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Fusion gene ID: 13335 |
FusionGeneSummary for FGB_STAT6 |
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Fusion gene information | Fusion gene name: FGB_STAT6 | Fusion gene ID: 13335 | Hgene | Tgene | Gene symbol | FGB | STAT6 | Gene ID | 2244 | 6778 |
Gene name | fibrinogen beta chain | signal transducer and activator of transcription 6 | |
Synonyms | HEL-S-78p | D12S1644|IL-4-STAT|STAT6B|STAT6C | |
Cytomap | 4q31.3 | 12q13.3 | |
Type of gene | protein-coding | protein-coding | |
Description | fibrinogen beta chainbeta-fibrinogenepididymis secretory sperm binding protein Li 78pfibrinogen, B beta polypeptide | signal transducer and activator of transcription 6STAT, interleukin4-inducedsignal transducer and activator of transcription 6, interleukin-4 inducedtranscription factor IL-4 STAT | |
Modification date | 20180520 | 20180519 | |
UniProtAcc | P02675 | P42226 | |
Ensembl transtripts involved in fusion gene | ENST00000302068, ENST00000509493, ENST00000502545, | ENST00000300134, ENST00000538913, ENST00000543873, ENST00000556155, ENST00000537215, ENST00000454075, | |
Fusion gene scores | * DoF score | 6 X 6 X 3=108 | 37 X 8 X 15=4440 |
# samples | 8 | 43 | |
** MAII score | log2(8/108*10)=-0.432959407276106 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(43/4440*10)=-3.36815111164801 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FGB [Title/Abstract] AND STAT6 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FGB | GO:0007160 | cell-matrix adhesion | 10903502 |
Hgene | FGB | GO:0031639 | plasminogen activation | 16846481 |
Hgene | FGB | GO:0034116 | positive regulation of heterotypic cell-cell adhesion | 8100742 |
Hgene | FGB | GO:0034622 | cellular protein-containing complex assembly | 8910396 |
Hgene | FGB | GO:0042730 | fibrinolysis | 16846481 |
Hgene | FGB | GO:0043152 | induction of bacterial agglutination | 24367264 |
Hgene | FGB | GO:0045907 | positive regulation of vasoconstriction | 15739255 |
Hgene | FGB | GO:0045921 | positive regulation of exocytosis | 19193866 |
Hgene | FGB | GO:0050714 | positive regulation of protein secretion | 19193866 |
Hgene | FGB | GO:0051258 | protein polymerization | 12706644 |
Hgene | FGB | GO:0051592 | response to calcium ion | 6777381 |
Hgene | FGB | GO:0070374 | positive regulation of ERK1 and ERK2 cascade | 10903502|19193866 |
Hgene | FGB | GO:0070527 | platelet aggregation | 6281794 |
Hgene | FGB | GO:0072378 | blood coagulation, fibrin clot formation | 16846481 |
Hgene | FGB | GO:0090277 | positive regulation of peptide hormone secretion | 19193866 |
Hgene | FGB | GO:1902042 | negative regulation of extrinsic apoptotic signaling pathway via death domain receptors | 10903502 |
Hgene | FGB | GO:2000352 | negative regulation of endothelial cell apoptotic process | 10903502 |
Tgene | STAT6 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 8810328 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LIHC | TCGA-BC-4073-01B | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000302068 | ENST00000300134 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
5CDS-intron | ENST00000302068 | ENST00000538913 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
5CDS-intron | ENST00000302068 | ENST00000543873 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
5CDS-intron | ENST00000302068 | ENST00000556155 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
5CDS-intron | ENST00000302068 | ENST00000537215 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
5CDS-intron | ENST00000302068 | ENST00000454075 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000509493 | ENST00000300134 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000509493 | ENST00000538913 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000509493 | ENST00000543873 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000509493 | ENST00000556155 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000509493 | ENST00000537215 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000509493 | ENST00000454075 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000502545 | ENST00000300134 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000502545 | ENST00000538913 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000502545 | ENST00000543873 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000502545 | ENST00000556155 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000502545 | ENST00000537215 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
intron-intron | ENST00000502545 | ENST00000454075 | FGB | chr4 | 155492238 | + | STAT6 | chr12 | 57496773 | - |
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FusionProtFeatures for FGB_STAT6 |
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Hgene | Tgene |
FGB | STAT6 |
Cleaved by the protease thrombin to yield monomerswhich, together with fibrinogen alpha (FGA) and fibrinogen gamma(FGG), polymerize to form an insoluble fibrin matrix. Fibrin has amajor function in hemostasis as one of the primary components ofblood clots. In addition, functions during the early stages ofwound repair to stabilize the lesion and guide cell migrationduring re-epithelialization. Was originally thought to beessential for platelet aggregation, based on in vitro studiesusing anticoagulated blood. However subsequent studies have shownthat it is not absolutely required for thrombus formation in vivo.Enhances expression of SELP in activated platelets. Maternalfibrinogen is essential for successful pregnancy. Fibrindeposition is also associated with infection, where it protectsagainst IFNG-mediated hemorrhage. May also facilitate theantibacterial immune response via both innate and T-cell mediatedpathways. {ECO:0000250|UniProtKB:E9PV24}. | Carries out a dual function: signal transduction andactivation of transcription. Involved in IL4/interleukin-4- andIL3/interleukin-3-mediated signaling.{ECO:0000269|PubMed:17210636}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for FGB_STAT6 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for FGB_STAT6 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FGB | CALR, FGG, FGA, NID1, FBLN1, LPA, KHDRBS2, MIS12, GRB7, AIMP2, TK1, CDKN1A, SMN1, PIK3R3, ANXA7, FN1, CSNK2B, ASB6, ASB7, ASCC1, DDX19B, TMEM237, ALDH2, HIST1H2BJ, SBDS, MAPK6, SNX27, SPR, ADK, NARS, OXSR1, RING1, NAA15, NME2, POU2F1, SLK, TCEA1, EIF2A, BLVRB, CTNNBL1, TBC1D24, MAP2K1, UBLCP1, SNX3, ARHGAP1, ATG3, CCNYL1, VRK1, PMVK, PPID, MCTS1, PUS7, C6orf211, EEF1A2, PIR, PAK2, ITPA, LZIC, DUSP3, HDLBP, ADSL, DENR, HMGCS1, KIF2A, ETF1, FEN1, UBE2T, GCA, LETM1, WIBG, PSME2, CTH, OTUB1, FTO, HDGFRP2, GPKOW, PNPO, VPS26A, NAA50, RBM12, KIAA1143, EIF3J, HSP90AA4P, PRKCI, SF3A1, RPRD1A, PAPSS1, TLN1, UBA1, RPRD1B, FARSB, NME2P1, USO1, DDAH1, PBK, CAB39, RHOA, PTPN11, TES, PYGB, DIS3, SCRN1, PAK1, GNAQ, SYAP1, SNX6, PAPOLA, LSM1, GLS, GTF2F1, GNL1 | STAT6 | NCOA1, CREBBP, IRF4, EP300, NFKB1, SND1, ANXA2, TP53, STAT3, TRIM24, DAZAP2, CEBPZ, WWP1, RLIM, ANKZF1, ZNF407, ZBTB2, ZNF92, PARP14, NCOA3, NCOA2, JUN, SFPQ, IGHE, FCER2, CEBPE, SSSCA1, SRXN1, PPM1G, RAD23B, SEC24A, NUBP2, AHCYL1, DSTN, IGBP1, SH3BGRL, PSAT1, STAT2, IFNAR1, IL4R, IFNG, JAK1, PTPN2, VKORC1, LITAF, JAK3, TRIM28, RCN3, EEF1A1, API5, EHD1, PDE12, PGGT1B, USP8, PPARG, KDM3A, AACS, GART, TSTA3, KIF22, POLK |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FGB_STAT6 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | FGB | P02675 | DB00364 | Sucralfate | Fibrinogen beta chain | small molecule | approved |
Hgene | FGB | P02675 | DB13151 | Anti-inhibitor coagulant complex | Fibrinogen beta chain | biotech | approved|investigational |
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RelatedDiseases for FGB_STAT6 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | FGB | C2584774 | Congenital hypofibrinogenemia | 4 | ORPHANET;UNIPROT |
Hgene | FGB | C0029456 | Osteoporosis | 1 | CTD_human |
Hgene | FGB | C0030567 | Parkinson Disease | 1 | CTD_human |
Hgene | FGB | C0272350 | Dysfibrinogenemia, Congenital | 1 | ORPHANET;UNIPROT |
Tgene | STAT6 | C1266119 | Solitary fibrous tumor | 2 | CTD_human |
Tgene | STAT6 | C0011615 | Dermatitis, Atopic | 1 | CTD_human |
Tgene | STAT6 | C0013604 | Edema | 1 | CTD_human |
Tgene | STAT6 | C0018671 | Head and Neck Neoplasms | 1 | CTD_human |