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Fusion gene ID: 25606 |
FusionGeneSummary for OSTF1_SMARCA4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: OSTF1_SMARCA4 | Fusion gene ID: 25606 | Hgene | Tgene | Gene symbol | OSTF1 | SMARCA4 | Gene ID | 26578 | 6597 |
Gene name | osteoclast stimulating factor 1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | |
Synonyms | OSF|SH3P2|bA235O14.1 | BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b | |
Cytomap | 9q21.13 | 19p13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | osteoclast-stimulating factor 1 | transcription activator BRG1ATP-dependent helicase SMARCA4BRG1-associated factor 190ABRM/SWI2-related gene 1SNF2-betaSNF2-like 4brahma protein-like 1global transcription activator homologous sequencehomeotic gene regulatormitotic growth and trans | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | Q92882 | P51532 | |
Ensembl transtripts involved in fusion gene | ENST00000346234, | ENST00000358026, ENST00000344626, ENST00000429416, ENST00000541122, ENST00000589677, ENST00000444061, ENST00000590574, ENST00000413806, ENST00000450717, ENST00000538456, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 12 X 14 X 8=1344 |
# samples | 2 | 15 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(15/1344*10)=-3.16349873228288 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: OSTF1 [Title/Abstract] AND SMARCA4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SMARCA4 | GO:0006337 | nucleosome disassembly | 8895581 |
Tgene | SMARCA4 | GO:0006338 | chromatin remodeling | 10943845|11726552 |
Tgene | SMARCA4 | GO:0045892 | negative regulation of transcription, DNA-templated | 12065415 |
Tgene | SMARCA4 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 15774904|17938176 |
Tgene | SMARCA4 | GO:0051091 | positive regulation of DNA binding transcription factor activity | 11950834|17938176 |
Tgene | SMARCA4 | GO:1902661 | positive regulation of glucose mediated signaling pathway | 22368283 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SARC | TCGA-DX-A48N-01A | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000346234 | ENST00000358026 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000344626 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000429416 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000541122 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000589677 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000444061 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000590574 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000413806 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
In-frame | ENST00000346234 | ENST00000450717 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
5CDS-intron | ENST00000346234 | ENST00000538456 | OSTF1 | chr9 | 77703642 | + | SMARCA4 | chr19 | 11141406 | + |
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FusionProtFeatures for OSTF1_SMARCA4 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
OSTF1 | SMARCA4 |
Induces bone resorption, acting probably through asignaling cascade which results in the secretion of factor(s)enhancing osteoclast formation and activity.{ECO:0000269|PubMed:10092216}. | Involved in transcriptional activation and repression ofselect genes by chromatin remodeling (alteration of DNA-nucleosometopology). Component of SWI/SNF chromatin remodeling complexesthat carry out key enzymatic activities, changing chromatinstructure by altering DNA-histone contacts within a nucleosome inan ATP-dependent manner. Component of the CREST-BRG1 complex, amultiprotein complex that regulates promoter activation byorchestrating the calcium-dependent release of a repressor complexand the recruitment of an activator complex. In resting neurons,transcription of the c-FOS promoter is inhibited by SMARCA4-dependent recruitment of a phospho-RB1-HDAC repressor complex.Upon calcium influx, RB1 is dephosphorylated by calcineurin, whichleads to release of the repressor complex. At the same time, thereis increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation.The CREST-BRG1 complex also binds to the NR2B promoter, andactivity-dependent induction of NR2B expression involves therelease of HDAC1 and recruitment of CREBBP. Belongs to the neuralprogenitors-specific chromatin remodeling complex (npBAF complex)and the neuron-specific chromatin remodeling complex (nBAFcomplex). During neural development, a switch from astem/progenitor to a postmitotic chromatin remodeling mechanismoccurs as neurons exit the cell cycle and become committed totheir adult state. The transition from proliferating neuralstem/progenitor cells to postmitotic neurons requires a switch insubunit composition of the npBAF and nBAF complexes. As neuralprogenitors exit mitosis and differentiate into neurons, npBAFcomplexes which contain ACTL6A/BAF53A and PHF10/BAF45A, areexchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45Bor DPF3/BAF45C subunits in neuron-specific complexes (nBAF). ThenpBAF complex is essential for the self-renewal/proliferativecapacity of the multipotent neural stem cells. The nBAF complexalong with CREST plays a role regulating the activity of genesessential for dendrite growth. SMARCA4/BAF190A may promote neuralstem cell self-renewal/proliferation by enhancing Notch-dependentproliferative signals, while concurrently making the neural stemcell insensitive to SHH-dependent differentiating cues (Bysimilarity). Acts as a corepressor of ZEB1 to regulate E-cadherintranscription and is required for induction of epithelial-mesenchymal transition (EMT) by ZEB1. Binds via DLX1 to enhancerslocated in the intergenic region between DLX5 and DLX6 and thisbinding is stabilized by the long non-coding RNA (lncRNA) Evf2 (Bysimilarity). Binds to RNA in a promiscuous manner (By similarity).Binding to RNAs including lncRNA Evf2 leads to inhibition ofSMARCA4 ATPase and chromatin remodeling activities (Bysimilarity). {ECO:0000250|UniProtKB:Q3TKT4,ECO:0000269|PubMed:19571879, ECO:0000269|PubMed:20418909,ECO:0000303|PubMed:22952240, ECO:0000303|PubMed:26601204}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | OSTF1 | chr9:77703642 | chr19:11141406 | ENST00000346234 | + | 1 | 10 | 4_11 | 11 | 215 | Compositional bias | Note=Pro-rich |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 1360_1364 | 1127 | 1648 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 1571_1584 | 1127 | 1648 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 1360_1364 | 1127 | 1618 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 1571_1584 | 1127 | 1618 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 1360_1364 | 1127 | 1648 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 1571_1584 | 1127 | 1648 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 1360_1364 | 1127 | 1614 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 1571_1584 | 1127 | 1614 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 1360_1364 | 1127 | 1617 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 1571_1584 | 1127 | 1617 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 1360_1364 | 1127 | 1618 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 1571_1584 | 1127 | 1618 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 1360_1364 | 1127 | 1617 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 1571_1584 | 1127 | 1617 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 1360_1364 | 1127 | 1615 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 1571_1584 | 1127 | 1615 | Compositional bias | Note=Poly-Glu |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 1477_1547 | 1127 | 1648 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 1477_1547 | 1127 | 1618 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 1477_1547 | 1127 | 1648 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 1477_1547 | 1127 | 1614 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 1477_1547 | 1127 | 1617 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 1477_1547 | 1127 | 1618 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 1477_1547 | 1127 | 1617 | Domain | Bromo |
Tgene | >SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 1477_1547 | 1127 | 1615 | Domain | Bromo |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >OSTF1 | chr9:77703642 | chr19:11141406 | ENST00000346234 | + | 1 | 10 | 12_71 | 11 | 215 | Domain | SH3 |
Hgene | >OSTF1 | chr9:77703642 | chr19:11141406 | ENST00000346234 | + | 1 | 10 | 105_135 | 11 | 215 | Repeat | Note=ANK 2 |
Hgene | >OSTF1 | chr9:77703642 | chr19:11141406 | ENST00000346234 | + | 1 | 10 | 139_168 | 11 | 215 | Repeat | Note=ANK 3 |
Hgene | >OSTF1 | chr9:77703642 | chr19:11141406 | ENST00000346234 | + | 1 | 10 | 72_101 | 11 | 215 | Repeat | Note=ANK 1 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 578_588 | 1127 | 1648 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 663_672 | 1127 | 1648 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 578_588 | 1127 | 1618 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 663_672 | 1127 | 1618 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 578_588 | 1127 | 1648 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 663_672 | 1127 | 1648 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 578_588 | 1127 | 1614 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 663_672 | 1127 | 1614 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 578_588 | 1127 | 1617 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 663_672 | 1127 | 1617 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 578_588 | 1127 | 1618 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 663_672 | 1127 | 1618 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 578_588 | 1127 | 1617 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 663_672 | 1127 | 1617 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 578_588 | 1127 | 1615 | Compositional bias | Note=Poly-Lys |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 663_672 | 1127 | 1615 | Compositional bias | Note=Poly-Glu |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 1084_1246 | 1127 | 1648 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 171_206 | 1127 | 1648 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 460_532 | 1127 | 1648 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 766_931 | 1127 | 1648 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 1084_1246 | 1127 | 1618 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 171_206 | 1127 | 1618 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 460_532 | 1127 | 1618 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 766_931 | 1127 | 1618 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 1084_1246 | 1127 | 1648 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 171_206 | 1127 | 1648 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 460_532 | 1127 | 1648 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 766_931 | 1127 | 1648 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 1084_1246 | 1127 | 1614 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 171_206 | 1127 | 1614 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 460_532 | 1127 | 1614 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 766_931 | 1127 | 1614 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 1084_1246 | 1127 | 1617 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 171_206 | 1127 | 1617 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 460_532 | 1127 | 1617 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 766_931 | 1127 | 1617 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 1084_1246 | 1127 | 1618 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 171_206 | 1127 | 1618 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 460_532 | 1127 | 1618 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 766_931 | 1127 | 1618 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 1084_1246 | 1127 | 1617 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 171_206 | 1127 | 1617 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 460_532 | 1127 | 1617 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 766_931 | 1127 | 1617 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 1084_1246 | 1127 | 1615 | Domain | Helicase C-terminal |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 171_206 | 1127 | 1615 | Domain | QLQ |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 460_532 | 1127 | 1615 | Domain | HSA |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 766_931 | 1127 | 1615 | Domain | Helicase ATP-binding |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 881_884 | 1127 | 1648 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 881_884 | 1127 | 1618 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 881_884 | 1127 | 1648 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 881_884 | 1127 | 1614 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 881_884 | 1127 | 1617 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 881_884 | 1127 | 1618 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 881_884 | 1127 | 1617 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 881_884 | 1127 | 1615 | Motif | Note=DEGH box |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 779_786 | 1127 | 1648 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 779_786 | 1127 | 1618 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 779_786 | 1127 | 1648 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 779_786 | 1127 | 1614 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 779_786 | 1127 | 1617 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 779_786 | 1127 | 1618 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 779_786 | 1127 | 1617 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 779_786 | 1127 | 1615 | Nucleotide binding | ATP |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000344626 | + | 23 | 35 | 462_728 | 1127 | 1648 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000413806 | + | 22 | 33 | 462_728 | 1127 | 1618 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000429416 | + | 24 | 36 | 462_728 | 1127 | 1648 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000444061 | + | 24 | 35 | 462_728 | 1127 | 1614 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000450717 | + | 22 | 33 | 462_728 | 1127 | 1617 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000541122 | + | 24 | 35 | 462_728 | 1127 | 1618 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000589677 | + | 24 | 35 | 462_728 | 1127 | 1617 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
Tgene | SMARCA4 | chr9:77703642 | chr19:11141406 | ENST00000590574 | + | 23 | 34 | 462_728 | 1127 | 1615 | Region | RNA-binding region which is sufficient for binding to lncRNA Evf2 |
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FusionGeneSequence for OSTF1_SMARCA4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000358026_chr19_11141406_+_564aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEV PDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEK QWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRG RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKP >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000344626_chr19_11141406_+_532aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEV PDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEK QWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSS SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000429416_chr19_11141406_+_532aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEV PDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEK QWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSS SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000541122_chr19_11141406_+_502aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRD SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVD FKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVK >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000589677_chr19_11141406_+_501aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRD SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF KKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKI >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000444061_chr19_11141406_+_498aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDA GSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKI KERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000590574_chr19_11141406_+_499aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDA GSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKK IKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKL >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000413806_chr19_11141406_+_502aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRD SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVD FKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVK >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000450717_chr19_11141406_+_501aa MSKPPPKPVKPGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT VNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRD SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF KKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKI |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000358026_chr19_11141406_+_1692nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGAGCAGACACTGCAGCACGGGCAGC GGCAGTGCCAGCTTCGCCCACACTGCCCCTCCGCCAGCGGGCGTCAACCCCGACTTGGAGGAGCCACCTCTAAAGGAGGAAGACGAGGTG CCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAG GAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGG CTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAG CAGTGGCTCAAGAAAATTACAGGAAAAGATATCCATGACACAGCCAGCAGTGTGGCACGTGGGCTACAATTCCAGCGTGGCCTTCAGTTC TGCACACGTGCGTCAAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAG CGAGACAGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGG CGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGAC AGCAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCC GTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAG AACGCACAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATC GAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAA GTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000344626_chr19_11141406_+_1596nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGAGCAGACACTGCAGCACGGGCAGC GGCAGTGCCAGCTTCGCCCACACTGCCCCTCCGCCAGCGGGCGTCAACCCCGACTTGGAGGAGCCACCTCTAAAGGAGGAAGACGAGGTG CCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAG GAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGG CTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAG CAGTGGCTCAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGAC AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCG CCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGC AGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGAC TTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCA CAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAG GAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAG ATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000429416_chr19_11141406_+_1596nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGAGCAGACACTGCAGCACGGGCAGC GGCAGTGCCAGCTTCGCCCACACTGCCCCTCCGCCAGCGGGCGTCAACCCCGACTTGGAGGAGCCACCTCTAAAGGAGGAAGACGAGGTG CCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAG GAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGG CTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAG CAGTGGCTCAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGAC AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCG CCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGC AGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGAC TTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCA CAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAG GAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAG ATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000541122_chr19_11141406_+_1506nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGAC GAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGC AACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGT GAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTC AAGACCCTGAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGAC AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCG CCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGC AGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGAC TTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCA CAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAG GAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAG ATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000589677_chr19_11141406_+_1503nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGAC GAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGC AACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGT GAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTC AAGACCCTGAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGAC AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCG CCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGT GGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTC AAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAG ACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAG GATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATC AAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGT >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000444061_chr19_11141406_+_1494nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGAC GAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGC AACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGT GAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTC AAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCC GGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAG AAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGTGGACGTCAG CTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATA AAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAAC CTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGT GAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGC CGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGAC >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000590574_chr19_11141406_+_1497nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGAC GAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGC AACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGT GAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTC AAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCC GGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAG AAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGT CAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAG ATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTC AACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGAC AGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTT GGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGAT >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000413806_chr19_11141406_+_1506nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGAC GAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGC AACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGT GAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTC AAGACCCTGAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGAC AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCG CCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGC AGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGAC TTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCA CAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAG GAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAG ATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000450717_chr19_11141406_+_1503nt ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGC TCTGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGC GACTGGAATCCTCACCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACC GTCAACAGCGTGGAGGAGAAGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAG AAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGAC GAGACCGTCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGC AACCCCAAGCGGAAGCCGCGCCTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGT GAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTC AAGACCCTGAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGAC AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCG CCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGT GGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTC AAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAG ACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAG GATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATC AAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000358026_chr19_11141406_+_2308nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGAGCAGACACTGCAGCACGGGCAGCGGCAGTGCCAGCTTCGCCCACACTGCCCCT CCGCCAGCGGGCGTCAACCCCGACTTGGAGGAGCCACCTCTAAAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATC GCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGC CTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATG TTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGAAAATTACAGGAAAAGAT ATCCATGACACAGCCAGCAGTGTGGCACGTGGGCTACAATTCCAGCGTGGCCTTCAGTTCTGCACACGTGCGTCAAAGGCCATCGAGGAG GGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCG ACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAAC CCACCCAACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGTCAGCTCAGCGAGGTC TTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATT CGCAACCACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCC CTGATCTATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAG AGTGAGGAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAG GCACAGGACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAA CAAGAGGAGGACCGCTCAGGAAGTGGCAGCGAAGAAGACTGAGCCCCGACATTCCAGTCTCGACCCCGAGCCCCTCGTTCCAGAGCTGAG ATGGCATAGGCCTTAGCAGTAACGGGTAGCAGCAGATGTAGTTTCAGACTTGGAGTAAAACTGTATAAACAAAAGAATCTTCCATATTTA TACAGCAGAGAAGCTGTAGGACTGTTTGTGACTGGCCCTGTCCTGGCATCAGTAGCATCTGTAACAGCATTAACTGTCTTAAAGAGAGAG AGAGAGAATTCCGAATTGGGGAACACACGATACCTGTTTTTCTTTTCCGTTGCTGGCAGTACTGTTGCGCCGCAGTTTGGAGTCACTGTA GTTAAGTGTGGATGCATGTGCGTCACCGTCCACTCCTCCTACTGTATTTTATTGGACAGGTCAGACTCGCCGGGGGCCCGGCGAGGGTAT >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000344626_chr19_11141406_+_1989nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGAGCAGACACTGCAGCACGGGCAGCGGCAGTGCCAGCTTCGCCCACACTGCCCCT CCGCCAGCGGGCGTCAACCCCGACTTGGAGGAGCCACCTCTAAAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATC GCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGC CTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATG TTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGGCCATCGAGGAGGGCACG CTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACC AGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCC AACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATC CAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAAC CACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATC TATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAG GAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAG GACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAG GAGGACCGCTCAGGAAGTGGCAGCGAAGAAGACTGAGCCCCGACATTCCAGTCTCGACCCCGAGCCCCTCGTTCCAGAGCTGAGATGGCA TAGGCCTTAGCAGTAACGGGTAGCAGCAGATGTAGTTTCAGACTTGGAGTAAAACTGTATAAACAAAAGAATCTTCCATATTTATACAGC AGAGAAGCTGTAGGACTGTTTGTGACTGGCCCTGTCCTGGCATCAGTAGCATCTGTAACAGCATTAACTGTCTTAAAGAGAGAGAGAGAG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000429416_chr19_11141406_+_2212nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGAGCAGACACTGCAGCACGGGCAGCGGCAGTGCCAGCTTCGCCCACACTGCCCCT CCGCCAGCGGGCGTCAACCCCGACTTGGAGGAGCCACCTCTAAAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATC GCCCGGCACGAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGC CTCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATG TTCGGCCGTGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGGCCATCGAGGAGGGCACG CTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACC AGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCC AACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATC CAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAAC CACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATC TATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAG GAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAG GACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAG GAGGACCGCTCAGGAAGTGGCAGCGAAGAAGACTGAGCCCCGACATTCCAGTCTCGACCCCGAGCCCCTCGTTCCAGAGCTGAGATGGCA TAGGCCTTAGCAGTAACGGGTAGCAGCAGATGTAGTTTCAGACTTGGAGTAAAACTGTATAAACAAAAGAATCTTCCATATTTATACAGC AGAGAAGCTGTAGGACTGTTTGTGACTGGCCCTGTCCTGGCATCAGTAGCATCTGTAACAGCATTAACTGTCTTAAAGAGAGAGAGAGAG AATTCCGAATTGGGGAACACACGATACCTGTTTTTCTTTTCCGTTGCTGGCAGTACTGTTGCGCCGCAGTTTGGAGTCACTGTAGTTAAG TGTGGATGCATGTGCGTCACCGTCCACTCCTCCTACTGTATTTTATTGGACAGGTCAGACTCGCCGGGGGCCCGGCGAGGGTATGTCAGT >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000541122_chr19_11141406_+_1656nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCAC GAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAG GAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGT GGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGACCCTGAAGGCCATCGAGGAGGGCACG CTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACC AGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCC AACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATC CAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAAC CACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATC TATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAG GAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAG GACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000589677_chr19_11141406_+_1653nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCAC GAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAG GAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGT GGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGACCCTGAAGGCCATCGAGGAGGGCACG CTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACC AGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCC AACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATCCAG CTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAACCAC AAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATCTAT GAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAGGAG GAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAGGAC CGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAGGAG >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000444061_chr19_11141406_+_1644nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCAC GAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAG GAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGT GGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGGCCATCGAGGAGGGCACGCTGGAGGAG ATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGC AGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACC AAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCCTCG CGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTACCGC AGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGACTCC ATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAAGAG GGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTGAAG GGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAGGAGGACCGCTCA >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000590574_chr19_11141406_+_1647nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCAC GAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAG GAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGT GGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGGCCATCGAGGAGGGCACGCTGGAGGAG ATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGC AGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCACC AAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATCCAGCTGCCC TCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAACCACAAGTAC CGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATCTATGAAGAC TCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAGGAGGAGGAA GAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAGGACCGGCTG AAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAGGAGGACCGC >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000413806_chr19_11141406_+_2122nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCAC GAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAG GAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGT GGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGACCCTGAAGGCCATCGAGGAGGGCACG CTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACC AGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCC AACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATC CAGCTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAAC CACAAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATC TATGAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAG GAGGAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAG GACCGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAG GAGGACCGCTCAGGAAGTGGCAGCGAAGAAGACTGAGCCCCGACATTCCAGTCTCGACCCCGAGCCCCTCGTTCCAGAGCTGAGATGGCA TAGGCCTTAGCAGTAACGGGTAGCAGCAGATGTAGTTTCAGACTTGGAGTAAAACTGTATAAACAAAAGAATCTTCCATATTTATACAGC AGAGAAGCTGTAGGACTGTTTGTGACTGGCCCTGTCCTGGCATCAGTAGCATCTGTAACAGCATTAACTGTCTTAAAGAGAGAGAGAGAG AATTCCGAATTGGGGAACACACGATACCTGTTTTTCTTTTCCGTTGCTGGCAGTACTGTTGCGCCGCAGTTTGGAGTCACTGTAGTTAAG TGTGGATGCATGTGCGTCACCGTCCACTCCTCCTACTGTATTTTATTGGACAGGTCAGACTCGCCGGGGGCCCGGCGAGGGTATGTCAGT >In-frame_OSTF1_ENST00000346234_chr9_77703642_+_SMARCA4_ENST00000450717_chr19_11141406_+_2119nt CTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGCCCGGAGTGCCAGGT GGCGGGCAAGCGGTGGGCTTTTCGGCGGGGTCTTTAGGATTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA CCAGGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCCGGCTCTGAGTACTTCATCTTCCTGCTCAGCACC CGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGCAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGACCTGCAAGCG CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCGTGTGCTCCGCCTCTGCACCGTCAACAGCGTGGAGGAGAAGATCCTAGCT GCAGCCAAGTACAAGCTCAACGTGGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTC CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGAGGAAGACGAGGTGCCCGACGACGAGACCGTCAACCAGATGATCGCCCGGCAC GAGGAGGAGTTTGATCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCGCGCCTCATGGAG GAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAGGAGAAGATGTTCGGCCGT GGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCACTGACGGAGAAGCAGTGGCTCAAGACCCTGAAGGCCATCGAGGAGGGCACG CTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGACCACC AGCACCCGCAGCCGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGGGCGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCC AACCTCACCAAGAAGATGAAGAAGATTGTGGATGCCGTGATCAAGTACAAGGACAGCAGTGGACGTCAGCTCAGCGAGGTCTTCATCCAG CTGCCCTCGCGAAAGGAGCTGCCCGAGTACTACGAGCTCATCCGCAAGCCCGTGGACTTCAAGAAGATAAAGGAGCGCATTCGCAACCAC AAGTACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGCCAGAACGCACAGACCTTCAACCTGGAGGGCTCCCTGATCTAT GAAGACTCCATCGTCTTGCAGTCGGTCTTCACCAGCGTGCGGCAGAAAATCGAGAAGGAGGATGACAGTGAAGGCGAGGAGAGTGAGGAG GAGGAAGAGGGCGAGGAGGAAGGCTCCGAATCCGAATCTCGGTCCGTCAAAGTGAAGATCAAGCTTGGCCGGAAGGAGAAGGCACAGGAC CGGCTGAAGGGCGGCCGGCGGCGGCCGAGCCGAGGGTCCCGAGCCAAGCCGGTCGTGAGTGACGATGACAGTGAGGAGGAACAAGAGGAG GACCGCTCAGGAAGTGGCAGCGAAGAAGACTGAGCCCCGACATTCCAGTCTCGACCCCGAGCCCCTCGTTCCAGAGCTGAGATGGCATAG GCCTTAGCAGTAACGGGTAGCAGCAGATGTAGTTTCAGACTTGGAGTAAAACTGTATAAACAAAAGAATCTTCCATATTTATACAGCAGA GAAGCTGTAGGACTGTTTGTGACTGGCCCTGTCCTGGCATCAGTAGCATCTGTAACAGCATTAACTGTCTTAAAGAGAGAGAGAGAGAAT TCCGAATTGGGGAACACACGATACCTGTTTTTCTTTTCCGTTGCTGGCAGTACTGTTGCGCCGCAGTTTGGAGTCACTGTAGTTAAGTGT GGATGCATGTGCGTCACCGTCCACTCCTCCTACTGTATTTTATTGGACAGGTCAGACTCGCCGGGGGCCCGGCGAGGGTATGTCAGTGTC |
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FusionGenePPI for OSTF1_SMARCA4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
OSTF1 | CLEC3B, FABP4, ADI1, EXT1, GAPDH, MAPK6, ELAVL1, KHDRBS1, FASLG, CBL, SRC, ACTB, APP, CLNS1A, NUDCD2, HTT, MED28, REL, SDCBP, EFS, TRIM54, RP2, TMEM185A, TPM3, TPM4, ERRFI1, MYO1F, KLHL42, POP4, MYO1E, PXDNL, CHMP2A, FOXA1, LMNA | SMARCA4 | ESR1, FANCA, ARID1B, RELB, MYC, BRCA1, CTNNB1, NR3C1, SMARCD1, SMARCB1, POLR2A, SMARCC1, SIN3A, HDAC2, RBBP4, KLF1, GATA1, SP1, CCNE1, TP53, HSF1, PHB, RB1, AHR, STAT2, ARID1A, SMARCC2, SMARCE1, ACTL6A, STK11, CBX5, MED17, HSP90B1, NCOR2, NCOR1, ACTB, CREBBP, NCOA1, ING1, PABPN1, AR, ZMYND8, TAF10, PMS2, MYOD1, SMARCA2, JUNB, LMNB1, SRF, MYOCD, CDKN2A, SS18L1, HDAC1, HDAC3, CDYL, ADD1, NR4A2, MCPH1, REST, DDX5, H2AFX, NFE2L2, BCL7C, BRD7, PAX6, CREB1, HSF4, CEBPA, CDX2, MYOG, MYEF2, ATF3, PRMT5, SMARCD2, SIN3B, CHD4, BRWD1, HNRNPC, STAT1, USF1, IRF1, RCOR1, CIITA, ZMIZ2, GMNN, NEUROG2, NEUROD1, NF1, PBX1, NR1H2, RXRA, HIF1A, STAT3, NONO, SMAD2, SMAD3, CARM1, ADNP, STAT5A, CEBPB, PML, MKL1, DPF2, NPM1, KPNA2, BCL7A, ZEB1, HDAC9, TOPBP1, TRIM28, RUNX1, WDR77, HIST1H3A, BCL6, CHD7, PBRM1, ARID2, MARK4, BRD4, WHSC1L1, SMARCAD1, MBD3, KLF4, CDK19, CDK8, MED6, SIRT7, ANGPTL4, ACTC1, SETD7, DPF3, PHF10, DPF1, CHFR, KDM6A, TBX5, SMARCD3, NR2C1, CUL3, COPS5, CAND1, HIST1H4F, HIST2H3C, HIST2H2BE, CHMP5, IKZF1, RBL1, RBL2, RPS6KA5, BAZ1B, TOP2B, CPSF2, SMARCA1, CAD, NOTCH1, RBPJ, MAML1, EPAS1, PPARG, MPP6, FBXO6, WWOX, OBSL1, EED, RNF2, BMI1, SS18, HSPB1, NTRK1, BYSL, EP400, HMGB1, MDC1, MYO18A, PELO, BCL7B, GTF3C3, NOP56, POLR3A, POLR3C, POLR3F, SMC3, UPF1, SCARNA22, MDM2, HIST1H3E, CAT, KPNA1, RAB5C, REEP5, VAPA, PARD6A, NEIL3, ATL2, PAPD5, GLI1, NFATC1, FOXE1, FOXO1, CDC5L, NFATC2, CHEK1, NCL, SPTA1, TRIM25, YAP1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for OSTF1_SMARCA4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for OSTF1_SMARCA4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | SMARCA4 | C0262584 | Carcinoma, Small Cell | 4 | CTD_human |
Tgene | SMARCA4 | C0919267 | ovarian neoplasm | 4 | CTD_human |
Tgene | SMARCA4 | C0006413 | Burkitt Lymphoma | 1 | CTD_human |
Tgene | SMARCA4 | C0036920 | Sezary Syndrome | 1 | CTD_human |
Tgene | SMARCA4 | C0039981 | Thoracic Neoplasms | 1 | CTD_human |
Tgene | SMARCA4 | C0149925 | Small cell carcinoma of lung | 1 | CTD_human |
Tgene | SMARCA4 | C0265338 | Coffin-Siris syndrome | 1 | CTD_human;ORPHANET |
Tgene | SMARCA4 | C1261473 | Sarcoma | 1 | CTD_human |
Tgene | SMARCA4 | C3553249 | MENTAL RETARDATION, AUTOSOMAL DOMINANT 16 | 1 | UNIPROT |