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Fusion gene ID: 10708 |
FusionGeneSummary for DUSP22_PTK7 |
Fusion gene summary |
Fusion gene information | Fusion gene name: DUSP22_PTK7 | Fusion gene ID: 10708 | Hgene | Tgene | Gene symbol | DUSP22 | PTK7 | Gene ID | 56940 | 5754 |
Gene name | dual specificity phosphatase 22 | protein tyrosine kinase 7 (inactive) | |
Synonyms | JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX | CCK-4|CCK4 | |
Cytomap | 6p25.3 | 6p21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | dual specificity protein phosphatase 22JNK-stimulating phosphatase 1JNK-stimulatory phosphatase-1MAP kinase phosphatase xhomolog of mouse dual specificity phosphatase LMW-DSP2low molecular weight dual specificity phosphatase 2mitogen-activated prote | inactive tyrosine-protein kinase 7PTK7 protein tyrosine kinase 7colon carcinoma kinase 4pseudo tyrosine kinase receptor 7tyrosine-protein kinase-like 7 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9NRW4 | Q13308 | |
Ensembl transtripts involved in fusion gene | ENST00000344450, ENST00000603453, ENST00000605315, ENST00000419235, ENST00000605035, ENST00000605863, ENST00000603290, ENST00000604971, | ENST00000230419, ENST00000349241, ENST00000345201, ENST00000352931, ENST00000481273, ENST00000476760, ENST00000471863, | |
Fusion gene scores | * DoF score | 4 X 2 X 4=32 | 5 X 5 X 3=75 |
# samples | 4 | 6 | |
** MAII score | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(6/75*10)=-0.321928094887362 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DUSP22 [Title/Abstract] AND PTK7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Kinase involved fusion gene, inframe and retained kinase domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-EJ-A65E-01A | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000344450 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000344450 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000344450 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000344450 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000344450 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000344450 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000344450 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
Frame-shift | ENST00000603453 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000603453 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000603453 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000603453 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000603453 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000603453 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000603453 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
In-frame | ENST00000605315 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000605315 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000605315 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000605315 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000605315 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000605315 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000605315 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
Frame-shift | ENST00000419235 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000419235 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000419235 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000419235 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000419235 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000419235 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000419235 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-3CDS | ENST00000605035 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-intron | ENST00000605035 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-intron | ENST00000605035 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-intron | ENST00000605035 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-intron | ENST00000605035 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-intron | ENST00000605035 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
3UTR-intron | ENST00000605035 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-3CDS | ENST00000605863 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000605863 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000605863 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000605863 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000605863 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000605863 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000605863 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-3CDS | ENST00000603290 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000603290 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000603290 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000603290 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000603290 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000603290 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
intron-intron | ENST00000603290 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
Frame-shift | ENST00000604971 | ENST00000230419 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000604971 | ENST00000349241 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000604971 | ENST00000345201 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000604971 | ENST00000352931 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000604971 | ENST00000481273 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000604971 | ENST00000476760 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
5CDS-intron | ENST00000604971 | ENST00000471863 | DUSP22 | chr6 | 348841 | + | PTK7 | chr6 | 43106587 | + |
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FusionProtFeatures for DUSP22_PTK7 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DUSP22 | PTK7 |
Activates the Jnk signaling pathway. Dephosphorylatesand deactivates p38 and stress-activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK) (By similarity). {ECO:0000250,ECO:0000269|PubMed:11717427}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DUSP22 | chr6:348841 | chr6:43106587 | ENST00000344450 | + | 7 | 8 | 65_133 | 169 | 185 | Domain | Note=Tyrosine-protein phosphatase |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 412_497 | 409 | 1071 | Domain | Note=Ig-like C2-type 5 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 503_586 | 409 | 1071 | Domain | Note=Ig-like C2-type 6 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 578_680 | 409 | 1071 | Domain | Note=Ig-like C2-type 7 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 796_1066 | 409 | 1071 | Domain | Protein kinase%3B inactive |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 412_497 | 409 | 1031 | Domain | Note=Ig-like C2-type 5 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 503_586 | 409 | 1031 | Domain | Note=Ig-like C2-type 6 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 578_680 | 409 | 1031 | Domain | Note=Ig-like C2-type 7 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 796_1066 | 409 | 1031 | Domain | Protein kinase%3B inactive |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 128_218 | -49 | 941 | Domain | Note=Ig-like C2-type 2 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 225_317 | -49 | 941 | Domain | Note=Ig-like C2-type 3 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 309_407 | -49 | 941 | Domain | Note=Ig-like C2-type 4 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 31_120 | -49 | 941 | Domain | Note=Ig-like C2-type 1 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 412_497 | -49 | 941 | Domain | Note=Ig-like C2-type 5 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 503_586 | -49 | 941 | Domain | Note=Ig-like C2-type 6 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 578_680 | -49 | 941 | Domain | Note=Ig-like C2-type 7 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 796_1066 | -49 | 941 | Domain | Protein kinase%3B inactive |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 412_497 | 409 | 1015 | Domain | Note=Ig-like C2-type 5 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 503_586 | 409 | 1015 | Domain | Note=Ig-like C2-type 6 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 578_680 | 409 | 1015 | Domain | Note=Ig-like C2-type 7 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 796_1066 | 409 | 1015 | Domain | Protein kinase%3B inactive |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 503_586 | 417 | 1079 | Domain | Note=Ig-like C2-type 6 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 578_680 | 417 | 1079 | Domain | Note=Ig-like C2-type 7 |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 796_1066 | 417 | 1079 | Domain | Protein kinase%3B inactive |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 726_1070 | 409 | 1071 | Topological domain | Cytoplasmic |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 726_1070 | 409 | 1031 | Topological domain | Cytoplasmic |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 31_704 | -49 | 941 | Topological domain | Extracellular |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 726_1070 | -49 | 941 | Topological domain | Cytoplasmic |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 726_1070 | 409 | 1015 | Topological domain | Cytoplasmic |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 726_1070 | 417 | 1079 | Topological domain | Cytoplasmic |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 705_725 | 409 | 1071 | Transmembrane | Helical |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 705_725 | 409 | 1031 | Transmembrane | Helical |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 705_725 | -49 | 941 | Transmembrane | Helical |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 705_725 | 409 | 1015 | Transmembrane | Helical |
Tgene | >PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 705_725 | 417 | 1079 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >DUSP22 | chr6:348841 | chr6:43106587 | ENST00000419235 | + | 1 | 7 | 65_133 | -26 | 206 | Domain | Note=Tyrosine-protein phosphatase |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 128_218 | 409 | 1071 | Domain | Note=Ig-like C2-type 2 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 225_317 | 409 | 1071 | Domain | Note=Ig-like C2-type 3 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 309_407 | 409 | 1071 | Domain | Note=Ig-like C2-type 4 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 31_120 | 409 | 1071 | Domain | Note=Ig-like C2-type 1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 128_218 | 409 | 1031 | Domain | Note=Ig-like C2-type 2 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 225_317 | 409 | 1031 | Domain | Note=Ig-like C2-type 3 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 309_407 | 409 | 1031 | Domain | Note=Ig-like C2-type 4 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 31_120 | 409 | 1031 | Domain | Note=Ig-like C2-type 1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 128_218 | 409 | 1015 | Domain | Note=Ig-like C2-type 2 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 225_317 | 409 | 1015 | Domain | Note=Ig-like C2-type 3 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 309_407 | 409 | 1015 | Domain | Note=Ig-like C2-type 4 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 31_120 | 409 | 1015 | Domain | Note=Ig-like C2-type 1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 128_218 | 417 | 1079 | Domain | Note=Ig-like C2-type 2 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 225_317 | 417 | 1079 | Domain | Note=Ig-like C2-type 3 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 309_407 | 417 | 1079 | Domain | Note=Ig-like C2-type 4 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 31_120 | 417 | 1079 | Domain | Note=Ig-like C2-type 1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 412_497 | 417 | 1079 | Domain | Note=Ig-like C2-type 5 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 31_704 | 409 | 1071 | Topological domain | Extracellular |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 31_704 | 409 | 1031 | Topological domain | Extracellular |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 31_704 | 409 | 1015 | Topological domain | Extracellular |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 31_704 | 417 | 1079 | Topological domain | Extracellular |
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FusionGeneSequence for DUSP22_PTK7 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_DUSP22_ENST00000344450_chr6_348841_+_PTK7_ENST00000230419_chr6_43106587_+_831aa MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLA GVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAVPSWLKKPQD SQLEEGKPGYLDCLTQATPKPTVVWYRNQMLISEDSRFEVFKNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVLEKLKFTPPPQP QQCMEFDKEATVPCSATGREKPTIKWERADGSSLPEWVTDNAGTLHFARVTRDDAGNYTCIASNGPQGQIRAHVQLTVAVFITFKVEPER TTVYQGHTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTCIAGNSCNIKHTEAPLYVVDKPVPEES EGPGSPPPYKMIQTIGLSVGAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEMECLNGGPLQNGQPSAEIQEEVALTSLGSGPAATN KRHSTSDKMHFPRSSLQPITTLGKSEFGEVFLAKAQGLEEGVAETLVLVKSLQSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREAEP HYMVLEYVDLGDLKQFLRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEY YHFRQAWVPLRWMSPEAILEGDFSTKSDVWAFGVLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWALSPKD >In-frame_DUSP22_ENST00000605315_chr6_348841_+_PTK7_ENST00000230419_chr6_43106587_+_815aa MTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILGKYKEQGRTEPQPGARRWSSFPAL APLTYDNYTTETXRKRPAAFLPTACLQCARLGRGAVVVADEDRKGRXPGRGGARAPSPKQHRPAVPSWLKKPQDSQLEEGKPGYLDCLTQ ATPKPTVVWYRNQMLISEDSRFEVFKNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVLEKLKFTPPPQPQQCMEFDKEATVPCSA TGREKPTIKWERADGSSLPEWVTDNAGTLHFARVTRDDAGNYTCIASNGPQGQIRAHVQLTVAVFITFKVEPERTTVYQGHTALLQCEAQ GDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTCIAGNSCNIKHTEAPLYVVDKPVPEESEGPGSPPPYKMIQTIG LSVGAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEMECLNGGPLQNGQPSAEIQEEVALTSLGSGPAATNKRHSTSDKMHFPRSSL QPITTLGKSEFGEVFLAKAQGLEEGVAETLVLVKSLQSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREAEPHYMVLEYVDLGDLKQF LRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPE AILEGDFSTKSDVWAFGVLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWALSPKDRPSFSEIASALGDSTV |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_DUSP22_ENST00000344450_chr6_348841_+_PTK7_ENST00000230419_chr6_43106587_+_2493nt ATGGGGAATGGGATGAACAAGATCCTGCCCGGCCTGTACATCGGCAACTTCAAAGATGCCAGAGACGCGGAACAATTGAGCAAGAACAAG GTGACACATATTCTGTCTGTCCACGATAGTGCCAGGCCTATGTTGGAGGGAGTTAAATACCTGTGCATCCCAGCAGCGGATTCACCATCT CAAAACCTGACAAGACATTTCAAAGAAAGTATTAAATTCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGTACACTGCCTGGCC GGGGTCTCCAGGAGCGTGACACTGGTGATCGCATACATCATGACCGTCACTGACTTTGGCTGGGAGGATGCCCTGCACACCGTGCGTGCT GGGAGATCCTGTGCCAACCCCAACGTGGGCTTCCAGAGACAGCTCCAGGAGTTTGAGAAGCATGAGGTCCATCAGTATCGGCAGTGGCTG AAGGAAGAATATGGAGAGAGCCCTTTGCAGGATGCAGAAGAAGCCAAAAACATTCTGGCTGTGCCCTCCTGGCTGAAGAAGCCCCAAGAC AGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGGATTGCCTGACCCAGGCCACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATG CTCATCTCAGAGGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGGGACATGGTACCGT TGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCA CAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCACAGGCCGAGAGAAGCCCACTATTAAGTGGGAACGGGCAGAT GGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGC ATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGTTTTTATCACCTTCAAAGTGGAACCAGAGCGT ACGACTGTGTACCAGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGC ATCCTGGACCCCACCAAGCTGGGACCCAGGATGCACATCTTCCAGAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGAGGACTCAGGC CGCTACACCTGCATTGCAGGCAACAGCTGCAACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGACAAGCCTGTGCCGGAGGAGTCG GAGGGCCCTGGCAGCCCTCCCCCCTACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTG GGCCTCATGTTCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAAC GGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAAC AAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTG TTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAG CTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCTGGGGCTGTGCCGGGAGGCTGAGCCC CACTACATGGTGCTGGAATATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGAAGTCACAG CCCCTCAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGAC TTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTGTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAGTGAGTAC TACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGG GCCTTCGGTGTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAG GCTGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGCTGGGCCCTCAGCCCCAAGGAC >In-frame_DUSP22_ENST00000605315_chr6_348841_+_PTK7_ENST00000230419_chr6_43106587_+_2445nt ATGACCGTCACTGACTTTGGCTGGGAGGATGCCCTGCACACCGTGCGTGCTGGGAGATCCTGTGCCAACCCCAACGTGGGCTTCCAGAGA CAGCTCCAGGAGTTTGAGAAGCATGAGGTCCATCAGTATCGGCAGTGGCTGAAGGAAGAATATGGAGAGAGCCCTTTGCAGGATGCAGAA GAAGCCAAAAACATTCTGGGTAAATATAAGGAGCAAGGGCGCACAGAGCCCCAGCCCGGCGCCAGGCGGTGGAGCAGTTTTCCGGCACTG GCTCCGCTGACCTACGATAATTATACGACGGAGACCTAACGCAAGCGACCTGCTGCCTTCCTTCCCACTGCTTGTCTTCAGTGTGCCCGG CTGGGCAGGGGTGCGGTGGTGGTGGCCGATGAGGACAGGAAAGGGAGATAGCCAGGGCGAGGTGGGGCGAGGGCTCCTTCCCCCAAGCAA CACCGCCCAGCTGTGCCCTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGGATTGCCTGACCCAG GCCACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGAGGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTG CGCATCAACAGCGTGGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTC CAAGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCC ACAGGCCGAGAGAAGCCCACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCAT TTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGTCCAGCTC ACTGTGGCAGTTTTTATCACCTTCAAAGTGGAACCAGAGCGTACGACTGTGTACCAGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAG GGGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGATGCACATCTTCCAGAAT GGCTCCCTGGTGATCCATGACGTGGCCCCTGAGGACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCTGCAACATCAAGCACACGGAG GCCCCCCTCTATGTCGTGGACAAGCCTGTGCCGGAGGAGTCGGAGGGCCCTGGCAGCCCTCCCCCCTACAAGATGATCCAGACCATTGGG TTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAG AAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAA GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTG CAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAGAGACCCTG GTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCC AACGTGGTGCGGCTCCTGGGGCTGTGCCGGGAGGCTGAGCCCCACTACATGGTGCTGGAATATGTGGATCTGGGAGACCTCAAGCAGTTC CTGAGGATTTCCAAGAGCAAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTG GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTG TCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAG GCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCC CATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTC TATCGGCTGATGCAGCGCTGCTGGGCCCTCAGCCCCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGTG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_DUSP22_ENST00000344450_chr6_348841_+_PTK7_ENST00000230419_chr6_43106587_+_3774nt GAGCCCGAGCCTAGTGCCTCCCACGCCCGGCGGCCGCGAGCCGGGGTCCGCGAGGGCGGAGTGGGGCGCGGCAGCCAGGAACCCGACTAC GAATCCCAGGGTGCGGGCGGGCGGAGCGAGGAGGGACGCTGGGCCTGCCCGGTGCGCACGGGGGCGGGGACCGGCAAGGCGGGACCATTT CCCGGCATAGGCTCCGGTGCCCCTGCCCGGCTCCCGCCGGGAAGTTCTAGGCCGCCGCACAGAAAGCCCTGCCCTCCACGCCGGGTCTCT GGAGCGCCCTGGGTTGCCCGGCCGGTCCCTGCCGCTGACTTGTTGACACTGCGAGCACTCAGTCCCTCCCGCGCGCCTCCTCCCCGCCCG CCCCGCCGCTCCTCCTCCCTGTAACATGCCATAGTGCGCCTGCGACCACACGGCCGGGGCGCTAGCGTTCGCCTTCAGCCACCATGGGGA ATGGGATGAACAAGATCCTGCCCGGCCTGTACATCGGCAACTTCAAAGATGCCAGAGACGCGGAACAATTGAGCAAGAACAAGGTGACAC ATATTCTGTCTGTCCACGATAGTGCCAGGCCTATGTTGGAGGGAGTTAAATACCTGTGCATCCCAGCAGCGGATTCACCATCTCAAAACC TGACAAGACATTTCAAAGAAAGTATTAAATTCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGTACACTGCCTGGCCGGGGTCT CCAGGAGCGTGACACTGGTGATCGCATACATCATGACCGTCACTGACTTTGGCTGGGAGGATGCCCTGCACACCGTGCGTGCTGGGAGAT CCTGTGCCAACCCCAACGTGGGCTTCCAGAGACAGCTCCAGGAGTTTGAGAAGCATGAGGTCCATCAGTATCGGCAGTGGCTGAAGGAAG AATATGGAGAGAGCCCTTTGCAGGATGCAGAAGAAGCCAAAAACATTCTGGCTGTGCCCTCCTGGCTGAAGAAGCCCCAAGACAGCCAGC TGGAGGAGGGCAAACCCGGCTACTTGGATTGCCTGACCCAGGCCACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTCATCT CAGAGGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGGGACATGGTACCGTTGTATGA GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGT GCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCACAGGCCGAGAGAAGCCCACTATTAAGTGGGAACGGGCAGATGGGAGCA GCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTGCCT CCAACGGGCCGCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGTTTTTATCACCTTCAAAGTGGAACCAGAGCGTACGACTG TGTACCAGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCCAGAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGAGGACTCAGGCCGCTACA CCTGCATTGCAGGCAACAGCTGCAACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGACAAGCCTGTGCCGGAGGAGTCGGAGGGCC CTGGCAGCCCTCCCCCCTACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCCTCA TGTTCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGC CTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCC ACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGG CAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTGGACT TCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCTGGGGCTGTGCCGGGAGGCTGAGCCCCACTACA TGGTGCTGGAATATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGAAGTCACAGCCCCTCA GCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTG CGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTGTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAGTGAGTACTACCACT TCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCG GTGTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGA AGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGCTGGGCCCTCAGCCCCAAGGACCGGCCCT CCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGG AGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATT GCTGAGGTCTGAGCAGGGCCTGGCCTTTCCTCCTCTTCCTCACCCTCATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGG CTTTGAGCTGGGCAGTTTTCCCTGCCACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTT CTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTT CCTTAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGG ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCACCCTTCTCTCCTTTCCTCATCCTAA GTGCCTGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATATGTAAT TGCAGCGTGGGGTGGGTGGGCATGGGAGGTAGGGGTGGGCCCTGGAGATGAGGAGGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT >In-frame_DUSP22_ENST00000605315_chr6_348841_+_PTK7_ENST00000230419_chr6_43106587_+_3868nt GAGCCCGAGCCTAGTGCCTCCCACGCCCGGCGGCCGCGAGCCGGGGTCCGCGAGGGCGGAGTGGGGCGCGGCAGCCAGGAACCCGACTAC GAATCCCAGGGTGCGGGCGGGCGGAGCGAGGAGGGACGCTGGGCCTGCCCGGTGCGCACGGGGGCGGGGACCGGCAAGGCGGGACCATTT CCCGGCATAGGCTCCGGTGCCCCTGCCCGGCTCCCGCCGGGAAGTTCTAGGCCGCCGCACAGAAAGCCCTGCCCTCCACGCCGGGTCTCT GGAGCGCCCTGGGTTGCCCGGCCGGTCCCTGCCGCTGACTTGTTGACACTGCGAGCACTCAGTCCCTCCCGCGCGCCTCCTCCCCGCCCG CCCCGCCGCTCCTCCTCCCTGTAACATGCCATAGTGCGCCTGCGACCACACGGCCGGGGCGCTAGCGTTCGCCTTCAGCCACCATGGGGA ATGGGATGAACAAGGACAAGACATTTCAAAGAAAGTATTAAATTCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGTACACTGC CTGGCCGGGGTCTCCAGGAGCGTGACACTGGTGATCGCATACATCATGACCGTCACTGACTTTGGCTGGGAGGATGCCCTGCACACCGTG CGTGCTGGGAGATCCTGTGCCAACCCCAACGTGGGCTTCCAGAGACAGCTCCAGGAGTTTGAGAAGCATGAGGTCCATCAGTATCGGCAG