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Fusion gene ID: 12386 |
FusionGeneSummary for F11-AS1_ZDHHC16 |
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Fusion gene information | Fusion gene name: F11-AS1_ZDHHC16 | Fusion gene ID: 12386 | Hgene | Tgene | Gene symbol | F11-AS1 | ZDHHC16 | Gene ID | 285441 | 84287 |
Gene name | F11 antisense RNA 1 | zinc finger DHHC-type containing 16 | |
Synonyms | - | APH2|DHHC-16 | |
Cytomap | 4q35.2 | 10q24.1 | |
Type of gene | ncRNA | protein-coding | |
Description | - | palmitoyltransferase ZDHHC16Abl-philin 2probable palmitoyltransferase ZDHHC16zinc finger DHHC domain-containing protein 16zinc finger, DHHC domain containing 16 | |
Modification date | 20180329 | 20180523 | |
UniProtAcc | Q969W1 | ||
Ensembl transtripts involved in fusion gene | ENST00000505103, ENST00000510172, ENST00000508110, ENST00000508287, | ENST00000370854, ENST00000393760, ENST00000370846, ENST00000352634, ENST00000353979, ENST00000370842, ENST00000345745, ENST00000495735, | |
Fusion gene scores | * DoF score | 2 X 2 X 1=4 | 5 X 5 X 4=100 |
# samples | 2 | 5 | |
** MAII score | log2(2/4*10)=2.32192809488736 | log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: F11-AS1 [Title/Abstract] AND ZDHHC16 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ZDHHC16 | GO:0018345 | protein palmitoylation | 23034182|28826475 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BE897132 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-intron | ENST00000505103 | ENST00000370854 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000393760 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000370846 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000352634 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000353979 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000370842 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000345745 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000505103 | ENST00000495735 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000370854 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000393760 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000370846 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000352634 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000353979 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000370842 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000345745 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
intron-intron | ENST00000510172 | ENST00000495735 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000370854 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000393760 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000370846 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000352634 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000353979 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000370842 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000345745 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508110 | ENST00000495735 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000370854 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000393760 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000370846 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000352634 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000353979 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000370842 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000345745 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
5UTR-intron | ENST00000508287 | ENST00000495735 | F11-AS1 | chr4 | 187421999 | - | ZDHHC16 | chr10 | 99212889 | + |
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FusionProtFeatures for F11-AS1_ZDHHC16 |
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Hgene | Tgene |
F11-AS1 | ZDHHC16 |
Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for F11-AS1_ZDHHC16 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for F11-AS1_ZDHHC16 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for F11-AS1_ZDHHC16 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for F11-AS1_ZDHHC16 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |