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Fusion gene ID: 13832 |
FusionGeneSummary for FOXP1_COQ10B |
Fusion gene summary |
Fusion gene information | Fusion gene name: FOXP1_COQ10B | Fusion gene ID: 13832 | Hgene | Tgene | Gene symbol | FOXP1 | COQ10B | Gene ID | 27086 | 80219 |
Gene name | forkhead box P1 | coenzyme Q10B | |
Synonyms | 12CC4|HSPC215|MFH|QRF1|hFKH1B | - | |
Cytomap | 3p13 | 2q33.1 | |
Type of gene | protein-coding | protein-coding | |
Description | forkhead box protein P1fork head-related protein like Bglutamine-rich factor 1mac-1-regulated forkhead | coenzyme Q-binding protein COQ10 homolog B, mitochondrialcoenzyme Q10 homolog B | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | Q9H334 | Q9H8M1 | |
Ensembl transtripts involved in fusion gene | ENST00000318789, ENST00000475937, ENST00000493089, ENST00000484350, ENST00000318779, ENST00000491238, ENST00000498215, ENST00000468577, ENST00000472382, | ENST00000263960, ENST00000409398, ENST00000488445, ENST00000545340, ENST00000409010, | |
Fusion gene scores | * DoF score | 21 X 13 X 11=3003 | 4 X 3 X 4=48 |
# samples | 26 | 4 | |
** MAII score | log2(26/3003*10)=-3.52982094652869 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FOXP1 [Title/Abstract] AND COQ10B [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FOXP1 | GO:0002903 | negative regulation of B cell apoptotic process | 25267198 |
Hgene | FOXP1 | GO:0030316 | osteoclast differentiation | 18799727 |
Hgene | FOXP1 | GO:0032496 | response to lipopolysaccharide | 18799727 |
Hgene | FOXP1 | GO:0032680 | regulation of tumor necrosis factor production | 18799727 |
Hgene | FOXP1 | GO:0035926 | chemokine (C-C motif) ligand 2 secretion | 18799727 |
Hgene | FOXP1 | GO:0036035 | osteoclast development | 18799727 |
Hgene | FOXP1 | GO:0042116 | macrophage activation | 18799727 |
Hgene | FOXP1 | GO:0042117 | monocyte activation | 18799727 |
Hgene | FOXP1 | GO:0045655 | regulation of monocyte differentiation | 15286807 |
Hgene | FOXP1 | GO:0045892 | negative regulation of transcription, DNA-templated | 20950788 |
Hgene | FOXP1 | GO:0050706 | regulation of interleukin-1 beta secretion | 18799727 |
Hgene | FOXP1 | GO:0050727 | regulation of inflammatory response | 18799727 |
Hgene | FOXP1 | GO:0060766 | negative regulation of androgen receptor signaling pathway | 18640093 |
Hgene | FOXP1 | GO:1900424 | regulation of defense response to bacterium | 18799727 |
Hgene | FOXP1 | GO:1901256 | regulation of macrophage colony-stimulating factor production | 18799727 |
Hgene | FOXP1 | GO:2001182 | regulation of interleukin-12 secretion | 18799727 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-J4-A83N-01A | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000318789 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
In-frame | ENST00000318789 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000318789 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000318789 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000318789 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000475937 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000475937 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000475937 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000475937 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000475937 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
In-frame | ENST00000493089 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
In-frame | ENST00000493089 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000493089 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000493089 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000493089 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000484350 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000484350 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000484350 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000484350 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000484350 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
intron-3CDS | ENST00000318779 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
intron-3CDS | ENST00000318779 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
intron-intron | ENST00000318779 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