TGGCTGAAGGAAGAATATGGAGAGAGCCCTTTGCAGGATGCAGAAGAAGCCAAAAACATTCTGGGTAAATATAAGGAGCAAGGGCGCACA GAGCCCCAGCCCGGCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTGACCTACGATAATTATACGACGGAGACCTAACGCAAG CGACCTGCTGCCTTCCTTCCCACTGCTTGTCTTCAGTGTGCCCGGCTGGGCAGGGGTGCGGTGGTGGTGGCCGATGAGGACAGGAAAGGG AGATAGCCAGGGCGAGGTGGGGCGAGGGCTCCTTCCCCCAAGCAACACCGCCCAGCTGTGCCCTCCTGGCTGAAGAAGCCCCAAGACAGC CAGCTGGAGGAGGGCAAACCCGGCTACTTGGATTGCCTGACCCAGGCCACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTC ATCTCAGAGGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGGGACATGGTACCGTTGT ATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAG CAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCACAGGCCGAGAGAAGCCCACTATTAAGTGGGAACGGGCAGATGGG AGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATT GCCTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGTTTTTATCACCTTCAAAGTGGAACCAGAGCGTACG ACTGTGTACCAGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATC CTGGACCCCACCAAGCTGGGACCCAGGATGCACATCTTCCAGAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGAGGACTCAGGCCGC TACACCTGCATTGCAGGCAACAGCTGCAACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGACAAGCCTGTGCCGGAGGAGTCGGAG GGCCCTGGCAGCCCTCCCCCCTACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGC CTCATGTTCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGT GGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAA CGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTC CTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTG GACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCTGGGGCTGTGCCGGGAGGCTGAGCCCCAC TACATGGTGCTGGAATATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGAAGTCACAGCCC CTCAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTG GCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTGTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAGTGAGTACTAC CACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCC TTCGGTGTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCT GGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGCTGGGCCCTCAGCCCCAAGGACCGG CCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCA GGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGG CATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCCTCCTCTTCCTCACCCTCATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACT AGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCA ACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGG AGTTCCTTAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATA GAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCACCCTTCTCTCCTTTCCTCATC CTAAGTGCCTGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATATG TAATTGCAGCGTGGGGTGGGTGGGCATGGGAGGTAGGGGTGGGCCCTGGAGATGAGGAGGGTGGGCCATCCTTACCCCACACTTTTATTG |
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FusionGenePPI for DUSP22_PTK7 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DUSP22 | HOXA1, HSD17B4, RPL27A, DUSP22, ARF5, TAGLN2, DUSP23, VTI1B, SVIP, PGRMC1, PGRMC2, RAB14, DUSP28, TMEM11, HMOX2, NME1, MFF, KRAS, TMX1, PRAF2, MOSPD1, SRPR, RAB5C, PTRH2, RAB5A, APRT, HRAS, MCL1, APOL2, ATXN10, GNAI3, SAMM50, SNAP23, SYNGR1, GNAI1, ERGIC1, GNAI2, MTCH1, DCAKD, RAB10, RAB9A, STX16, TLDC1, WDR18, NME3, CYB5B, FAM177A1, TIMM17B, TMCO1, PCYOX1, RAP1A, NME2P1, TMEM70, CHP1, TIMM17A, MTCH2, QKI, ARF1, CHCHD3, ARF4, TMX3, ARL1, SCAMP3, TOMM40, PPM1A, CANT1, TMUB1, IGKC, DIABLO, GNA14, NRN1, CCNYL1, LARS2, GNAQ, HPCAL1, ERICH5, C12orf75, PTPRG, POTEF, KCTD21, ARFIP2, UBTD2, FBXO7, INPP5A, LAMTOR1, ULBP3, ULBP2, PAG1, IKBIP, EIF4E2, CTNNA2, SRP54, GNA11, SPECC1L, GNG5, YES1, VAMP3, GNA13, CSNK1G3, LAMTOR4, PALM, CUEDC1, GNAO1 | PTK7 | RYK, TSHR, CEACAM21, ATP1B4, BTNL8, NTRK1, PPM1G, CLNK, TMEM17, PPP3CA, PPP3CB, PPM1A, PPM1B, PPM1F, PPM1K, ILKAP, CTDSP2, PTPRR, PTPN6, PTPN7, PTPN11, PTPN12, DUSP10, DUSP14, DUSP15, DUSP18, DUSP19, DUSP21, DUSP26, DUPD1, STYX, CDC14A, PTEN, TPTE, TPTE2, MTMR1, MTMR6, MTMR9, MTMR10 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000230419 | + | 6 | 20 | 794_1070 | 409 | 1071 | CTNNB1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000345201 | + | 6 | 19 | 794_1070 | 409 | 1031 | CTNNB1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000349241 | + | 0 | 17 | 794_1070 | -49 | 941 | CTNNB1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000352931 | + | 6 | 19 | 794_1070 | 409 | 1015 | CTNNB1 |
Tgene | PTK7 | chr6:348841 | chr6:43106587 | ENST00000481273 | + | 6 | 20 | 794_1070 | 417 | 1079 | CTNNB1 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for DUSP22_PTK7 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DUSP22_PTK7 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |