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Fusion gene ID: 35543 |
FusionGeneSummary for SPARCL1_GBAS |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SPARCL1_GBAS | Fusion gene ID: 35543 | Hgene | Tgene | Gene symbol | SPARCL1 | GBAS | Gene ID | 8404 |
| Gene name | SPARC like 1 | ||
| Synonyms | MAST 9|MAST9|PIG33|SC1 | ||
| Cytomap | 4q22.1 | ||
| Type of gene | protein-coding | ||
| Description | SPARC-like protein 1SPARC-like 1 (hevin)high endothelial venule proteinproliferation-inducing protein 33 | ||
| Modification date | 20180523 | ||
| UniProtAcc | Q14515 | ||
| Ensembl transtripts involved in fusion gene | ENST00000282470, ENST00000418378, ENST00000503414, | ENST00000446778, ENST00000322090, ENST00000487370, | |
| Fusion gene scores | * DoF score | 6 X 7 X 1=42 | 2 X 2 X 2=8 |
| # samples | 7 | 2 | |
| ** MAII score | log2(7/42*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(2/8*10)=1.32192809488736 | |
| Context | PubMed: SPARCL1 [Title/Abstract] AND GBAS [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |