FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 29117

FusionGeneSummary for PSMA7_PSMA7

check button Fusion gene summary
Fusion gene informationFusion gene name: PSMA7_PSMA7
Fusion gene ID: 29117
HgeneTgene
Gene symbol

PSMA7

PSMA7

Gene ID

5688

5688

Gene nameproteasome subunit alpha 7proteasome subunit alpha 7
SynonymsC6|HEL-S-276|HSPC|RC6-1|XAPC7C6|HEL-S-276|HSPC|RC6-1|XAPC7
Cytomap

20q13.33

20q13.33

Type of geneprotein-codingprotein-coding
Descriptionproteasome subunit alpha type-7epididymis secretory protein Li 276proteasome (prosome, macropain) subunit, alpha type, 7proteasome subunit RC6-1proteasome subunit XAPC7proteasome subunit alpha 4testicular tissue protein Li 151proteasome subunit alpha type-7epididymis secretory protein Li 276proteasome (prosome, macropain) subunit, alpha type, 7proteasome subunit RC6-1proteasome subunit XAPC7proteasome subunit alpha 4testicular tissue protein Li 151
Modification date2018052320180523
UniProtAcc

O14818

O14818

Ensembl transtripts involved in fusion geneENST00000370873, ENST00000484488, 
ENST00000370861, ENST00000370858, 
ENST00000370873, ENST00000484488, 
ENST00000370861, ENST00000370858, 
Fusion gene scores* DoF score3 X 4 X 1=124 X 5 X 2=40
# samples 45
** MAII scorelog2(4/12*10)=1.73696559416621
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(5/40*10)=0.321928094887362
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: PSMA7 [Title/Abstract] AND PSMA7 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1CA312659PSMA7chr20

60713278

+PSMA7chr20

60713326

-
ChiTaRS3.1BF237904PSMA7chr20

60714879

+PSMA7chr20

60714202

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000370873ENST00000370873PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000370873ENST00000484488PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000370873ENST00000370861PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-intronENST00000370873ENST00000370858PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-3CDSENST00000484488ENST00000370873PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000484488ENST00000484488PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000484488ENST00000370861PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-intronENST00000484488ENST00000370858PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-3CDSENST00000370861ENST00000370873PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000370861ENST00000484488PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000370861ENST00000370861PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-intronENST00000370861ENST00000370858PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-3CDSENST00000370858ENST00000370873PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000370858ENST00000484488PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-5UTRENST00000370858ENST00000370861PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-intronENST00000370858ENST00000370858PSMA7chr20

60713278

+PSMA7chr20

60713326

-
intron-3CDSENST00000370873ENST00000370873PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000370873ENST00000484488PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000370873ENST00000370861PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-intronENST00000370873ENST00000370858PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-3CDSENST00000484488ENST00000370873PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000484488ENST00000484488PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000484488ENST00000370861PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-intronENST00000484488ENST00000370858PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-3CDSENST00000370861ENST00000370873PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000370861ENST00000484488PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000370861ENST00000370861PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-intronENST00000370861ENST00000370858PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-3CDSENST00000370858ENST00000370873PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000370858ENST00000484488PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-5UTRENST00000370858ENST00000370861PSMA7chr20

60714879

+PSMA7chr20

60714202

-
intron-intronENST00000370858ENST00000370858PSMA7chr20

60714879

+PSMA7chr20

60714202

-

Top

FusionProtFeatures for PSMA7_PSMA7


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
PSMA7

O14818

PSMA7

O14818