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Fusion gene ID: 12648 |
FusionGeneSummary for FAM171B_KYNU |
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Fusion gene information | Fusion gene name: FAM171B_KYNU | Fusion gene ID: 12648 | Hgene | Tgene | Gene symbol | FAM171B | KYNU | Gene ID | 165215 | 8942 |
Gene name | family with sequence similarity 171 member B | kynureninase | |
Synonyms | KIAA1946 | KYNUU|VCRL2 | |
Cytomap | 2q32.1 | 2q22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | protein FAM171B | kynureninaseL-kynurenine hydrolase | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q6P995 | Q16719 | |
Ensembl transtripts involved in fusion gene | ENST00000304698, | ENST00000264170, ENST00000375773, ENST00000409512, ENST00000410015, | |
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 8 X 7 X 6=336 |
# samples | 4 | 10 | |
** MAII score | log2(4/27*10)=0.567040592723894 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(10/336*10)=-1.74846123300404 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FAM171B [Title/Abstract] AND KYNU [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | KYNU | GO:0019805 | quinolinate biosynthetic process | 9291104 |
Tgene | KYNU | GO:0034341 | response to interferon-gamma | 9291104 |
Tgene | KYNU | GO:0043420 | anthranilate metabolic process | 11985583 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-YL-A8S8-01A | FAM171B | chr2 | 187559138 | + | KYNU | chr2 | 143642918 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000304698 | ENST00000264170 | FAM171B | chr2 | 187559138 | + | KYNU | chr2 | 143642918 | + |
5CDS-5UTR | ENST00000304698 | ENST00000375773 | FAM171B | chr2 | 187559138 | + | KYNU | chr2 | 143642918 | + |
5CDS-5UTR | ENST00000304698 | ENST00000409512 | FAM171B | chr2 | 187559138 | + | KYNU | chr2 | 143642918 | + |
5CDS-5UTR | ENST00000304698 | ENST00000410015 | FAM171B | chr2 | 187559138 | + | KYNU | chr2 | 143642918 | + |
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FusionProtFeatures for FAM171B_KYNU |
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Hgene | Tgene |
FAM171B | KYNU |
Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3-hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3-hydroxyanthranilic acid (3-OHAA), respectively. Has a preferencefor the L-3-hydroxy form. Also has cysteine-conjugate-beta-lyaseactivity. {ECO:0000269|PubMed:11985583,ECO:0000269|PubMed:17300176, ECO:0000269|PubMed:28792876,ECO:0000269|PubMed:8706755, ECO:0000269|PubMed:9180257}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for FAM171B_KYNU |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for FAM171B_KYNU |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FAM171B | MPP3, CAMK2D, TMEM17, CDH1, CTDSPL, FAM171A1, FAM171A2, C4A, FGFR2, BMPR1A, STX6, PHKG2, MFAP3, MIB1 | KYNU | TPM3, SMARCD2, COIL, SEC23IP, NUP210, PALM2, SMS, PPM1G, SMEK2, SSU72, ASNS, SIRT1, SGTA, LYN, CNDP2, ADSS, BCCIP, CHORDC1, CSE1L, GDA, GNS, GSR, LDHAL6B, MVD, NAGK, C11orf58, LDHA, NDRG1, PEPD, RPS6KA1, NXF1, ADK, ASS1, CFL1, DSTN, ETFA, FUBP1, GLRX, FH, KHSRP, MEMO1, PPIA, PSAT1, SPR, RET |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FAM171B_KYNU |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | KYNU | Q16719 | DB00114 | Pyridoxal Phosphate | Kynureninase {ECO:0000255|HAMAP-Rule:MF_03017} | small molecule | approved|investigational|nutraceutical |
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RelatedDiseases for FAM171B_KYNU |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | KYNU | C0021368 | Inflammation | 1 | CTD_human |
Tgene | KYNU | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Tgene | KYNU | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | KYNU | C0268474 | Hydroxykynureninuria | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | KYNU | C0344315 | Depressed mood | 1 | PSYGENET |
Tgene | KYNU | C0524851 | Neurodegenerative Disorders | 1 | CTD_human |
Tgene | KYNU | C1269683 | Major Depressive Disorder | 1 | PSYGENET |