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Fusion gene ID: 10638 |
FusionGeneSummary for DTD1_POU2F3 |
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Fusion gene information | Fusion gene name: DTD1_POU2F3 | Fusion gene ID: 10638 | Hgene | Tgene | Gene symbol | DTD1 | POU2F3 | Gene ID | 92675 | 25833 |
Gene name | D-tyrosyl-tRNA deacylase 1 | POU class 2 homeobox 3 | |
Synonyms | C20orf88|DTD|DUE-B|DUEB|HARS2|pqn-68 | Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a | |
Cytomap | 20p11.23 | 11q23.3 | |
Type of gene | protein-coding | protein-coding | |
Description | D-aminoacyl-tRNA deacylase 1D-tyrosyl-tRNA deacylase 1 homologD-tyrosyl-tRNA(Tyr) deacylase 1DNA-unwinding element-binding protein Bgly-tRNA(Ala) deacylasehistidyl-tRNA synthase-relatedhistidyl-tRNA synthetase 2 | POU domain, class 2, transcription factor 3POU domain transcription factor OCT11aoctamer-binding protein 11octamer-binding transcription factor 11transcription factor PLA-1transcription factor Skn-1 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q8TEA8 | Q9UKI9 | |
Ensembl transtripts involved in fusion gene | ENST00000377452, ENST00000494921, | ENST00000260264, ENST00000543440, | |
Fusion gene scores | * DoF score | 8 X 5 X 6=240 | 3 X 2 X 3=18 |
# samples | 8 | 4 | |
** MAII score | log2(8/240*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/18*10)=1.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: DTD1 [Title/Abstract] AND POU2F3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | POU2F3 | GO:0043922 | negative regulation by host of viral transcription | 14645924 |
Tgene | POU2F3 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 12624109 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUAD | TCGA-38-4632-01A | DTD1 | chr20 | 18608877 | + | POU2F3 | chr11 | 120186070 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000377452 | ENST00000260264 | DTD1 | chr20 | 18608877 | + | POU2F3 | chr11 | 120186070 | + |
In-frame | ENST00000377452 | ENST00000543440 | DTD1 | chr20 | 18608877 | + | POU2F3 | chr11 | 120186070 | + |
3UTR-3CDS | ENST00000494921 | ENST00000260264 | DTD1 | chr20 | 18608877 | + | POU2F3 | chr11 | 120186070 | + |
3UTR-3CDS | ENST00000494921 | ENST00000543440 | DTD1 | chr20 | 18608877 | + | POU2F3 | chr11 | 120186070 | + |
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FusionProtFeatures for DTD1_POU2F3 |
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Hgene | Tgene |
DTD1 | POU2F3 |
Transcription factor that binds to the octamer motif(5'-ATTTGCAT-3'). Regulated the expression of a number of genessuch as SPRR2A or placental lactogen. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DTD1 | chr20:18608877 | chr11:120186070 | ENST00000377452 | + | 4 | 6 | 139_140 | 159 | 321 | Motif | Gly-cisPro motif%2C important for rejection of L-amino acids |
Tgene | >POU2F3 | chr20:18608877 | chr11:120186070 | ENST00000543440 | + | 9 | 13 | 354_425 | 356 | 437 | Compositional bias | Note=Ser-rich |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | POU2F3 | chr20:18608877 | chr11:120186070 | ENST00000260264 | + | 9 | 13 | 354_425 | 358 | 439 | Compositional bias | Note=Ser-rich |
Tgene | POU2F3 | chr20:18608877 | chr11:120186070 | ENST00000260264 | + | 9 | 13 | 281_340 | 358 | 439 | DNA binding | Homeobox |
Tgene | POU2F3 | chr20:18608877 | chr11:120186070 | ENST00000543440 | + | 9 | 13 | 281_340 | 356 | 437 | DNA binding | Homeobox |
Tgene | POU2F3 | chr20:18608877 | chr11:120186070 | ENST00000260264 | + | 9 | 13 | 183_257 | 358 | 439 | Domain | POU-specific |
Tgene | POU2F3 | chr20:18608877 | chr11:120186070 | ENST00000543440 | + | 9 | 13 | 183_257 | 356 | 437 | Domain | POU-specific |
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FusionGeneSequence for DTD1_POU2F3 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_DTD1_ENST00000377452_chr20_18608877_+_POU2F3_ENST00000260264_chr11_120186070_+_240aa MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCVLKGNK PDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESPAPGTATSDPKQVSPSGSLGPLSVPPVHSTMPG >In-frame_DTD1_ENST00000377452_chr20_18608877_+_POU2F3_ENST00000543440_chr11_120186070_+_240aa MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCVLKGNK PDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESPAPGTATSDPKQVSPSGSLGPLSVPPVHSTMPG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_DTD1_ENST00000377452_chr20_18608877_+_POU2F3_ENST00000260264_chr11_120186070_+_720nt ATGAAGGCCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATTAGTGCCATTGGAAGGGGCATATGTGTGTTG CTGGGTATTTCCCTGGAGGATACGCAGAAGGAACTGGAACACATGGTCCGAAAGATTCTAAACCTGCGTGTATTTGAGGATGAGAGTGGG AAGCACTGGTCGAAGAGTGTGATGGACAAACAGTACGAGATTCTGTGTGTCAGCCAGTTTACCCTCCAGTGTGTCCTGAAGGGAAACAAG CCTGATTTCCACCTAGCAATGCCCACGGAGCAGGCAGAGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAAACATACAGGCCGGAG CTTATCAAAGATGGCAAGTTTGGGGCCTACATGCAGGTGCACATTCAGAATGATGGGCCTGTGACCATAGAGCTGGAATCGCCAGCTCCC GGCACTGCTACCTCTGACCCAAAGCAGGTATCTCCCTCAGGGTCTCTGGGCCCCCTCTCTGTCCCTCCTGTCCACAGTACCATGCCTGGA ACAGTAACGTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAA AATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGATGGAATCATTCCACCTACCTCCACTGA >In-frame_DTD1_ENST00000377452_chr20_18608877_+_POU2F3_ENST00000543440_chr11_120186070_+_720nt ATGAAGGCCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATTAGTGCCATTGGAAGGGGCATATGTGTGTTG CTGGGTATTTCCCTGGAGGATACGCAGAAGGAACTGGAACACATGGTCCGAAAGATTCTAAACCTGCGTGTATTTGAGGATGAGAGTGGG AAGCACTGGTCGAAGAGTGTGATGGACAAACAGTACGAGATTCTGTGTGTCAGCCAGTTTACCCTCCAGTGTGTCCTGAAGGGAAACAAG CCTGATTTCCACCTAGCAATGCCCACGGAGCAGGCAGAGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAAACATACAGGCCGGAG CTTATCAAAGATGGCAAGTTTGGGGCCTACATGCAGGTGCACATTCAGAATGATGGGCCTGTGACCATAGAGCTGGAATCGCCAGCTCCC GGCACTGCTACCTCTGACCCAAAGCAGGTATCTCCCTCAGGGTCTCTGGGCCCCCTCTCTGTCCCTCCTGTCCACAGTACCATGCCTGGA ACAGTAACGTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAA AATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGATGGAATCATTCCACCTACCTCCACTGA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_DTD1_ENST00000377452_chr20_18608877_+_POU2F3_ENST00000260264_chr11_120186070_+_2452nt CTATCGCCAGGCCGAGAGTGGGCGTGGCCGACGTGGGGTGGGTAGCAGCCGACCGAGTCGGACCGGCCAGTTGGGCGCGCTTCCGGGTGT CACCTCCAGAGGGCGCCGGCTGCGGAGCCGCCCTCAGAGTCGCGAGGCCGGACGCAGCGCGGCGCCGCCCCACTCGCCCCAGCCGCCGCC ATGAAGGCCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATTAGTGCCATTGGAAGGGGCATATGTGTGTTG CTGGGTATTTCCCTGGAGGATACGCAGAAGGAACTGGAACACATGGTCCGAAAGATTCTAAACCTGCGTGTATTTGAGGATGAGAGTGGG AAGCACTGGTCGAAGAGTGTGATGGACAAACAGTACGAGATTCTGTGTGTCAGCCAGTTTACCCTCCAGTGTGTCCTGAAGGGAAACAAG CCTGATTTCCACCTAGCAATGCCCACGGAGCAGGCAGAGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAAACATACAGGCCGGAG CTTATCAAAGATGGCAAGTTTGGGGCCTACATGCAGGTGCACATTCAGAATGATGGGCCTGTGACCATAGAGCTGGAATCGCCAGCTCCC GGCACTGCTACCTCTGACCCAAAGCAGGTATCTCCCTCAGGGTCTCTGGGCCCCCTCTCTGTCCCTCCTGTCCACAGTACCATGCCTGGA ACAGTAACGTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAA AATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGATGGAATCATTCCACCTACCTCCACTGA GACCAAAAAGTTTCTCCTACTCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTTCA GAAGAGTGGAAGAAAATCTCCACTATCAATGAACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGA ACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCCCTCCTAGGAGCTTACCATTTTCACCTTCCTTGCCTATGCCCTTGCCTTCT AGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCTTTCAGAGAAAAGACTTCTTGCTGTTATTCTCCAACTCATCCGTGGGCTT CTGGGGACAGCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATC CCAAAATCTGTGAAAAGATTTGAATCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGATGGAATCTTCAT CTCACCCCATTTTCTTTTTAACCTCGCCCCCTTTTCTACAATCAAATCCATTCATTATTGCGCCCTCCAGGTCCCCTCCTTTTTGCAGAA GGTGTAAAAGAGCTGCCCTTGGTGGGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCCCTTCTGTCTGTCCACGTCTGCCTAGGGCTCA GGAGTGCTTGTTCTTTCCCTTCCTCCCTGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAGAACACAAGA GCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTCCCATTTTTTGCATTATGTTCTTAACTCCTTAATGTGGAATT TTCCAGCAAAATGTTTAACTCAGGTGTGATTTTTGAAAATGTCTCTGTAATATTTTATCTTCTTTAAAAAAAAGGGGGGGAAATACCAAA GTGTGAAATACTGTGCTACCTTCCAGAGTTCCCACATGGGCTGGGATTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTGAGACAGTCT TGCTCCAGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCATGCTCTGCCACTTGGGTTCAAGCGATTCTCCTGCCTCAGCCT CTCAAGTAGCGGGATTACAGGCGCCCACCACCAAAAATTAGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGG TCAGGCTGGTCTTGAACTCCTGACCTCCTGATCCACCCACCTCAGCGTCCCGAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCTGGC CTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATCTCTAGAGTCTGCTTTTTTGTGGGCCAGTTTGTAGAGATGTAACATGAAG CCATTCCAGAAATGGTAACTTAAAAAAAAAAAGACTACATGTCTAGGAAACTGTTGAGATTCAAAGGAATCTCACTGTTCCTAAATAAAT >In-frame_DTD1_ENST00000377452_chr20_18608877_+_POU2F3_ENST00000543440_chr11_120186070_+_1391nt CTATCGCCAGGCCGAGAGTGGGCGTGGCCGACGTGGGGTGGGTAGCAGCCGACCGAGTCGGACCGGCCAGTTGGGCGCGCTTCCGGGTGT CACCTCCAGAGGGCGCCGGCTGCGGAGCCGCCCTCAGAGTCGCGAGGCCGGACGCAGCGCGGCGCCGCCCCACTCGCCCCAGCCGCCGCC ATGAAGGCCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATTAGTGCCATTGGAAGGGGCATATGTGTGTTG CTGGGTATTTCCCTGGAGGATACGCAGAAGGAACTGGAACACATGGTCCGAAAGATTCTAAACCTGCGTGTATTTGAGGATGAGAGTGGG AAGCACTGGTCGAAGAGTGTGATGGACAAACAGTACGAGATTCTGTGTGTCAGCCAGTTTACCCTCCAGTGTGTCCTGAAGGGAAACAAG CCTGATTTCCACCTAGCAATGCCCACGGAGCAGGCAGAGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAAACATACAGGCCGGAG CTTATCAAAGATGGCAAGTTTGGGGCCTACATGCAGGTGCACATTCAGAATGATGGGCCTGTGACCATAGAGCTGGAATCGCCAGCTCCC GGCACTGCTACCTCTGACCCAAAGCAGGTATCTCCCTCAGGGTCTCTGGGCCCCCTCTCTGTCCCTCCTGTCCACAGTACCATGCCTGGA ACAGTAACGTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAA AATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGATGGAATCATTCCACCTACCTCCACTGA GACCAAAAAGTTTCTCCTACTCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTTCA GAAGAGTGGAAGAAAATCTCCACTATCAATGAACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGA ACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCCCTCCTAGGAGCTTACCATTTTCACCTTCCTTGCCTATGCCCTTGCCTTCT AGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCTTTCAGAGAAAAGACTTCTTGCTGTTATTCTCCAACTCATCCGTGGGCTT CTGGGGACAGCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATC |
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FusionGenePPI for DTD1_POU2F3 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DTD1 | IQCB1, CDC45, TOPBP1, CSNK2A1, ANKMY2, HSF1, CYP1A1, CSNK1E, HARS, MAN2B1, SH2D4A, NEK2, POLK | POU2F3 | BCL6, CREBBP |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for DTD1_POU2F3 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DTD1_POU2F3 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |