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Fusion gene ID: 18226 |
FusionGeneSummary for KBTBD6_TEX29 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: KBTBD6_TEX29 | Fusion gene ID: 18226 | Hgene | Tgene | Gene symbol | KBTBD6 | TEX29 | Gene ID | 89890 | 121793 |
| Gene name | kelch repeat and BTB domain containing 6 | testis expressed 29 | |
| Synonyms | - | C13orf16|bA474D23.1 | |
| Cytomap | 13q14.11 | 13q34 | |
| Type of gene | protein-coding | protein-coding | |
| Description | kelch repeat and BTB domain-containing protein 6kelch repeat and BTB (POZ) domain containing 6 | testis-expressed protein 29testis-expressed sequence 29 protein | |
| Modification date | 20180522 | 20180519 | |
| UniProtAcc | Q86V97 | Q8N6K0 | |
| Ensembl transtripts involved in fusion gene | ENST00000379485, ENST00000499385, | ENST00000283547, | |
| Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 1 X 1 X 1=1 |
| # samples | 1 | 1 | |
| ** MAII score | log2(1/1*10)=3.32192809488736 | log2(1/1*10)=3.32192809488736 | |
| Context | PubMed: KBTBD6 [Title/Abstract] AND TEX29 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | BLCA | TCGA-UY-A78N-01A | KBTBD6 | chr13 | 41706838 | - | TEX29 | chr13 | 111968532 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-intron | ENST00000379485 | ENST00000283547 | KBTBD6 | chr13 | 41706838 | - | TEX29 | chr13 | 111968532 | + |
| intron-intron | ENST00000499385 | ENST00000283547 | KBTBD6 | chr13 | 41706838 | - | TEX29 | chr13 | 111968532 | + |
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FusionProtFeatures for KBTBD6_TEX29 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| KBTBD6 | TEX29 |