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Fusion gene ID: 29622 |
FusionGeneSummary for PTRF_ATP6V1A |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PTRF_ATP6V1A | Fusion gene ID: 29622 | Hgene | Tgene | Gene symbol | PTRF | ATP6V1A | Gene ID | 523 |
| Gene name | ATPase H+ transporting V1 subunit A | ||
| Synonyms | ARCL2D|ATP6A1|ATP6V1A1|HO68|VA68|VPP2|Vma1 | ||
| Cytomap | 3q13.31 | ||
| Type of gene | protein-coding | ||
| Description | V-type proton ATPase catalytic subunit AATPase, H+ transporting, lysosomal 70kDa, V1 subunit AATPase, H+ transporting, lysosomal, subunit A1H(+)-transporting two-sector ATPase, subunit AH+-transporting ATPase chain A, vacuolar (VA68 type)V-ATPase 69 | ||
| Modification date | 20180523 | ||
| UniProtAcc | P38606 | ||
| Ensembl transtripts involved in fusion gene | ENST00000357037, | ENST00000273398, ENST00000538620, ENST00000461496, | |
| Fusion gene scores | * DoF score | 7 X 8 X 2=112 | 2 X 2 X 1=4 |
| # samples | 9 | 2 | |
| ** MAII score | log2(9/112*10)=-0.315501825727929 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/4*10)=2.32192809488736 | |
| Context | PubMed: PTRF [Title/Abstract] AND ATP6V1A [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |