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Fusion gene ID: 31501 |
FusionGeneSummary for RNF19A_KB-1562D12.1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: RNF19A_KB-1562D12.1 | Fusion gene ID: 31501 | Hgene | Tgene | Gene symbol | RNF19A | KB-1562D12.1 | Gene ID | 25897 |
| Gene name | ring finger protein 19A, RBR E3 ubiquitin protein ligase | ||
| Synonyms | RNF19 | ||
| Cytomap | 8q22.2 | ||
| Type of gene | protein-coding | ||
| Description | E3 ubiquitin-protein ligase RNF19Adouble ring-finger proteinprotein p38 interacting with transcription factor Sp1ring finger protein 19ring finger protein 19A, E3 ubiquitin protein ligasering-IBR-ring domain containing protein Dorfin | ||
| Modification date | 20180523 | ||
| UniProtAcc | Q9NV58 | ||
| Ensembl transtripts involved in fusion gene | ENST00000341084, ENST00000519449, ENST00000523255, | ENST00000520268, | |
| Fusion gene scores | * DoF score | 15 X 11 X 8=1320 | 5 X 1 X 4=20 |
| # samples | 19 | 5 | |
| ** MAII score | log2(19/1320*10)=-2.79646660591487 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/20*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: RNF19A [Title/Abstract] AND KB-1562D12.1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |