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Fusion gene ID: 31807 |
FusionGeneSummary for RPL18_C15orf57 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: RPL18_C15orf57 | Fusion gene ID: 31807 | Hgene | Tgene | Gene symbol | RPL18 | C15orf57 | Gene ID | 6141 |
| Gene name | ribosomal protein L18 | ||
| Synonyms | L18 | ||
| Cytomap | 19q13.33 | ||
| Type of gene | protein-coding | ||
| Description | 60S ribosomal protein L18large ribosomal subunit protein eL18 | ||
| Modification date | 20180523 | ||
| UniProtAcc | Q07020 | ||
| Ensembl transtripts involved in fusion gene | ENST00000549920, ENST00000550645, ENST00000552588, ENST00000549273, | ENST00000560305, ENST00000561011, ENST00000559911, ENST00000558113, ENST00000358005, ENST00000416810, ENST00000558750, ENST00000558871, ENST00000560109, | |
| Fusion gene scores | * DoF score | 20 X 12 X 6=1440 | 3 X 4 X 1=12 |
| # samples | 21 | 6 | |
| ** MAII score | log2(21/1440*10)=-2.77760757866355 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/12*10)=2.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: RPL18 [Title/Abstract] AND C15orf57 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | RPL18 | GO:0002181 | cytoplasmic translation | 25957688 |