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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 12293

FusionGeneSummary for EXOC6_EYS

check button Fusion gene summary
Fusion gene informationFusion gene name: EXOC6_EYS
Fusion gene ID: 12293
HgeneTgene
Gene symbol

EXOC6

EYS

Gene ID

54536

346007

Gene nameexocyst complex component 6eyes shut homolog (Drosophila)
SynonymsEXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15pC6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1
Cytomap

10q23.33

6q12

Type of geneprotein-codingprotein-coding
Descriptionexocyst complex component 6SEC15-like 1SEC15-like protein 3exocyst complex component Sec15Arsec15-like proteinprotein eyes shut homologEGF-like-domain, multiple 10EGF-like-domain, multiple 11epidermal growth factor-like protein 10epidermal growth factor-like protein 11protein spacemaker homolog
Modification date2018052320180519
UniProtAcc

Q8TAG9

Q5T1H1

Ensembl transtripts involved in fusion geneENST00000371547, ENST00000371552, 
ENST00000371543, ENST00000443748, 
ENST00000260762, ENST00000497262, 
ENST00000503581, ENST00000370621, 
ENST00000370616, ENST00000393380, 
ENST00000342421, ENST00000370618, 
ENST00000486069, 
Fusion gene scores* DoF score3 X 3 X 3=2726 X 15 X 12=4680
# samples 327
** MAII scorelog2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(27/4680*10)=-4.11547721741994
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: EXOC6 [Title/Abstract] AND EYS [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVTHYMTCGA-X7-A8M0-01AEXOC6chr10

94774024

+EYSchr6

64776384

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
Frame-shiftENST00000371547ENST00000503581EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000371547ENST00000370621EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000371547ENST00000370616EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371547ENST00000393380EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371547ENST00000342421EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371547ENST00000370618EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371547ENST00000486069EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000371552ENST00000503581EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000371552ENST00000370621EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000371552ENST00000370616EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371552ENST00000393380EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371552ENST00000342421EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371552ENST00000370618EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000371552ENST00000486069EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-3CDSENST00000371543ENST00000503581EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-3CDSENST00000371543ENST00000370621EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-3CDSENST00000371543ENST00000370616EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000371543ENST00000393380EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000371543ENST00000342421EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000371543ENST00000370618EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000371543ENST00000486069EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000443748ENST00000503581EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000443748ENST00000370621EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000443748ENST00000370616EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000443748ENST00000393380EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000443748ENST00000342421EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000443748ENST00000370618EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000443748ENST00000486069EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000260762ENST00000503581EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000260762ENST00000370621EXOC6chr10

94774024

+EYSchr6

64776384

-
Frame-shiftENST00000260762ENST00000370616EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000260762ENST00000393380EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000260762ENST00000342421EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000260762ENST00000370618EXOC6chr10

94774024

+EYSchr6

64776384

-
5CDS-intronENST00000260762ENST00000486069EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-3CDSENST00000497262ENST00000503581EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-3CDSENST00000497262ENST00000370621EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-3CDSENST00000497262ENST00000370616EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000497262ENST00000393380EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000497262ENST00000342421EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000497262ENST00000370618EXOC6chr10

94774024

+EYSchr6

64776384

-
intron-intronENST00000497262ENST00000486069EXOC6chr10

94774024

+EYSchr6

64776384

-

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FusionProtFeatures for EXOC6_EYS


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
EXOC6

Q8TAG9

EYS

Q5T1H1

Component of the exocyst complex involved in the dockingof exocytic vesicles with fusion sites on the plasma membrane.Together with RAB11A, RAB3IP, RAB8A, PARD3, PRKCI, ANXA2, CDC42and DNMBP promotes transcytosis of PODXL to the apical membraneinitiation sites (AMIS), apical surface formation andlumenogenesis (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for EXOC6_EYS


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for EXOC6_EYS


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
EXOC6MYO5A, ECSIT, NOS3, APP, EXOSC1, GCDH, LOXL4, PRDX2, EXOC6, MAST1, PSEN2, CYP2C8, RNF32, EXOC3, EXOC2, ALB, EGFR, CA14, DTNBP1, DSN1, SCN2B, EXOC4, EXOC5, EXOC7, EXOC8, NAE1, NTRK1, XRCC3, RAB8A, RAB11A, MYO5B, STX3, TBC1D30, EXOC1, IL1R2, C9orf89, RAP1A, STX11, NPY2R, SIGLECL1, VPS53, CD70, GNAQ, CHRM4, APLNR, IMMT, EXOC6BEYSEGFR


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for EXOC6_EYS


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for EXOC6_EYS


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneEYSC1864446Retinitis Pigmentosa 252CTD_human;UNIPROT
TgeneEYSC0035334Retinitis Pigmentosa1CTD_human;ORPHANET