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Fusion gene ID: 10998 |
FusionGeneSummary for EEF2_ERBB3 |
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Fusion gene information | Fusion gene name: EEF2_ERBB3 | Fusion gene ID: 10998 | Hgene | Tgene | Gene symbol | EEF2 | ERBB3 | Gene ID | 1938 | 2065 |
Gene name | eukaryotic translation elongation factor 2 | erb-b2 receptor tyrosine kinase 3 | |
Synonyms | EEF-2|EF-2|EF2|SCA26 | ErbB-3|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 | |
Cytomap | 19p13.3 | 12q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | elongation factor 2polypeptidyl-tRNA translocase | receptor tyrosine-protein kinase erbB-3human epidermal growth factor receptor 3proto-oncogene-like protein c-ErbB-3tyrosine kinase-type cell surface receptor HER3v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 | |
Modification date | 20180523 | 20180527 | |
UniProtAcc | P13639 | P21860 | |
Ensembl transtripts involved in fusion gene | ENST00000309311, ENST00000600720, | ENST00000267101, ENST00000450146, ENST00000415288, ENST00000553131, ENST00000411731, ENST00000549832, | |
Fusion gene scores | * DoF score | 30 X 23 X 17=11730 | 25 X 8 X 14=2800 |
# samples | 50 | 25 | |
** MAII score | log2(50/11730*10)=-4.55213110825378 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(25/2800*10)=-3.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EEF2 [Title/Abstract] AND ERBB3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ERBB3 | GO:0007162 | negative regulation of cell adhesion | 7556068 |
Tgene | ERBB3 | GO:0007165 | signal transduction | 10572067 |
Tgene | ERBB3 | GO:0009968 | negative regulation of signal transduction | 11389077 |
Tgene | ERBB3 | GO:0014065 | phosphatidylinositol 3-kinase signaling | 7556068 |
Tgene | ERBB3 | GO:0042127 | regulation of cell proliferation | 11389077 |
Tgene | ERBB3 | GO:0051048 | negative regulation of secretion | 10559227 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | THCA | TCGA-ET-A3DR-01A | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000309311 | ENST00000267101 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
5CDS-intron | ENST00000309311 | ENST00000450146 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
5CDS-intron | ENST00000309311 | ENST00000415288 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
5CDS-intron | ENST00000309311 | ENST00000553131 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
5CDS-intron | ENST00000309311 | ENST00000411731 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
5CDS-intron | ENST00000309311 | ENST00000549832 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
intron-intron | ENST00000600720 | ENST00000267101 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
intron-intron | ENST00000600720 | ENST00000450146 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
intron-intron | ENST00000600720 | ENST00000415288 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
intron-intron | ENST00000600720 | ENST00000553131 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
intron-intron | ENST00000600720 | ENST00000411731 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
intron-intron | ENST00000600720 | ENST00000549832 | EEF2 | chr19 | 3976055 | - | ERBB3 | chr12 | 56492035 | + |
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FusionProtFeatures for EEF2_ERBB3 |
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Hgene | Tgene |
EEF2 | ERBB3 |
Catalyzes the GTP-dependent ribosomal translocation stepduring translation elongation. During this step, the ribosomechanges from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-boundpeptidyl-tRNA and P-site-bound deacylated tRNA move to the P and Esites, respectively. Catalyzes the coordinated movement of the twotRNA molecules, the mRNA and conformational changes in theribosome. | Tyrosine-protein kinase that plays an essential role ascell surface receptor for neuregulins. Binds to neuregulin-1(NRG1) and is activated by it; ligand-binding increasesphosphorylation on tyrosine residues and promotes its associationwith the p85 subunit of phosphatidylinositol 3-kinase(PubMed:20682778). May also be activated by CSPG5(PubMed:15358134). {ECO:0000269|PubMed:15358134,ECO:0000269|PubMed:20682778}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for EEF2_ERBB3 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for EEF2_ERBB3 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
EEF2 | TP53, MLLT3, POU5F1, UCHL5, PPP2R1A, PPP2R1B, NOP56, DISC1, PSMA3, NDRG1, HDGF, ARRB2, ISG15, FBXO25, EEF2K, CUL3, CUL4B, CUL5, CDK2, CUL1, COPS5, COPS6, CAND1, GRK5, RAD23A, RPL5, RPS6, RPS3A, RPL7, RPS4X, RPL7A, EEF1A1, RPS16, RPS23, RPL31, RPS24, RPL12, RPL4, RPS15A, RPL10A, RPL14, RPL6, RPL18, RPS7, RPL21, RPL11, RPL23, RPS2, RPS5, RPS19, TARS, MRPS5, HSPD1, HSPA8, EIF4A1, PABPC1, FARSA, RPLP0P6, XRCC6, RPL10L, FLOT2, RRM1, HNRNPA0, EPHA2, ERLIN2, RBM4, HNRNPH1, RHOT2, HNRNPDL, HNRNPL, DDX5, ATP6V1H, NUP62, HNRNPA3, UPF1, SMURF1, CCT2, HSP90AA1, HSP90AB1, FN1, VCAM1, ATF2, MLH1, EEF2KMT, UBL4A, ITGA4, NPM1, SMG1, ADRB2, HNRNPD, MAPK14, HIPK4, CDK18, CDK20, TARDBP, CDKN2A, BZW1, CASP7, CKB, CAPN1, FTO, GSR, PGD, TYMP, EIF4H, GINS2, MAT2A, PAK2, PFAS, RPS6KA1, XPO1, YWHAQ, SHFM1, LGR4, HUWE1, FUS, MDM2, RNF2, SIRT6, ARAF, BLK, BUB1B, CASK, CDK13, DAPK1, IRAK1, LIMK2, WEE1, ESR1, HNRNPA1, UNK, EP300, CALR, ABCC3, ABCD3, AHNAK, ARPC2, ATIC, ATP1B3, AURKA, CASP3, CSE1L, DPH1, DPH2, EEF1A2, ENO1, GSPT1, HSD17B10, NDUFV1, NOTCH2, PGK1, TAGLN, TAGLN2, TOMM40, TXN, HCFC1, HSD17B4, IPO4, ISYNA1, OPA1, RDX, TUBB, NTRK1, PTEN, PPME1, GAN, CRY1, CRY2, MCM2, SENP3, U2AF2, NFATC2, CDC73, WWP2, ZNF746, CDH1, FBXO9, DEFA1, SLC25A48, CYLD, DLD, DLST, DNM1L, PARK7, SDHA, SOAT1, SOD1, VDAC1, TRIM25, BRCA1, HDAC6 | ERBB3 | GRB2, PIK3R2, CSK, SHC1, CD82, RGS4, ODF2L, GRB7, PA2G4, EGF, RNF41, NRG1, PIK3R1, IL6ST, PTK6, EGFR, MUC1, NRG2, ERBB2, RPN1, EGR1, ZNF207, HDAC6, LRIG1, MDM2, AKT1, PTPN11, HSP90AA1, NCK2, JAK2, SH2D1A, DAB1, ABL1, HCK, FGFR1, SRC, NCK1, FER, PLCG1, RASA1, TXK, ABL2, ZAP70, SYK, CRK, CRKL, JAK3, VAV2, CHN2, ITK, RIN1, BCAR3, TENC1, TNS3, TNS4, SHC3, PIK3R3, VAV1, VAV3, DAPP1, SH2B3, NEDD4, HLA-DPA1, UQCR10, B3GALTL, PDF, TUBA4A, TUBB8, HLA-A, YBEY, SLC31A1, EIF1AX, SRPK2, HLA-B, SLC25A5, SLC25A6, AIFM1, ANXA2, AP1M2, ATP5A1, B2M, C1QBP, CANX, CDC37, DNAJB11, DNAJA1, TUFM, ERBB3, GFAP, HSPA5, HNRNPH1, HNRNPH2, HNRNPF, HSP90AB1, HSPA8, LGALS3BP, MASP1, PHLDA1, PIK3CA, PIK3CB, PTCD3, RAE1, RPL23, RPS27, RPS27A, RPS27L, MRPS14, MRPS17, MRPS23, MRPS27, MRPS28, S100A10, SSR1, TUBB, ACTA2, ACTB, ACTBL2, POTEKP, ACTC1, ACTG1, ACTG2, ACTA1, HBA1, HBB, HBD, HBE1, HBG1, HBG2, HNRNPH3, HSPA1A, LRPPRC, PON2, POTEE, POTEF, HNRNPA2B1, HNRNPAB, MRPS18B, MRPS22, MRPS25, MRPS26, MRPS34, TUBA1B, PCGF1, DPPA4, NANOG, POU5F1, EPN1, L1CAM, MET, NEDD4L, PTK2B, NDRG1, CDH1, PTPRH, UQCRH, PPM1A, PPM1B, PPM1F, PPM1K, PPM1M, ILKAP, PTPRR, PTPN6, PTPN7, PTPN12, PTPN20B, DUSP14, DUSP18, DUSP19, DUSP21, DUPD1, STYX, PTPDC1, PTEN, TPTE, MTMR1, MTMR2, MTMR6, MTMR8, MTMR9, MTMR10, CDC25C, EYA4, CSPG5, HGS |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for EEF2_ERBB3 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for EEF2_ERBB3 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | EEF2 | C0001418 | Adenocarcinoma | 1 | CTD_human |
Hgene | EEF2 | C0007134 | Renal Cell Carcinoma | 1 | CTD_human |
Hgene | EEF2 | C0024121 | Lung Neoplasms | 1 | CTD_human |
Hgene | EEF2 | C0027626 | Neoplasm Invasiveness | 1 | CTD_human |
Hgene | EEF2 | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
Hgene | EEF2 | C0029408 | Degenerative polyarthritis | 1 | CTD_human |
Hgene | EEF2 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Hgene | EEF2 | C1836395 | SPINOCEREBELLAR ATAXIA 26 | 1 | ORPHANET;UNIPROT |
Tgene | ERBB3 | C0036341 | Schizophrenia | 3 | PSYGENET |
Tgene | ERBB3 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | ERBB3 | C0011570 | Mental Depression | 1 | PSYGENET |
Tgene | ERBB3 | C0016978 | gallbladder neoplasm | 1 | CTD_human |
Tgene | ERBB3 | C0024121 | Lung Neoplasms | 1 | CTD_human |
Tgene | ERBB3 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Tgene | ERBB3 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | ERBB3 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |
Tgene | ERBB3 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Tgene | ERBB3 | C2931822 | Nasopharyngeal carcinoma | 1 | CTD_human |