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Fusion gene ID: 11220 |
FusionGeneSummary for EIF2B3_CNTNAP2 |
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Fusion gene information | Fusion gene name: EIF2B3_CNTNAP2 | Fusion gene ID: 11220 | Hgene | Tgene | Gene symbol | EIF2B3 | CNTNAP2 | Gene ID | 8891 | 26047 |
Gene name | eukaryotic translation initiation factor 2B subunit gamma | contactin associated protein like 2 | |
Synonyms | EIF-2B|EIF2Bgamma | AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 | |
Cytomap | 1p34.1 | 7q35-q36.1 | |
Type of gene | protein-coding | protein-coding | |
Description | translation initiation factor eIF-2B subunit gammaeIF-2B GDP-GTP exchange factor subunit gammaeukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa | contactin-associated protein-like 2cell recognition molecule Caspr2homolog of Drosophila neurexin IV | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q9NR50 | Q9UHC6 | |
Ensembl transtripts involved in fusion gene | ENST00000360403, ENST00000372183, ENST00000480675, | ENST00000361727, ENST00000538075, ENST00000463592, | |
Fusion gene scores | * DoF score | 4 X 2 X 4=32 | 8 X 8 X 7=448 |
# samples | 4 | 9 | |
** MAII score | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(9/448*10)=-2.31550182572793 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EIF2B3 [Title/Abstract] AND CNTNAP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | EIF2B3 | GO:0006413 | translational initiation | 10900014|16289705 |
Hgene | EIF2B3 | GO:0050852 | T cell receptor signaling pathway | 8626696 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | OV | TCGA-57-1583-01A | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000360403 | ENST00000361727 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5CDS-intron | ENST00000360403 | ENST00000538075 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5CDS-intron | ENST00000360403 | ENST00000463592 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5CDS-intron | ENST00000372183 | ENST00000361727 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5CDS-intron | ENST00000372183 | ENST00000538075 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5CDS-intron | ENST00000372183 | ENST00000463592 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5UTR-intron | ENST00000480675 | ENST00000361727 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5UTR-intron | ENST00000480675 | ENST00000538075 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
5UTR-intron | ENST00000480675 | ENST00000463592 | EIF2B3 | chr1 | 45392300 | - | CNTNAP2 | chr7 | 147340479 | + |
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FusionProtFeatures for EIF2B3_CNTNAP2 |
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Hgene | Tgene |
EIF2B3 | CNTNAP2 |
Catalyzes the exchange of eukaryotic initiation factor2-bound GDP for GTP. | Required, with CNTNAP1, for radial and longitudinalorganization of myelinated axons. Plays a role in the formation offunctional distinct domains critical for saltatory conduction ofnerve impulses in myelinated nerve fibers. Demarcates thejuxtaparanodal region of the axo-glial junction.{ECO:0000250|UniProtKB:Q9CPW0}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for EIF2B3_CNTNAP2 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for EIF2B3_CNTNAP2 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
EIF2B3 | EIF2B1, STC2, NDUFB8, EIF2B5, EIF2B4, EIF2B2, EGFR, FBXO6, ABCF1, C14orf166, RTCB, NELFB, YBX3, DDX1, DHX9, DIMT1, EDC4, EIF3C, FKBP3, FLII, G3BP1, HNRNPM, HNRNPU, IGF2BP3, ILF2, MRE11A, NMT1, QARS, RFC4, VTI1B, STX12, ECH1, CA14, GPR183, PNKD, P2RX4, OPN3, SPN, PTGER3, SCN2B, PVRL4, HNRNPA1, XPO1, CDC42, ZWINT, GYPB, SYT1, SIGLECL1, EPHA1, TMEM206, UXS1, FZD10, CD70, CD4, HTR2C, SMDT1 | CNTNAP2 | CNTN2, EPB41L3, CASK, CTR9, ZMIZ1, MACF1, IQCB1, MEOX2 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for EIF2B3_CNTNAP2 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for EIF2B3_CNTNAP2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | EIF2B3 | C1858991 | Childhood Ataxia with Central Nervous System Hypomyelinization | 3 | ORPHANET;UNIPROT |
Tgene | CNTNAP2 | C0004352 | Autistic Disorder | 4 | CTD_human |
Tgene | CNTNAP2 | C1510586 | Autism Spectrum Disorders | 4 | CTD_human |
Tgene | CNTNAP2 | C0023014 | Language Development Disorders | 3 | CTD_human |
Tgene | CNTNAP2 | C0014544 | Epilepsy | 2 | CTD_human;HPO |
Tgene | CNTNAP2 | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |
Tgene | CNTNAP2 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | CNTNAP2 | C0036341 | Schizophrenia | 1 | CTD_human |
Tgene | CNTNAP2 | C0038506 | Stuttering | 1 | CTD_human |
Tgene | CNTNAP2 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | CNTNAP2 | C0149925 | Small cell carcinoma of lung | 1 | CTD_human |
Tgene | CNTNAP2 | C0424295 | Hyperactive behavior | 1 | CTD_human;HPO |
Tgene | CNTNAP2 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |
Tgene | CNTNAP2 | C1970431 | PITT-HOPKINS SYNDROME | 1 | CTD_human |