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Fusion gene ID: 11593 |
FusionGeneSummary for ENC1_LRBA |
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Fusion gene information | Fusion gene name: ENC1_LRBA | Fusion gene ID: 11593 | Hgene | Tgene | Gene symbol | ENC1 | LRBA | Gene ID | 8507 | 987 |
Gene name | ectodermal-neural cortex 1 | LPS responsive beige-like anchor protein | |
Synonyms | CCL28|ENC-1|KLHL35|KLHL37|NRPB|PIG10|TP53I10 | BGL|CDC4L|CVID8|LAB300|LBA | |
Cytomap | 5q13.3 | 4q31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | ectoderm-neural cortex protein 1ectodermal-neural cortex 1 (with BTB domain)ectodermal-neural cortex 1 (with BTB-like domain)kelch-like 35kelch-like family member 37kelch-like protein 37nuclear matrix protein NRP/Bnuclear restricted protein, BTB do | lipopolysaccharide-responsive and beige-like anchor proteinCDC4-like proteinLPS-responsive vesicle trafficking, beach and anchor containingvesicle trafficking, beach and anchor containing | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | O14682 | P50851 | |
Ensembl transtripts involved in fusion gene | ENST00000302351, ENST00000510316, ENST00000509284, ENST00000537006, | ENST00000535741, ENST00000510413, ENST00000503716, ENST00000357115, ENST00000507224, | |
Fusion gene scores | * DoF score | 3 X 2 X 1=6 | 15 X 15 X 7=1575 |
# samples | 4 | 18 | |
** MAII score | log2(4/6*10)=2.73696559416621 | log2(18/1575*10)=-3.12928301694497 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ENC1 [Title/Abstract] AND LRBA [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ENC1 | GO:0010499 | proteasomal ubiquitin-independent protein catabolic process | 19424503 |
Hgene | ENC1 | GO:0016567 | protein ubiquitination | 15983046 |
Hgene | ENC1 | GO:0017148 | negative regulation of translation | 19424503 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BC008644 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - | ||
ChiTaRS3.1 | BE873019 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-3CDS | ENST00000302351 | ENST00000535741 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-3CDS | ENST00000302351 | ENST00000510413 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-5UTR | ENST00000302351 | ENST00000503716 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-5UTR | ENST00000302351 | ENST00000357115 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-intron | ENST00000302351 | ENST00000507224 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-3CDS | ENST00000510316 | ENST00000535741 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-3CDS | ENST00000510316 | ENST00000510413 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-5UTR | ENST00000510316 | ENST00000503716 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-5UTR | ENST00000510316 | ENST00000357115 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-intron | ENST00000510316 | ENST00000507224 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
intron-3CDS | ENST00000509284 | ENST00000535741 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
intron-3CDS | ENST00000509284 | ENST00000510413 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
intron-5UTR | ENST00000509284 | ENST00000503716 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
intron-5UTR | ENST00000509284 | ENST00000357115 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
intron-intron | ENST00000509284 | ENST00000507224 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-3CDS | ENST00000537006 | ENST00000535741 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-3CDS | ENST00000537006 | ENST00000510413 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-5UTR | ENST00000537006 | ENST00000503716 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-5UTR | ENST00000537006 | ENST00000357115 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
5UTR-intron | ENST00000537006 | ENST00000507224 | ENC1 | chr5 | 73936130 | - | LRBA | chr4 | 151186964 | - |
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FusionProtFeatures for ENC1_LRBA |
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Hgene | Tgene |
ENC1 | LRBA |
Actin-binding protein involved in the regulation ofneuronal process formation and in differentiation of neural crestcells. Down-regulates transcription factor NF2L2/NRF2 bydecreasing the rate of protein synthesis and not via a ubiquitin-mediated proteasomal degradation mechanism.{ECO:0000269|PubMed:19424503}. | May be involved in coupling signal transduction andvesicle trafficking to enable polarized secretion and/or membranedeposition of immune effector molecules. {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ENC1_LRBA |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ENC1_LRBA |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ENC1 | RB1, CUL3, RBX1, KEAP1, NACC1, NFE2L2, SNCA, HSP90AA1, ACTB, ENC1, SQSTM1, KLHL25, NUDCD3, PLIN5 | LRBA | TUSC2, NOTCH1, FN1, BAG3, CAST, KIF15, DCAF11, INPPL1, MLF2, VCP, MOV10, RIC3, CT55, PARP16, RD3, TMEM52B, MED4, TMEM17, TMEM216, NCR3LG1, PVR, FAM196A, EPHA1, GYPB, DLK2, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ENC1_LRBA |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ENC1_LRBA |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ENC1 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Tgene | LRBA | C3553512 | IMMUNODEFICIENCY, COMMON VARIABLE, 8, WITH AUTOIMMUNITY | 1 | ORPHANET;UNIPROT |