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Fusion gene ID: 10827 |
FusionGeneSummary for DZANK1_RRBP1 |
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Fusion gene information | Fusion gene name: DZANK1_RRBP1 | Fusion gene ID: 10827 | Hgene | Tgene | Gene symbol | DZANK1 | RRBP1 | Gene ID | 55184 | 6238 |
Gene name | double zinc ribbon and ankyrin repeat domains 1 | ribosome binding protein 1 | |
Synonyms | ANKRD64|C20orf12|C20orf84|bA189K21.1|bA189K21.8|dJ568F9.2 | ES/130|ES130|RRp|hES | |
Cytomap | 20p11.23 | 20p12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | double zinc ribbon and ankyrin repeat-containing protein 1ankyrin repeat domain 64ankyrin repeat-containing protein C20orf12 | ribosome-binding protein 1180 kDa ribosome receptor homologES/130-related proteinribosome binding protein 1 homolog 180kDa (dog)ribosome receptor protein | |
Modification date | 20180522 | 20180519 | |
UniProtAcc | Q9NVP4 | Q9P2E9 | |
Ensembl transtripts involved in fusion gene | ENST00000357236, ENST00000329494, ENST00000262547, ENST00000487128, ENST00000358866, | ENST00000470422, ENST00000246043, ENST00000377813, ENST00000377807, ENST00000360807, ENST00000455029, | |
Fusion gene scores | * DoF score | 2 X 3 X 3=18 | 7 X 9 X 4=252 |
# samples | 3 | 10 | |
** MAII score | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(10/252*10)=-1.33342373372519 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DZANK1 [Title/Abstract] AND RRBP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LGG | TCGA-E1-A7Z2-01A | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000357236 | ENST00000470422 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000357236 | ENST00000246043 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000357236 | ENST00000377813 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000357236 | ENST00000377807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000357236 | ENST00000360807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-5UTR | ENST00000357236 | ENST00000455029 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000329494 | ENST00000470422 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000329494 | ENST00000246043 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000329494 | ENST00000377813 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000329494 | ENST00000377807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000329494 | ENST00000360807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-5UTR | ENST00000329494 | ENST00000455029 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000262547 | ENST00000470422 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000262547 | ENST00000246043 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000262547 | ENST00000377813 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000262547 | ENST00000377807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000262547 | ENST00000360807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-5UTR | ENST00000262547 | ENST00000455029 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5UTR-intron | ENST00000487128 | ENST00000470422 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5UTR-intron | ENST00000487128 | ENST00000246043 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5UTR-intron | ENST00000487128 | ENST00000377813 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5UTR-intron | ENST00000487128 | ENST00000377807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5UTR-intron | ENST00000487128 | ENST00000360807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5UTR-5UTR | ENST00000487128 | ENST00000455029 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000358866 | ENST00000470422 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000358866 | ENST00000246043 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000358866 | ENST00000377813 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000358866 | ENST00000377807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-intron | ENST00000358866 | ENST00000360807 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
5CDS-5UTR | ENST00000358866 | ENST00000455029 | DZANK1 | chr20 | 18393290 | - | RRBP1 | chr20 | 17623772 | - |
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FusionProtFeatures for DZANK1_RRBP1 |
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Hgene | Tgene |
DZANK1 | RRBP1 |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for DZANK1_RRBP1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for DZANK1_RRBP1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DZANK1 | ELAVL1, GFI1B, GLIPR1, DYNLL2, DYNLL1 | RRBP1 | DSTN, ZWINT, CUL3, NDUFA7, CDV3, SCP2, RPS19, ILF3, PPIF, HNRNPM, MRPL53, SRPRB, PIN4, RBMS1, KLF5, RAB8A, CHMP2A, PQBP1, RPL38, HSPA1L, HSBP1, IQCB1, SMAD9, PRKD2, MAP1LC3A, KIAA0101, TARDBP, LGR4, VCP, CUL7, NTRK1, MORC2, RBM8A, BUD31, SMNDC1, EWSR1, TMPO, FOXG1, FOXL1, PES1, EMILIN1, EEF1D, KLHL2, TSPYL6, STYX, DLST, PDHA1, TRIM25, YAP1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for DZANK1_RRBP1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DZANK1_RRBP1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |