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Fusion gene ID: 11931 |
FusionGeneSummary for ERBB3_DOCK9 |
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Fusion gene information | Fusion gene name: ERBB3_DOCK9 | Fusion gene ID: 11931 | Hgene | Tgene | Gene symbol | ERBB3 | DOCK9 | Gene ID | 2065 | 23348 |
Gene name | erb-b2 receptor tyrosine kinase 3 | dedicator of cytokinesis 9 | |
Synonyms | ErbB-3|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 | ZIZ1|ZIZIMIN1 | |
Cytomap | 12q13.2 | 13q32.3 | |
Type of gene | protein-coding | protein-coding | |
Description | receptor tyrosine-protein kinase erbB-3human epidermal growth factor receptor 3proto-oncogene-like protein c-ErbB-3tyrosine kinase-type cell surface receptor HER3v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 | dedicator of cytokinesis protein 9cdc42 guanine nucleotide exchange factor zizimin-1zizimin-1 | |
Modification date | 20180527 | 20180522 | |
UniProtAcc | P21860 | Q9BZ29 | |
Ensembl transtripts involved in fusion gene | ENST00000267101, ENST00000450146, ENST00000415288, ENST00000553131, ENST00000411731, ENST00000549832, | ENST00000376460, ENST00000339416, ENST00000448493, ENST00000442173, ENST00000461998, | |
Fusion gene scores | * DoF score | 16 X 15 X 9=2160 | 6 X 9 X 4=216 |
# samples | 16 | 9 | |
** MAII score | log2(16/2160*10)=-3.75488750216347 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/216*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ERBB3 [Title/Abstract] AND DOCK9 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ERBB3 | GO:0007162 | negative regulation of cell adhesion | 7556068 |
Hgene | ERBB3 | GO:0007165 | signal transduction | 10572067 |
Hgene | ERBB3 | GO:0009968 | negative regulation of signal transduction | 11389077 |
Hgene | ERBB3 | GO:0014065 | phosphatidylinositol 3-kinase signaling | 7556068 |
Hgene | ERBB3 | GO:0042127 | regulation of cell proliferation | 11389077 |
Hgene | ERBB3 | GO:0051048 | negative regulation of secretion | 10559227 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BG992869 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000267101 | ENST00000376460 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000267101 | ENST00000339416 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000267101 | ENST00000448493 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000267101 | ENST00000442173 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000267101 | ENST00000461998 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000450146 | ENST00000376460 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000450146 | ENST00000339416 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000450146 | ENST00000448493 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000450146 | ENST00000442173 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000450146 | ENST00000461998 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000415288 | ENST00000376460 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000415288 | ENST00000339416 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000415288 | ENST00000448493 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000415288 | ENST00000442173 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000415288 | ENST00000461998 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000553131 | ENST00000376460 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000553131 | ENST00000339416 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000553131 | ENST00000448493 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000553131 | ENST00000442173 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000553131 | ENST00000461998 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
intron-3CDS | ENST00000411731 | ENST00000376460 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
intron-3CDS | ENST00000411731 | ENST00000339416 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
intron-intron | ENST00000411731 | ENST00000448493 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
intron-intron | ENST00000411731 | ENST00000442173 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
intron-intron | ENST00000411731 | ENST00000461998 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000549832 | ENST00000376460 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
Frame-shift | ENST00000549832 | ENST00000339416 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000549832 | ENST00000448493 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000549832 | ENST00000442173 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
5CDS-intron | ENST00000549832 | ENST00000461998 | ERBB3 | chr12 | 56495582 | - | DOCK9 | chr13 | 99457392 | + |
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FusionProtFeatures for ERBB3_DOCK9 |
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Hgene | Tgene |
ERBB3 | DOCK9 |
Tyrosine-protein kinase that plays an essential role ascell surface receptor for neuregulins. Binds to neuregulin-1(NRG1) and is activated by it; ligand-binding increasesphosphorylation on tyrosine residues and promotes its associationwith the p85 subunit of phosphatidylinositol 3-kinase(PubMed:20682778). May also be activated by CSPG5(PubMed:15358134). {ECO:0000269|PubMed:15358134,ECO:0000269|PubMed:20682778}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ERBB3_DOCK9 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ERBB3_DOCK9 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ERBB3_DOCK9 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ERBB3_DOCK9 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ERBB3 | C0036341 | Schizophrenia | 3 | PSYGENET |
Hgene | ERBB3 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Hgene | ERBB3 | C0011570 | Mental Depression | 1 | PSYGENET |
Hgene | ERBB3 | C0016978 | gallbladder neoplasm | 1 | CTD_human |
Hgene | ERBB3 | C0024121 | Lung Neoplasms | 1 | CTD_human |
Hgene | ERBB3 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | ERBB3 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Hgene | ERBB3 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |
Hgene | ERBB3 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Hgene | ERBB3 | C2931822 | Nasopharyngeal carcinoma | 1 | CTD_human |
Tgene | DOCK9 | C0005586 | Bipolar Disorder | 1 | PSYGENET |