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Fusion gene ID: 12942 |
FusionGeneSummary for FARP1_NME1-NME2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: FARP1_NME1-NME2 | Fusion gene ID: 12942 | Hgene | Tgene | Gene symbol | FARP1 | NME1-NME2 | Gene ID | 10160 | 654364 |
| Gene name | FERM, ARH/RhoGEF and pleckstrin domain protein 1 | NME1-NME2 readthrough | |
| Synonyms | CDEP|FARP1-IT1|PLEKHC2|PPP1R75 | NM23-LV|NMELV | |
| Cytomap | 13q32.2 | 17q21.33 | |
| Type of gene | protein-coding | protein-coding | |
| Description | FERM, ARHGEF and pleckstrin domain-containing protein 1FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)FERM, RhoGEF and pleckstrin domain-containing protein 1PH domain-containing family C member 2chondrocyte-derived ezrin-li | NME1-NME2 proteinNME1-NME2 readthrough transcript | |
| Modification date | 20180519 | 20180519 | |
| UniProtAcc | Q9Y4F1 | ||
| Ensembl transtripts involved in fusion gene | ENST00000595437, ENST00000376586, ENST00000319562, ENST00000376581, ENST00000593990, | ENST00000393198, ENST00000608447, ENST00000514264, ENST00000393185, ENST00000513177, ENST00000512737, ENST00000503064, ENST00000393183, ENST00000393190, | |
| Fusion gene scores | * DoF score | 14 X 11 X 7=1078 | 2 X 2 X 2=8 |
| # samples | 13 | 2 | |
| ** MAII score | log2(13/1078*10)=-3.05177364972405 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
| Context | PubMed: FARP1 [Title/Abstract] AND NME1-NME2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | FARP1 | GO:0010923 | negative regulation of phosphatase activity | 19389623 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | LGG | TCGA-DB-5275-01A | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000595437 | ENST00000393198 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000595437 | ENST00000608447 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000514264 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000393185 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000513177 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000512737 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000503064 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000393183 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000595437 | ENST00000393190 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000376586 | ENST00000393198 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000376586 | ENST00000608447 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000514264 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000393185 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000513177 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000512737 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000503064 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000393183 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376586 | ENST00000393190 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000319562 | ENST00000393198 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000319562 | ENST00000608447 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000514264 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000393185 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000513177 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000512737 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000503064 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000393183 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000319562 | ENST00000393190 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000376581 | ENST00000393198 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| In-frame | ENST00000376581 | ENST00000608447 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000514264 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000393185 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000513177 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000512737 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000503064 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000393183 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| 5CDS-intron | ENST00000376581 | ENST00000393190 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-3CDS | ENST00000593990 | ENST00000393198 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-3CDS | ENST00000593990 | ENST00000608447 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000514264 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000393185 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000513177 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000512737 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000503064 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000393183 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
| intron-intron | ENST00000593990 | ENST00000393190 | FARP1 | chr13 | 98865667 | + | NME1-NME2 | chr17 | 49237341 | + |
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FusionProtFeatures for FARP1_NME1-NME2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| FARP1 | NME1-NME2 |
| Functions as guanine nucleotide exchange factor forRAC1. May play a role in semaphorin signaling. Plays a role in theassembly and disassembly of dendritic filopodia, the formation ofdendritic spines, regulation of dendrite length and ultimately theformation of synapses (By similarity). {ECO:0000250}. | Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000319562 | + | 2 | 27 | 449_453 | 57 | 1046 | Compositional bias | Note=Poly-Glu |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000376581 | + | 2 | 3 | 449_453 | 57 | 130 | Compositional bias | Note=Poly-Glu |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000319562 | + | 2 | 27 | 40_320 | 57 | 1046 | Domain | FERM |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000319562 | + | 2 | 27 | 540_730 | 57 | 1046 | Domain | DH |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000319562 | + | 2 | 27 | 759_856 | 57 | 1046 | Domain | PH 1 |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000319562 | + | 2 | 27 | 932_1029 | 57 | 1046 | Domain | PH 2 |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000376581 | + | 2 | 3 | 40_320 | 57 | 130 | Domain | FERM |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000376581 | + | 2 | 3 | 540_730 | 57 | 130 | Domain | DH |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000376581 | + | 2 | 3 | 759_856 | 57 | 130 | Domain | PH 1 |
