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Fusion gene ID: 12206 |
FusionGeneSummary for EVC_CRMP1 |
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Fusion gene information | Fusion gene name: EVC_CRMP1 | Fusion gene ID: 12206 | Hgene | Tgene | Gene symbol | EVC | CRMP1 | Gene ID | 2121 | 1400 |
Gene name | EvC ciliary complex subunit 1 | collapsin response mediator protein 1 | |
Synonyms | DWF-1|EVC1|EVCL | CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 | |
Cytomap | 4p16.2 | 4p16.2 | |
Type of gene | protein-coding | protein-coding | |
Description | ellis-van Creveld syndrome proteinEllis van Creveld proteinEllis van Creveld syndrome | dihydropyrimidinase-related protein 1dihydropyrimidinase-like 1unc-33-like phosphoprotein 3 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | P57679 | Q14194 | |
Ensembl transtripts involved in fusion gene | ENST00000264956, ENST00000382674, ENST00000509451, ENST00000515113, | ENST00000324989, ENST00000397890, ENST00000511535, ENST00000512574, | |
Fusion gene scores | * DoF score | 5 X 5 X 3=75 | 6 X 6 X 4=144 |
# samples | 6 | 6 | |
** MAII score | log2(6/75*10)=-0.321928094887362 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/144*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EVC [Title/Abstract] AND CRMP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | CRMP1 | GO:1904530 | negative regulation of actin filament binding | 25358863 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | DA491731 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000264956 | ENST00000324989 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000264956 | ENST00000397890 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000264956 | ENST00000511535 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000264956 | ENST00000512574 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
3UTR-intron | ENST00000382674 | ENST00000324989 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
3UTR-intron | ENST00000382674 | ENST00000397890 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
3UTR-intron | ENST00000382674 | ENST00000511535 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
3UTR-intron | ENST00000382674 | ENST00000512574 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000509451 | ENST00000324989 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000509451 | ENST00000397890 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000509451 | ENST00000511535 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000509451 | ENST00000512574 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000515113 | ENST00000324989 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000515113 | ENST00000397890 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000515113 | ENST00000511535 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
intron-intron | ENST00000515113 | ENST00000512574 | EVC | chr4 | 5830323 | - | CRMP1 | chr4 | 5889985 | - |
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FusionProtFeatures for EVC_CRMP1 |
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Hgene | Tgene |
EVC | CRMP1 |
Component of the EvC complex that positively regulatesciliary Hedgehog (Hh) signaling. Involved in endochondral growthand skeletal development. {ECO:0000250|UniProtKB:P57680}. | Necessary for signaling by class 3 semaphorins andsubsequent remodeling of the cytoskeleton. Plays a role in axonguidance, invasive growth and cell migration. May participate incytokinesis. {ECO:0000269|PubMed:11562390,ECO:0000269|PubMed:19799413}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for EVC_CRMP1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for EVC_CRMP1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for EVC_CRMP1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for EVC_CRMP1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | EVC | C0013903 | Ellis-Van Creveld Syndrome | 3 | CTD_human;ORPHANET;UNIPROT |
Hgene | EVC | C0457013 | Weyers acrofacial dysostosis | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | CRMP1 | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | CRMP1 | C3178803 | Social Anhedonia | 1 | PSYGENET |