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Fusion gene ID: 41252 |
FusionGeneSummary for UTP3_UTP3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: UTP3_UTP3 | Fusion gene ID: 41252 | Hgene | Tgene | Gene symbol | UTP3 | UTP3 | Gene ID | 57050 | 57050 |
| Gene name | UTP3, small subunit processome component | UTP3, small subunit processome component | |
| Synonyms | CRL1|CRLZ1|SAS10 | CRL1|CRLZ1|SAS10 | |
| Cytomap | 4q13.3 | 4q13.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | something about silencing protein 10UTP3 homologUTP3, small subunit processome component homologcharged amino acid rich leucine zipper 1 homologcharged amino acid-rich leucine zipper 1disrupter of silencing 10disrupter of silencing SAS10 | something about silencing protein 10UTP3 homologUTP3, small subunit processome component homologcharged amino acid rich leucine zipper 1 homologcharged amino acid-rich leucine zipper 1disrupter of silencing 10disrupter of silencing SAS10 | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q9NQZ2 | Q9NQZ2 | |
| Ensembl transtripts involved in fusion gene | ENST00000254803, | ENST00000254803, | |
| Fusion gene scores | * DoF score | 2 X 2 X 1=4 | 2 X 2 X 1=4 |
| # samples | 2 | 2 | |
| ** MAII score | log2(2/4*10)=2.32192809488736 | log2(2/4*10)=2.32192809488736 | |
| Context | PubMed: UTP3 [Title/Abstract] AND UTP3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | BF834334 | UTP3 | chr4 | 71555122 | - | UTP3 | chr4 | 71554514 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000254803 | ENST00000254803 | UTP3 | chr4 | 71555122 | - | UTP3 | chr4 | 71554514 | + |
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FusionProtFeatures for UTP3_UTP3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| UTP3 | UTP3 |