| Hgene | >FARP1 | chr13:98865667 | chr17:49237341 | ENST00000376581 | + | 2 | 3 | 932_1029 | 57 | 130 | Domain | PH 2 |
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FusionGeneSequence for FARP1_NME1-NME2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_FARP1_ENST00000595437_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000595437_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000376586_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000376586_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000319562_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000319562_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000376581_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV >In-frame_FARP1_ENST00000376581_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_283aa MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVA MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQ HYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_FARP1_ENST00000595437_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000595437_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000376586_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000376586_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000319562_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000319562_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000376581_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT >In-frame_FARP1_ENST00000376581_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_849nt ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAG CCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAA GATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCC ATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGT GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTG GTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAG CACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGG CTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATT CAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_FARP1_ENST00000595437_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_1227nt AAGTCCCGCGCAGCCCGGGGTGGTGCCGGAAGCCCGTGCCTGTGGCTCCGGGGGAGGGGAGGGCTCGGTGGGTCCCTGAAGACTGTCCTC CCCGCGCGACGTCGCAGGCGAAGCAGCCCCAGGCAGGACCTCAAAAAGCGACCTGCAGAGTCCGAGCCCCTGACCGCCCGCCTGCCGCTC CCGGCTTCGCCGTGCACACGTCTCCCGCTCTCCCCGATATTCTCTAAGCCGCTTTCATCATGGGAGAAATAGAGCAGAGGCCGACCCCAG GATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAACTCGTGT CCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCTTCTCAAGGAACACTACGTTGACCTGA AGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGTCTGGGAGGGGCTGAATGTGGTGAAGA CGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGACTTCTGCATACAAGTTGGCAGGACCA TGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCGCTTCGAGCAGA AGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTACATTGACCTGAAAGACCGACCATTCT TCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGTGATGC TTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCATTCATGGCAGTG ATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCATGACTGGGTCT ATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAGCTCTTCATTCCATTGACTTAGAGGCA >In-frame_FARP1_ENST00000595437_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_1226nt AAGTCCCGCGCAGCCCGGGGTGGTGCCGGAAGCCCGTGCCTGTGGCTCCGGGGGAGGGGAGGGCTCGGTGGGTCCCTGAAGACTGTCCTC CCCGCGCGACGTCGCAGGCGAAGCAGCCCCAGGCAGGACCTCAAAAAGCGACCTGCAGAGTCCGAGCCCCTGACCGCCCGCCTGCCGCTC CCGGCTTCGCCGTGCACACGTCTCCCGCTCTCCCCGATATTCTCTAAGCCGCTTTCATCATGGGAGAAATAGAGCAGAGGCCGACCCCAG GATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAACTCGTGT CCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCTTCTCAAGGAACACTACGTTGACCTGA AGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGTCTGGGAGGGGCTGAATGTGGTGAAGA CGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGACTTCTGCATACAAGTTGGCAGGACCA TGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCGCTTCGAGCAGA AGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTACATTGACCTGAAAGACCGACCATTCT TCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGTGATGC TTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCATTCATGGCAGTG ATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCATGACTGGGTCT ATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAGCTCTTCATTCCATTGACTTAGAGGCA >In-frame_FARP1_ENST00000376586_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_1324nt GCGGCCGCTGCCCGCTTTGCGCCGCTCCTCCCTGCGCGAGTAGCGCTGGCCCCGGCGTCGAGGCGGCCATGGCGACCCGGAGCCCGCTCC CCACCCACCCCGCCTGCTCCGCCCTCCCCTCCGCCCCGCGCCACCTTTGATGGCTCGGACCTCAGCCGGCCACCGCCAGCCCTGCTCGCG CGCCCGCGCCGCCGCCGCCCGCGGGTATTAATAGCCGGCGCCGCCGCGCCCTCGGCCGCCGGGGGCTTGGGAGCCGCCGATCCCGGAGCC CGAGCCGGGAGAGGGAGCCGCCGCAGCCGCCGGCGCTGTGGAGATATTCTCTAAGCCGCTTTCATCATGGGAGAAATAGAGCAGAGGCCG ACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAA CTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCTTCTCAAGGAACACTACGTT GACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGTCTGGGAGGGGCTGAATGTG GTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGACTTCTGCATACAAGTTGGC AGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCGCTTC GAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTACATTGACCTGAAAGACCGA CCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGA GTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCATTCAT GGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCATGAC TGGGTCTATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAGCTCTTCATTCCATTGACTT >In-frame_FARP1_ENST00000376586_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_1323nt GCGGCCGCTGCCCGCTTTGCGCCGCTCCTCCCTGCGCGAGTAGCGCTGGCCCCGGCGTCGAGGCGGCCATGGCGACCCGGAGCCCGCTCC CCACCCACCCCGCCTGCTCCGCCCTCCCCTCCGCCCCGCGCCACCTTTGATGGCTCGGACCTCAGCCGGCCACCGCCAGCCCTGCTCGCG CGCCCGCGCCGCCGCCGCCCGCGGGTATTAATAGCCGGCGCCGCCGCGCCCTCGGCCGCCGGGGGCTTGGGAGCCGCCGATCCCGGAGCC CGAGCCGGGAGAGGGAGCCGCCGCAGCCGCCGGCGCTGTGGAGATATTCTCTAAGCCGCTTTCATCATGGGAGAAATAGAGCAGAGGCCG ACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAA CTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCTTCTCAAGGAACACTACGTT GACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGTCTGGGAGGGGCTGAATGTG GTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGACTTCTGCATACAAGTTGGC AGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCGCTTC GAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTACATTGACCTGAAAGACCGA CCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGA GTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCATTCAT GGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCATGAC TGGGTCTATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAGCTCTTCATTCCATTGACTT >In-frame_FARP1_ENST00000319562_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_1253nt GCGACCCGGAGCCCGCTCCCCACCCACCCCGCCTGCTCCGCCCTCCCCTCCGCCCCGCGCCACCTTTGATGGCTCGGACCTCAGCCGGCC ACCGCCAGCCCTGCTCGCGCGCCCGCGCCGCCGCCGCCCGCGGGTATTAATAGCCGGCGCCGCCGCGCCCTCGGCCGCCGGGGGCTTGGG AGCCGCCGATCCCGGAGCCCGAGCCGGGAGAGGGAGCCGCCGCAGCCGCCGGCGCTGTGGAGATATTCTCTAAGCCGCTTTCATCATGGG AGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCC CCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCT TCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGT CTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGA CTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGG CGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTA CATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAA CGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGT TGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTA CAAGTCTTGTGCTCATGACTGGGTCTATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAG >In-frame_FARP1_ENST00000319562_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_1252nt GCGACCCGGAGCCCGCTCCCCACCCACCCCGCCTGCTCCGCCCTCCCCTCCGCCCCGCGCCACCTTTGATGGCTCGGACCTCAGCCGGCC ACCGCCAGCCCTGCTCGCGCGCCCGCGCCGCCGCCGCCCGCGGGTATTAATAGCCGGCGCCGCCGCGCCCTCGGCCGCCGGGGGCTTGGG AGCCGCCGATCCCGGAGCCCGAGCCGGGAGAGGGAGCCGCCGCAGCCGCCGGCGCTGTGGAGATATTCTCTAAGCCGCTTTCATCATGGG AGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCC CCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCT TCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGT CTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGA CTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGG CGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTA CATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAA CGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGT TGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTA CAAGTCTTGTGCTCATGACTGGGTCTATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAG >In-frame_FARP1_ENST00000376581_chr13_98865667_+_NME1-NME2_ENST00000393198_chr17_49237341_+_1024nt CGGCGCTGTGGAGATATTCTCTAAGCCGCTTTCATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAA AATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGAT GACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGC CTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAG ACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTC ATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATG AAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATG AACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGAT TCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAA GAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCATGACTGGGTCTATGAATAAGAGGTGGACACAACA GCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAGCTCTTCATTCCATTGACTTAGAGGCAACAGGATTGATCATTCTTTTATA >In-frame_FARP1_ENST00000376581_chr13_98865667_+_NME1-NME2_ENST00000608447_chr17_49237341_+_1023nt CGGCGCTGTGGAGATATTCTCTAAGCCGCTTTCATCATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAA AATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGAT GACACCCAGGAGGCATTTGAAGTTCCAGCTTCCGAAGATCTTCTCAAGGAACACTACGTTGACCTGAAGGACCGTCCATTCTTTGCCGGC CTGGTGAAATACATGCACTCAGGGCCGGTAGTTGCCATGGTCTGGGAGGGGCTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAG ACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCACCTTC ATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATG AAGTTCCTCCGGGCCTCTGAAGAACACCTGAAGCAGCACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATG AACTCAGGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGACCAATCCAGCAGAT TCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAA GAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCATGACTGGGTCTATGAATAAGAGGTGGACACAACA GCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGACACAGCTCTTCATTCCATTGACTTAGAGGCAACAGGATTGATCATTCTTTTATA |
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FusionGenePPI for FARP1_NME1-NME2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| FARP1 | ELAVL1, NTRK1, CAPZA2, MYO1C, PDGFRA, AKAP1, SYNPO, GAR1, GEMIN7, BRD2, PTPRG, SNRPN, SDC1, SDC2, DCAF8, TRIM25 | NME1-NME2 | NME4, NME2, FDPS, HPRT1, IDH1, NME1, TALDO1, AHCY, AKR1A1, AKR1B1, AKR1B15, ENO1, ENO2, ENO3, FKBP1A, FKBP1B, FKBP2, GOT1, ADSS, AK2, CFL1, CFL2, DSTN, HINT1, LDHA, LDHB, LDHC, OAT, PIN1, SNX3, SOD1, TKT, WDR1, HIBCH, PPIF, PRDX5, SNX12, STIP1, TAGLN, TAGLN2, TAGLN3, UBE2V1, TMEM189-UBE2V1, MCM2, NME3 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Tgene | NME1-NME2 | chr13:98865667 | chr17:49237341 | ENST00000393198 | + | 1 | 8 | 1_66 | 42 | 268 | AKAP13 |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FARP1_NME1-NME2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FARP1_NME1-NME2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | FARP1 | C0236969 | Substance-Related Disorders | 1 | CTD_human |
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