![]() |
||||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Fusion gene ID: 11206 |
FusionGeneSummary for EIF2AK4_AVEN |
![]() |
Fusion gene information | Fusion gene name: EIF2AK4_AVEN | Fusion gene ID: 11206 | Hgene | Tgene | Gene symbol | EIF2AK4 | AVEN | Gene ID | 440275 | 57099 |
Gene name | eukaryotic translation initiation factor 2 alpha kinase 4 | apoptosis and caspase activation inhibitor | |
Synonyms | GCN2|PVOD2 | PDCD12 | |
Cytomap | 15q15.1 | 15q14 | |
Type of gene | protein-coding | protein-coding | |
Description | eIF-2-alpha kinase GCN2GCN2 eIF2alpha kinaseGCN2-like proteingeneral control nonderepressible 2 | cell death regulator Avenapoptosis, caspase activation inhibitorprogrammed cell death 12 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q9P2K8 | Q9NQS1 | |
Ensembl transtripts involved in fusion gene | ENST00000559624, ENST00000382727, ENST00000263791, ENST00000560648, ENST00000559311, | ENST00000306730, ENST00000558136, | |
Fusion gene scores | * DoF score | 10 X 10 X 9=900 | 4 X 2 X 4=32 |
# samples | 11 | 4 | |
** MAII score | log2(11/900*10)=-3.03242147769238 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: EIF2AK4 [Title/Abstract] AND AVEN [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | AVEN | GO:0043066 | negative regulation of apoptotic process | 10949025 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-93-A4JQ-01A | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000559624 | ENST00000306730 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
intron-5UTR | ENST00000559624 | ENST00000558136 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
Frame-shift | ENST00000382727 | ENST00000306730 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
5CDS-5UTR | ENST00000382727 | ENST00000558136 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
Frame-shift | ENST00000263791 | ENST00000306730 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
5CDS-5UTR | ENST00000263791 | ENST00000558136 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
intron-3CDS | ENST00000560648 | ENST00000306730 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
intron-5UTR | ENST00000560648 | ENST00000558136 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
3UTR-3CDS | ENST00000559311 | ENST00000306730 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
3UTR-5UTR | ENST00000559311 | ENST00000558136 | EIF2AK4 | chr15 | 40294989 | + | AVEN | chr15 | 34160056 | - |
Top |
FusionProtFeatures for EIF2AK4_AVEN |
![]() |
Hgene | Tgene |
EIF2AK4 | AVEN |
Protects against apoptosis mediated by Apaf-1. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for EIF2AK4_AVEN |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
Top |
FusionGenePPI for EIF2AK4_AVEN |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
EIF2AK4 | USP46, GGNBP1, ARRB2, TRAP1, FAM153B, PPP1CC, PPP1CA, CROT, TARS, MATR3, LRPPRC, DEF8, TKT, PALM2, PSMC3, MDM4, C6orf141, CRYL1 | AVEN | BCL2L1, BCL2, APAF1, MOV10, NXF1, XPO1, HNRNPU, RPL10 |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for EIF2AK4_AVEN |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for EIF2AK4_AVEN |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | EIF2AK4 | C0002514 | Amino Acid Metabolism, Inborn Errors | 1 | CTD_human |
Hgene | EIF2AK4 | C0018500 | Hair Diseases | 1 | CTD_human |
Hgene | EIF2AK4 | C0020542 | Pulmonary Hypertension | 1 | CTD_human |
Hgene | EIF2AK4 | C0021053 | Immune System Diseases | 1 | CTD_human |
Hgene | EIF2AK4 | C0026848 | Myopathy | 1 | CTD_human |
Hgene | EIF2AK4 | C0034091 | Pulmonary Veno-Occlusive Disease (disorder) | 1 | CTD_human;ORPHANET |
Hgene | EIF2AK4 | C0340848 | PULMONARY VENOOCCLUSIVE DISEASE 2, AUTOSOMAL RECESSIVE | 1 | UNIPROT |
Tgene | AVEN | C0007131 | Non-Small Cell Lung Carcinoma | 1 | CTD_human |