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Fusion gene ID: 7763 |
FusionGeneSummary for CNTD2_CNTD2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CNTD2_CNTD2 | Fusion gene ID: 7763 | Hgene | Tgene | Gene symbol | CNTD2 | CNTD2 | Gene ID | 79935 | 79935 |
| Gene name | cyclin N-terminal domain containing 2 | cyclin N-terminal domain containing 2 | |
| Synonyms | CCNP | CCNP | |
| Cytomap | 19q13.2 | 19q13.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | cyclin N-terminal domain-containing protein 2cyclin P | cyclin N-terminal domain-containing protein 2cyclin P | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q9H8S5 | Q9H8S5 | |
| Ensembl transtripts involved in fusion gene | ENST00000430325, ENST00000513948, ENST00000433940, | ENST00000430325, ENST00000513948, ENST00000433940, | |
| Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 1 X 1 X 1=1 |
| # samples | 2 | 2 | |
| ** MAII score | log2(2/1*10)=4.32192809488736 | log2(2/1*10)=4.32192809488736 | |
| Context | PubMed: CNTD2 [Title/Abstract] AND CNTD2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | AI820581 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - | ||
| ChiTaRS3.1 | AA988078 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-3CDS | ENST00000430325 | ENST00000430325 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000430325 | ENST00000513948 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000430325 | ENST00000433940 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000513948 | ENST00000430325 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000513948 | ENST00000513948 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000513948 | ENST00000433940 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000433940 | ENST00000430325 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000433940 | ENST00000513948 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
| intron-3CDS | ENST00000433940 | ENST00000433940 | CNTD2 | chr19 | 40728221 | + | CNTD2 | chr19 | 40730555 | - |
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FusionProtFeatures for CNTD2_CNTD2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CNTD2 | CNTD2 |