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAACTATTCTTAGTCATATTAAATCTGTAGACTCA GGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGATCACATTGTCAGCTTTTGAAGCAATAATACAG TATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAG TGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTT GATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGCACATTCTTTTAGAACCTGACCCAGTACCAGCA TATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTGTGGAAGAAAGCAAACTGATCCCACTCATTTTT GAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTGCATTACTCAGCAATCTAGTTGCCTGCAAAGAT TCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCACTGAAACTGCCACACTGTGCTTGGATGTGGAC AATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGCACAGCATGCTGACCTATACCTCCGGTATTGTA CGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAGACCTGCTGCTGCTCAACAGACCTCTGACAGAC CTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTTCATCCAAGTGCCTGTCTATACTGGTTCAGCTG TATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATTTACTGACATCCAAGGAGGACCCAAAGGAGCAG AAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCT CTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAG >In-frame_FKTN_ENST00000540160_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_1800nt ATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTCAGTTGTACTACTACAAGCAC TATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGGTTTTGTCTCCACA ATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTCTTCTATATATTTTGATTTATAACCGTGAGATG TTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGACCACTCCAGGCAAGGAGCAGCAAAGTGGCAAT GAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCACGAATCCTGGGTGACATTCTTAACTCCTTGGCT AATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTA ACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAACTATTCTTAGTCATATTAAATCTGTAGACTCA GGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGATCACATTGTCAGCTTTTGAAGCAATAATACAG TATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAG TGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTT GATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGCACATTCTTTTAGAACCTGACCCAGTACCAGCA TATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTGTGGAAGAAAGCAAACTGATCCCACTCATTTTT GAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTGCATTACTCAGCAATCTAGTTGCCTGCAAAGAT TCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCACTGAAACTGCCACACTGTGCTTGGATGTGGAC AATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGCACAGCATGCTGACCTATACCTCCGGTATTGTA CGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAGACCTGCTGCTGCTCAACAGACCTCTGACAGAC CTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTTCATCCAAGTGCCTGTCTATACTGGTTCAGCTG TATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATTTACTGACATCCAAGGAGGACCCAAAGGAGCAG AAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCT CTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAG >In-frame_FKTN_ENST00000448551_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_1800nt ATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTCAGTTGTACTACTACAAGCAC TATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGGTTTTGTCTCCACA ATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTCTTCTATATATTTTGATTTATAACCGTGAGATG TTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGACCACTCCAGGCAAGGAGCAGCAAAGTGGCAAT GAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCACGAATCCTGGGTGACATTCTTAACTCCTTGGCT AATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTA ACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAACTATTCTTAGTCATATTAAATCTGTAGACTCA GGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGATCACATTGTCAGCTTTTGAAGCAATAATACAG TATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAG TGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTT GATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGCACATTCTTTTAGAACCTGACCCAGTACCAGCA TATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTGTGGAAGAAAGCAAACTGATCCCACTCATTTTT GAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTGCATTACTCAGCAATCTAGTTGCCTGCAAAGAT TCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCACTGAAACTGCCACACTGTGCTTGGATGTGGAC AATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGCACAGCATGCTGACCTATACCTCCGGTATTGTA CGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAGACCTGCTGCTGCTCAACAGACCTCTGACAGAC CTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTTCATCCAAGTGCCTGTCTATACTGGTTCAGCTG TATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATTTACTGACATCCAAGGAGGACCCAAAGGAGCAG AAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCT CTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAG >In-frame_FKTN_ENST00000357998_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_1800nt ATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTCAGTTGTACTACTACAAGCAC TATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGGTTTTGTCTCCACA ATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTCTTCTATATATTTTGATTTATAACCGTGAGATG TTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGACCACTCCAGGCAAGGAGCAGCAAAGTGGCAAT GAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCACGAATCCTGGGTGACATTCTTAACTCCTTGGCT AATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTA ACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAACTATTCTTAGTCATATTAAATCTGTAGACTCA GGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGATCACATTGTCAGCTTTTGAAGCAATAATACAG TATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAG TGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTT GATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGCACATTCTTTTAGAACCTGACCCAGTACCAGCA TATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTGTGGAAGAAAGCAAACTGATCCCACTCATTTTT GAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTGCATTACTCAGCAATCTAGTTGCCTGCAAAGAT TCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCACTGAAACTGCCACACTGTGCTTGGATGTGGAC AATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGCACAGCATGCTGACCTATACCTCCGGTATTGTA CGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAGACCTGCTGCTGCTCAACAGACCTCTGACAGAC CTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTTCATCCAAGTGCCTGTCTATACTGGTTCAGCTG TATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATTTACTGACATCCAAGGAGGACCCAAAGGAGCAG AAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCT CTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_FKTN_ENST00000602661_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_2338nt GTAAAGCGGAGCGGCTGCAGCCTGCTGTTGAGTGAGATTGAAAGGAAACACACTGAATGAGGAAAAACTAACATACGGTCATCAACATCC TTGTATAACCTAGTTTTTAAAAAAATTGGATTTCAAAGAAAACAAAATTATCTTCCTTTCCAAATCCAAAAAGATGAAAACGACTGAGAT ACTTTCAAAAGACAACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCT GCATTTCTGCTGTTTCAGTTGTACTACTACAAGCACTATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATT GGATTTGATAGCACACAGTGGGGTTTTGTCTCCACAATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTG GTTCTTCTATATATTTTGATTTATAACCGTGAGATGTTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGA AAGACCACTCCAGGCAAGGAGCAGCAAAGTGGCAATGAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTG CCACGAATCCTGGGTGACATTCTTAACTCCTTGGCTAATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTG TGTCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTAACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTAT GGAACTATTCTTAGTCATATTAAATCTGTAGACTCAGGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATC AAGATCACATTGTCAGCTTTTGAAGCAATAATACAGTATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCA CCCTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAGTGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAAC CAGGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTTGATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTAT GAGCACATTCTTTTAGAACCTGACCCAGTACCAGCATATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGA CTTGTGGAAGAAAGCAAACTGATCCCACTCATTTTTGAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTG ATTGCATTACTCAGCAATCTAGTTGCCTGCAAAGATTCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTG CTCACTGAAACTGCCACACTGTGCTTGGATGTGGACAATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATT TTGCACAGCATGCTGACCTATACCTCCGGTATTGTACGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCA GAAGACCTGCTGCTGCTCAACAGACCTCTGACAGACCTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGAT GTTTCATCCAAGTGCCTGTCTATACTGGTTCAGCTGTATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCT CATTTACTGACATCCAAGGAGGACCCAAAGGAGCAGAAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTG GAGAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCTCTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCC TTGGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAGGCAAGAAGGTGCTTAGCACAAGCCCGCCCTGTGGCCCCAGCCCTCGGATGCATA AGCAAGGTCAGCTCCCAGACACCTTTGCCACATCCCCTCACAGCTGTCTTTGGACCTAATAAAGTCAGCTTAACCCAGAACCTGGTGGCC CAAGTGCTCACTAACCCCAGGGCCTAGAAAACTGACTCAGAATGGACTTCCTTGGTTCCTGTGGAATGCATCTGGGAAGCCCAGGTTTGT >In-frame_FKTN_ENST00000223528_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_2246nt GTAAAGCGGAGCGGCTGCAGCCTGCTGTTGAGTGAGAAAACAAAATTATCTTCCTTTCCAAATCCAAAAAGATGAAAACGACTGAGATAC TTTCAAAAGACAACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGC ATTTCTGCTGTTTCAGTTGTACTACTACAAGCACTATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG ATTTGATAGCACACAGTGGGGTTTTGTCTCCACAATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGT TCTTCTATATATTTTGATTTATAACCGTGAGATGTTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAA GACCACTCCAGGCAAGGAGCAGCAAAGTGGCAATGAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCC ACGAATCCTGGGTGACATTCTTAACTCCTTGGCTAATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTG TCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTAACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGG AACTATTCTTAGTCATATTAAATCTGTAGACTCAGGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAA GATCACATTGTCAGCTTTTGAAGCAATAATACAGTATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACC CTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAGTGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCA GGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTTGATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGA GCACATTCTTTTAGAACCTGACCCAGTACCAGCATATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACT TGTGGAAGAAAGCAAACTGATCCCACTCATTTTTGAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGAT TGCATTACTCAGCAATCTAGTTGCCTGCAAAGATTCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCT CACTGAAACTGCCACACTGTGCTTGGATGTGGACAATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTT GCACAGCATGCTGACCTATACCTCCGGTATTGTACGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGA AGACCTGCTGCTGCTCAACAGACCTCTGACAGACCTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGT TTCATCCAAGTGCCTGTCTATACTGGTTCAGCTGTATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCA TTTACTGACATCCAAGGAGGACCCAAAGGAGCAGAAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGA GAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCTCTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTT GGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAGGCAAGAAGGTGCTTAGCACAAGCCCGCCCTGTGGCCCCAGCCCTCGGATGCATAAG CAAGGTCAGCTCCCAGACACCTTTGCCACATCCCCTCACAGCTGTCTTTGGACCTAATAAAGTCAGCTTAACCCAGAACCTGGTGGCCCA AGTGCTCACTAACCCCAGGGCCTAGAAAACTGACTCAGAATGGACTTCCTTGGTTCCTGTGGAATGCATCTGGGAAGCCCAGGTTTGTTA >In-frame_FKTN_ENST00000540160_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_2244nt AAAGCGGAGCGGCTGCAGCCTGCTGTTGAGTGAGAAAACAAAATTATCTTCCTTTCCAAATCCAAAAAGATGAAAACGACTGAGATACTT TCAAAAGACAACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCAT TTCTGCTGTTTCAGTTGTACTACTACAAGCACTATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGAT TTGATAGCACACAGTGGGGTTTTGTCTCCACAATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTC TTCTATATATTTTGATTTATAACCGTGAGATGTTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGA CCACTCCAGGCAAGGAGCAGCAAAGTGGCAATGAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCAC GAATCCTGGGTGACATTCTTAACTCCTTGGCTAATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTC TCCCCCTGATGCCTGTAGTGCTTCACCTCGTAACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAA CTATTCTTAGTCATATTAAATCTGTAGACTCAGGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGA TCACATTGTCAGCTTTTGAAGCAATAATACAGTATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCT TGGTGTCCTTGGTTCAAAGCCAAAATGTGGAGTGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGG AGTTTGGGGATGGCAAGGAGAAGGCCAGTGTTGATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGC ACATTCTTTTAGAACCTGACCCAGTACCAGCATATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTG TGGAAGAAAGCAAACTGATCCCACTCATTTTTGAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTG CATTACTCAGCAATCTAGTTGCCTGCAAAGATTCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCA CTGAAACTGCCACACTGTGCTTGGATGTGGACAATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGC ACAGCATGCTGACCTATACCTCCGGTATTGTACGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAG ACCTGCTGCTGCTCAACAGACCTCTGACAGACCTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTT CATCCAAGTGCCTGTCTATACTGGTTCAGCTGTATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATT TACTGACATCCAAGGAGGACCCAAAGGAGCAGAAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGA GCCTCAAGAATGCAGGCAGCCTCCTGCGGGCTCTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGG CCCTGGAAATCCTCCAAGCCGTTGGGCACTAGGCAAGAAGGTGCTTAGCACAAGCCCGCCCTGTGGCCCCAGCCCTCGGATGCATAAGCA AGGTCAGCTCCCAGACACCTTTGCCACATCCCCTCACAGCTGTCTTTGGACCTAATAAAGTCAGCTTAACCCAGAACCTGGTGGCCCAAG TGCTCACTAACCCCAGGGCCTAGAAAACTGACTCAGAATGGACTTCCTTGGTTCCTGTGGAATGCATCTGGGAAGCCCAGGTTTGTTAGC >In-frame_FKTN_ENST00000448551_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_2336nt AAAGCGGAGCGGCTGCAGCCTGCTGTTGAGTGAGATTGAAAGGAAACACACTGAATGAGGAAAAACTAACATACGGTCATCAACATCCTT GTATAACCTAGTTTTTAAAAAAATTGGATTTCAAAGAAAACAAAATTATCTTCCTTTCCAAATCCAAAAAGATGAAAACGACTGAGATAC TTTCAAAAGACAACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGC ATTTCTGCTGTTTCAGTTGTACTACTACAAGCACTATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG ATTTGATAGCACACAGTGGGGTTTTGTCTCCACAATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGT TCTTCTATATATTTTGATTTATAACCGTGAGATGTTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAA GACCACTCCAGGCAAGGAGCAGCAAAGTGGCAATGAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCC ACGAATCCTGGGTGACATTCTTAACTCCTTGGCTAATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTG TCTCCCCCTGATGCCTGTAGTGCTTCACCTCGTAACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGG AACTATTCTTAGTCATATTAAATCTGTAGACTCAGGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAA GATCACATTGTCAGCTTTTGAAGCAATAATACAGTATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACC CTTGGTGTCCTTGGTTCAAAGCCAAAATGTGGAGTGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCA GGAGTTTGGGGATGGCAAGGAGAAGGCCAGTGTTGATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGA GCACATTCTTTTAGAACCTGACCCAGTACCAGCATATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACT TGTGGAAGAAAGCAAACTGATCCCACTCATTTTTGAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGAT TGCATTACTCAGCAATCTAGTTGCCTGCAAAGATTCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCT CACTGAAACTGCCACACTGTGCTTGGATGTGGACAATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTT GCACAGCATGCTGACCTATACCTCCGGTATTGTACGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGA AGACCTGCTGCTGCTCAACAGACCTCTGACAGACCTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGT TTCATCCAAGTGCCTGTCTATACTGGTTCAGCTGTATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCA TTTACTGACATCCAAGGAGGACCCAAAGGAGCAGAAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGA GAGCCTCAAGAATGCAGGCAGCCTCCTGCGGGCTCTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTT GGCCCTGGAAATCCTCCAAGCCGTTGGGCACTAGGCAAGAAGGTGCTTAGCACAAGCCCGCCCTGTGGCCCCAGCCCTCGGATGCATAAG CAAGGTCAGCTCCCAGACACCTTTGCCACATCCCCTCACAGCTGTCTTTGGACCTAATAAAGTCAGCTTAACCCAGAACCTGGTGGCCCA AGTGCTCACTAACCCCAGGGCCTAGAAAACTGACTCAGAATGGACTTCCTTGGTTCCTGTGGAATGCATCTGGGAAGCCCAGGTTTGTTA >In-frame_FKTN_ENST00000357998_chr9_108358938_+_ULK4_ENST00000301831_chr3_41795980_-_2238nt TCTTTAAAAATATCTTTTTTGTTCACAGAAAACAAAATTATCTTCCTTTCCAAATCCAAAAAGATGAAAACGACTGAGATACTTTCAAAA GACAACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC TGTTTCAGTTGTACTACTACAAGCACTATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATA GCACACAGTGGGGTTTTGTCTCCACAATTATCCGTTTACTTGACAGCCCCTCAACATGCATTAGAGCAAAAGCCTTCCTGGTTCTTCTAT ATATTTTGATTTATAACCGTGAGATGTTGCTGCTCAGTTGCCAAGCAAGACTGGTGATGTACATCGAGAGAGACAGCAGAAAGACCACTC CAGGCAAGGAGCAGCAAAGTGGCAATGAATACCTGTCCAAATGCCTGGATCTTCTCATCTGTCACATTGTGCAGGAGCTGCCACGAATCC TGGGTGACATTCTTAACTCCTTGGCTAATGTTTCTGGACGTAAACACCCATCAACAGTTCAAGTGAAACAGCTGAAGTTGTGTCTCCCCC TGATGCCTGTAGTGCTTCACCTCGTAACTTCACAGGTATTTCGACCTCAAGTTGTGACAGAAGAGTTTCTTTTCAGCTATGGAACTATTC TTAGTCATATTAAATCTGTAGACTCAGGAGAAACGAACATAGATGGAGCCATAGGACTGACAGCATCAGAAGAATTTATCAAGATCACAT TGTCAGCTTTTGAAGCAATAATACAGTATCCTATTTTATTGAAAGACTATCGCTCCACGGTTGTTGACTATATACTGCCACCCTTGGTGT CCTTGGTTCAAAGCCAAAATGTGGAGTGGAGACTCTTTAGCTTGCGGTTGCTCTCAGAAACCACATCTCTACTCGTGAACCAGGAGTTTG GGGATGGCAAGGAGAAGGCCAGTGTTGATTCTGACAGCAATCTTCTGGCTCTCATTCGAGATGTCTTACTTCCCCAGTATGAGCACATTC TTTTAGAACCTGACCCAGTACCAGCATATGCTCTGAAACTGCTAGTCGCGATGACTGAACACAACCCAACTTTCACAAGACTTGTGGAAG AAAGCAAACTGATCCCACTCATTTTTGAAGTAACTCTGGAACATCAGGAGAGCATTCTGGGTAATACCATGCAAAGTGTGATTGCATTAC TCAGCAATCTAGTTGCCTGCAAAGATTCGAATATGGAACTACTTTATGAACAAGGACTTGTCAGTCACATCTGTAACCTGCTCACTGAAA CTGCCACACTGTGCTTGGATGTGGACAATAAAAACAACAATGAGATGGCAGCTCCACTGCTCTTTTCCCTGCTTGATATTTTGCACAGCA TGCTGACCTATACCTCCGGTATTGTACGGCTGGCTTTGCAGGCCCAGAAGTCTGGCTCAGGAGAGGACCCTCAGGCTGCAGAAGACCTGC TGCTGCTCAACAGACCTCTGACAGACCTGATTAGCCTGCTCATTCCACTGCTTCCTAATGAAGATCCTGAGATTTTTGATGTTTCATCCA AGTGCCTGTCTATACTGGTTCAGCTGTATGGAGGGGAAAACCCGGACAGCCTCTCTCCTGAAAATGTGGAAATTTTTGCTCATTTACTGA CATCCAAGGAGGACCCAAAGGAGCAGAAGCTTCTGTTAAGGATTCTCAGAAGAATGATCACCTCCAATGAGAAGCACTTGGAGAGCCTCA AGAATGCAGGCAGCCTCCTGCGGGCTCTGGAGCGGCTGGCCCCTGGGAGTGGTTCATTTGCCGACAGTGCGGTGGCTCCCTTGGCCCTGG AAATCCTCCAAGCCGTTGGGCACTAGGCAAGAAGGTGCTTAGCACAAGCCCGCCCTGTGGCCCCAGCCCTCGGATGCATAAGCAAGGTCA GCTCCCAGACACCTTTGCCACATCCCCTCACAGCTGTCTTTGGACCTAATAAAGTCAGCTTAACCCAGAACCTGGTGGCCCAAGTGCTCA CTAACCCCAGGGCCTAGAAAACTGACTCAGAATGGACTTCCTTGGTTCCTGTGGAATGCATCTGGGAAGCCCAGGTTTGTTAGCTGTTCT 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FusionGenePPI for FKTN_ULK4 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| FKTN | CNBP, HLA-DPA1, TMEM5, B4GAT1 | ULK4 | APP, UBE2V1, SULT1A4, YWHAQ, ANKRD40 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FKTN_ULK4 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FKTN_ULK4 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | FKTN | C1969040 | MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2M | 4 | CTD_human;ORPHANET;UNIPROT |
| Hgene | FKTN | C2751052 | MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITHOUT MENTAL RETARDATION), TYPE B, 4 | 3 | CTD_human;UNIPROT |
| Hgene | FKTN | C0410174 | Fukuyama Type Congenital Muscular Dystrophy | 2 | CTD_human;ORPHANET;UNIPROT |
| Hgene | FKTN | C0026850 | Muscular Dystrophy | 1 | CTD_human;HPO |
| Hgene | FKTN | C1969024 | CARDIOMYOPATHY, DILATED, 1X | 1 | CTD_human;UNIPROT |
| Tgene | ULK4 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
| Tgene | ULK4 | C0026764 | Multiple Myeloma | 1 | CTD_human |
| Tgene | ULK4 | C0036341 | Schizophrenia | 1 | PSYGENET |
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