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Fusion gene ID: 42970 |
FusionGeneSummary for ZMYND15_ZMYND15 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ZMYND15_ZMYND15 | Fusion gene ID: 42970 | Hgene | Tgene | Gene symbol | ZMYND15 | ZMYND15 | Gene ID | 84225 | 84225 |
| Gene name | zinc finger MYND-type containing 15 | zinc finger MYND-type containing 15 | |
| Synonyms | SPGF14 | SPGF14 | |
| Cytomap | 17p13.2 | 17p13.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | zinc finger MYND domain-containing protein 15 | zinc finger MYND domain-containing protein 15 | |
| Modification date | 20180329 | 20180329 | |
| UniProtAcc | Q9H091 | Q9H091 | |
| Ensembl transtripts involved in fusion gene | ENST00000433935, ENST00000592813, ENST00000269289, ENST00000573751, | ENST00000433935, ENST00000592813, ENST00000269289, ENST00000573751, | |
| Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 2 X 2 X 2=8 |
| # samples | 1 | 2 | |
| ** MAII score | log2(1/1*10)=3.32192809488736 | log2(2/8*10)=1.32192809488736 | |
| Context | PubMed: ZMYND15 [Title/Abstract] AND ZMYND15 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | AL041801 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-intron | ENST00000433935 | ENST00000433935 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000433935 | ENST00000592813 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000433935 | ENST00000269289 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000433935 | ENST00000573751 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000592813 | ENST00000433935 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000592813 | ENST00000592813 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000592813 | ENST00000269289 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000592813 | ENST00000573751 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000269289 | ENST00000433935 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000269289 | ENST00000592813 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000269289 | ENST00000269289 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000269289 | ENST00000573751 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000573751 | ENST00000433935 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000573751 | ENST00000592813 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000573751 | ENST00000269289 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
| 5CDS-intron | ENST00000573751 | ENST00000573751 | ZMYND15 | chr17 | 4649190 | - | ZMYND15 | chr17 | 4643560 | + |
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FusionProtFeatures for ZMYND15_ZMYND15 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ZMYND15 | ZMYND15 |