intron-intron | ENST00000318779 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
intron-intron | ENST00000318779 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000491238 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000491238 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000491238 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000491238 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000491238 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000498215 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000498215 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000498215 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000498215 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000498215 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000468577 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
Frame-shift | ENST00000468577 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000468577 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000468577 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5CDS-intron | ENST00000468577 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5UTR-3CDS | ENST00000472382 | ENST00000263960 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5UTR-3CDS | ENST00000472382 | ENST00000409398 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5UTR-intron | ENST00000472382 | ENST00000488445 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5UTR-intron | ENST00000472382 | ENST00000545340 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
5UTR-intron | ENST00000472382 | ENST00000409010 | FOXP1 | chr3 | 71090479 | - | COQ10B | chr2 | 198334794 | + |
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FusionProtFeatures for FOXP1_COQ10B |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
FOXP1 | COQ10B |
Required for the function of coenzyme Q in therespiratory chain. May serve as a chaperone or may be involved inthe transport of Q6 from its site of synthesis to the catalyticsites of the respiratory complexes (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318789 | - | 11 | 21 | 55_230 | 289 | 678 | Compositional bias | Note=Gln-rich |
Hgene | FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000475937 | - | 10 | 20 | 55_230 | 289 | 678 | Compositional bias | Note=Gln-rich |
Hgene | FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000493089 | - | 11 | 21 | 55_230 | 289 | 677 | Compositional bias | Note=Gln-rich |
Hgene | FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000498215 | - | 7 | 17 | 55_230 | 289 | 678 | Compositional bias | Note=Gln-rich |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318779 | - | 1 | 7 | 55_230 | -159 | 115 | Compositional bias | Note=Gln-rich |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000484350 | - | 6 | 16 | 55_230 | 213 | 602 | Compositional bias | Note=Gln-rich |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318779 | - | 1 | 7 | 465_555 | -159 | 115 | DNA binding | Fork-head |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318789 | - | 11 | 21 | 465_555 | 289 | 678 | DNA binding | Fork-head |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000475937 | - | 10 | 20 | 465_555 | 289 | 678 | DNA binding | Fork-head |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000484350 | - | 6 | 16 | 465_555 | 213 | 602 | DNA binding | Fork-head |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000493089 | - | 11 | 21 | 465_555 | 289 | 677 | DNA binding | Fork-head |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000498215 | - | 7 | 17 | 465_555 | 289 | 678 | DNA binding | Fork-head |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318779 | - | 1 | 7 | 348_369 | -159 | 115 | Region | Note=Leucine-zipper |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318779 | - | 1 | 7 | 382_386 | -159 | 115 | Region | CTBP1-binding |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318789 | - | 11 | 21 | 348_369 | 289 | 678 | Region | Note=Leucine-zipper |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318789 | - | 11 | 21 | 382_386 | 289 | 678 | Region | CTBP1-binding |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000475937 | - | 10 | 20 | 348_369 | 289 | 678 | Region | Note=Leucine-zipper |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000475937 | - | 10 | 20 | 382_386 | 289 | 678 | Region | CTBP1-binding |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000484350 | - | 6 | 16 | 348_369 | 213 | 602 | Region | Note=Leucine-zipper |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000484350 | - | 6 | 16 | 382_386 | 213 | 602 | Region | CTBP1-binding |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000493089 | - | 11 | 21 | 348_369 | 289 | 677 | Region | Note=Leucine-zipper |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000493089 | - | 11 | 21 | 382_386 | 289 | 677 | Region | CTBP1-binding |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000498215 | - | 7 | 17 | 348_369 | 289 | 678 | Region | Note=Leucine-zipper |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000498215 | - | 7 | 17 | 382_386 | 289 | 678 | Region | CTBP1-binding |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318779 | - | 1 | 7 | 306_331 | -159 | 115 | Zinc finger | Note=C2H2-type |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000318789 | - | 11 | 21 | 306_331 | 289 | 678 | Zinc finger | Note=C2H2-type |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000475937 | - | 10 | 20 | 306_331 | 289 | 678 | Zinc finger | Note=C2H2-type |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000484350 | - | 6 | 16 | 306_331 | 213 | 602 | Zinc finger | Note=C2H2-type |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000493089 | - | 11 | 21 | 306_331 | 289 | 677 | Zinc finger | Note=C2H2-type |
Hgene | >FOXP1 | chr3:71090479 | chr2:198334794 | ENST00000498215 | - | 7 | 17 | 306_331 | 289 | 678 | Zinc finger | Note=C2H2-type |
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FusionGeneSequence for FOXP1_COQ10B |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_FOXP1_ENST00000318789_chr3_71090479_-_COQ10B_ENST00000263960_chr2_198334794_+_379aa MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRNDKQ PALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLI MNPHASTNGQLSVHTPKRERHLVLMGDFSIIWRLFGVLAQVFLATQELVPWIFQFLLNFDHFYIPSLPHSFLMKLXSRWXLPLKEEHVSC >In-frame_FOXP1_ENST00000318789_chr3_71090479_-_COQ10B_ENST00000409398_chr2_198334794_+_379aa MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRNDKQ PALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLI MNPHASTNGQLSVHTPKRERHLVLMGDFSIIWRLFGVLAQVFLATQELVPWIFQFLLNFDHFYIPSLPHSFLMKLXSRWXLPLKEEHVSC >In-frame_FOXP1_ENST00000493089_chr3_71090479_-_COQ10B_ENST00000263960_chr2_198334794_+_379aa MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRNDKQ PALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLI MNPHASTNGQLSVHTPKRERHLVLMGDFSIIWRLFGVLAQVFLATQELVPWIFQFLLNFDHFYIPSLPHSFLMKLXSRWXLPLKEEHVSC >In-frame_FOXP1_ENST00000493089_chr3_71090479_-_COQ10B_ENST00000409398_chr2_198334794_+_379aa MMQESGTETKSNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRNDKQ PALQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEQQQVATQQLA FQQQLLQMQQLQQQHLLSLQRQGLLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSSSAPSKTSLI MNPHASTNGQLSVHTPKRERHLVLMGDFSIIWRLFGVLAQVFLATQELVPWIFQFLLNFDHFYIPSLPHSFLMKLXSRWXLPLKEEHVSC |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_FOXP1_ENST00000318789_chr3_71090479_-_COQ10B_ENST00000263960_chr2_198334794_+_1139nt ATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGC GGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAG GCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAA CCAGCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTG CTGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAA CAGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCT TTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGG CAGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACT GCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATA ATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATC ATTTGGAGACTATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGAT CACTTCTACATTCCCAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGT >In-frame_FOXP1_ENST00000318789_chr3_71090479_-_COQ10B_ENST00000409398_chr2_198334794_+_1139nt ATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGC GGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAG GCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAA CCAGCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTG CTGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAA CAGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCT TTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGG CAGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACT GCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATA ATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATC ATTTGGAGACTATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGAT CACTTCTACATTCCCAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGT >In-frame_FOXP1_ENST00000493089_chr3_71090479_-_COQ10B_ENST00000263960_chr2_198334794_+_1139nt ATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGC GGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAG GCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAA CCAGCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTG CTGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAA CAGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCT TTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGG CAGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACT GCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATA ATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATC ATTTGGAGACTATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGAT CACTTCTACATTCCCAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGT >In-frame_FOXP1_ENST00000493089_chr3_71090479_-_COQ10B_ENST00000409398_chr2_198334794_+_1139nt ATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGC GGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAG GCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAA CCAGCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTG CTGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAA CAGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCT TTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGG CAGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACT GCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATA ATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATC ATTTGGAGACTATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGAT CACTTCTACATTCCCAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_FOXP1_ENST00000318789_chr3_71090479_-_COQ10B_ENST00000263960_chr2_198334794_+_3049nt GGGGGGTGGGCGCCAGCGCCCCGGCGAACGGCAAAGAGGGAGCCGCTCCCGCTCGGGGGGCCGCTGGAGTGCCCAGCGGGAACCCGAAAG TTTGTAAGAGGAAGAGAGCGCGCGGCGAGCGAGCGAGCGGGCCGGGGGCAGCGGCAGCGGCGCCGGGGACCATGGTGCTGCCGGCGCCTC CTCCGCGGGCGTGAAGGCGGCGCTCCTACTCCCTCCCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGACAATTCCAGTTTCCGAACAA AACATTTCGGCAATGGTGAGGGCTTCGATCCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGGATGTGATGCCTGCTAGCCAAAAGGC TTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTTTTATGGCTGTGAGACACGTTAAAATTT CAGGGGTAAGACGTGACCTTTTGAGGTGACTATAACTGAAGATTGCTTTACAGAAGCCAAAAAAGGTTTTTGAGTCATGATGCAAGAATC TGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGG GCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACTTCAGGTGGC AAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAACCAGCTCTTCAGGT TCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGCTGAGCCCTCAGCA GCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAACAGGAACAGTTGCA GCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCT TTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGCCCTTCC CCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCAC AGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATAATGAACCCACATGC CTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATCATTTGGAGACTATT TGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGATCACTTCTACATTCC CAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGTATGGTCCAGAAACA AATATACCTCGGGAGTTAATGCTTCATGAAGTCCATCACACATAAAGGCAAAAAAGAACTGGTGCCACCTGCTTCTGACTTTAGTTTGTT CACTTTTAGGAAGTATTTTCATGACATGTTTTCAGAAGCCAGAAAGCATTTGTTAAACGCAGCTTTGGTTATAAACCTGCACCATTGAAA ATTTGCACATAGAATATAGACTCACTTGTACATAGAATTATTTCTTCAAGTATAATTCAAAATAATATGGACATTATCATGTTCTGCATT ACAATAATGGGATGTCATCACCATTGCTAGAATACTGGCATGATTCTTCTGAGCAGAAGTTGAAACTGTAAATTTAAACCTTTTAATTAT CACCTTACCTGAAAGAGGTTAGTTAAGATATTCACACAGTATGTATTATATTAACCATATCACACTTAAGTTATTAAATTCAGACTATTT GTAACTTATTGTTATAGGGCCTGCCGTATGGCTTAGGATATTTGAGTAATCATATATTTAAAGTAAAAACTTTGGGCTGGGCACAGTGGC TCACACCTGTAATCCCAGCACTTGGGGAAGCTGAGGTGGGCAGATCAGTTGAGGTCAGGAGTTCTAGACCAGCCTGGTCAACATGGCGAA ACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCACACACCTGTAATCCCAGTTACTTGGGAGGCTGAGGCACAAGAAT CGCTTGAACCCGGGAGGCGGAGGTTGCAGTTAGCCAAGATCGCCCTGCTGCACTCCAGCCTGGGCAACAGAGGGAGACTCTGTCTCCAAA AACAAAAACAAAAACTGTTAGTGAAGGTTCCCTGGGACTTTTGATATTTTAAAAATTGTTCTTATGACTAGTAGATAAATTCATTGCCAT AATGAGGCTAGCTCCCAGATAAACAGTGTATTTTCTTCTTTTTTTTTTTTTTTTTGGTGAGTGGTCCAGAGCTTTAAGCTACTTTTCCAG TAGTTTGCCACTTTCTCCGAGGTAGTTTGGCTGCTCTTTCAGTAATGCTAATTGTGTGTCAAATTTTGTCTACAACAGTAGGCAACAGAT GAAGATAAGTTGGTTGAATGTCTCCAGCACTATGCATCCCTATTTTCTATTTATTGTGTACACTCACTTTCAGTAATGTGTTTCAAACTG GTATTTTTTAAAAAACAAATCAATGTAAGGACTGAAGTTGAAGTAGCAATGTAATAAAGTTAATTTGTTTATTTTTTGTACAGTTAGTTT GGTTATTGAAATCTTCCTATATTGTTTAAATGTGTATTTGCATAGACATAGTAAAGTGTTACAGCATTTCATGTCTTAAAAATATCTATG >In-frame_FOXP1_ENST00000318789_chr3_71090479_-_COQ10B_ENST00000409398_chr2_198334794_+_1909nt GGGGGGTGGGCGCCAGCGCCCCGGCGAACGGCAAAGAGGGAGCCGCTCCCGCTCGGGGGGCCGCTGGAGTGCCCAGCGGGAACCCGAAAG TTTGTAAGAGGAAGAGAGCGCGCGGCGAGCGAGCGAGCGGGCCGGGGGCAGCGGCAGCGGCGCCGGGGACCATGGTGCTGCCGGCGCCTC CTCCGCGGGCGTGAAGGCGGCGCTCCTACTCCCTCCCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGACAATTCCAGTTTCCGAACAA AACATTTCGGCAATGGTGAGGGCTTCGATCCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGGATGTGATGCCTGCTAGCCAAAAGGC TTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTTTTATGGCTGTGAGACACGTTAAAATTT CAGGGGTAAGACGTGACCTTTTGAGGTGACTATAACTGAAGATTGCTTTACAGAAGCCAAAAAAGGTTTTTGAGTCATGATGCAAGAATC TGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGG GCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACTTCAGGTGGC AAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAACCAGCTCTTCAGGT TCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGCTGAGCCCTCAGCA GCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAACAGGAACAGTTGCA GCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCT TTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGCCCTTCC CCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCAC AGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATAATGAACCCACATGC CTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATCATTTGGAGACTATT TGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGATCACTTCTACATTCC CAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGTATGGTCCAGAAACA AATATACCTCGGGAGTTAATGCTTCATGAAGTCCATCACACATAAAGGCAAAAAAGAACTGGTGCCACCTGCTTCTGACTTTAGTTTGTT CACTTTTAGGAAGTATTTTCATGACATGTTTTCAGAAGCCAGAAAGCATTTGTTAAACGCAGCTTTGGTTATAAACCTGCACCATTGAAA ATTTGCACATAGAATATAGACTCACTTGTACATAGAATTATTTCTTCAAGTATAATTCAAAATAATATGGACATTATCATGTTCTGCATT >In-frame_FOXP1_ENST00000493089_chr3_71090479_-_COQ10B_ENST00000263960_chr2_198334794_+_3152nt ATTTATTGTGTGGCGGTTGCACGCTGTACTCGCGGCGGCCCGGCCCTCGCCCGGGAGTGCGTGTGTGCGCGCGTGTGTGCGCGAGTGAGT GTGTGCGCGGGGTGCGCGCGCGGGCGGGAGTGGGCGCGCGCGGGGAAAGGCCCGAAAACACCTTAGTTTGCACCGAGAGACCATTTGCAG CGGAACCCGAAAGTTTGTAAGAGGAAGAGAGCGCGCGGCGAGCGAGCGAGCGGGCCGGGGGCAGCGGCAGCGGCGCCGGGGACCATGGTG CTGCCGGCGCCTCCTCCGCGGGCGTGAAGGCGGCGCTCCTACTCCCTCCCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGACAATTCC AGTTTCCGAACAAAACATTTCGGCAATGGTGAGGGCTTCGATCCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGGATGTGATGCCTG CTAGCCAAAAGGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTTTTATGGCTGTGAGA CACGTTAAAATTTCAGGGGTAAGACGTGACCTTTTGAGGTGACTATAACTGAAGATTGCTTTACAGAAGCCAAAAAAGGTTTTTGAGTCA TGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCG GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGG CACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAAC CAGCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGC TGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAAC AGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTT TTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGGC AGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACTG CAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATAA TGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATCA TTTGGAGACTATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGATC ACTTCTACATTCCCAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGTA TGGTCCAGAAACAAATATACCTCGGGAGTTAATGCTTCATGAAGTCCATCACACATAAAGGCAAAAAAGAACTGGTGCCACCTGCTTCTG ACTTTAGTTTGTTCACTTTTAGGAAGTATTTTCATGACATGTTTTCAGAAGCCAGAAAGCATTTGTTAAACGCAGCTTTGGTTATAAACC TGCACCATTGAAAATTTGCACATAGAATATAGACTCACTTGTACATAGAATTATTTCTTCAAGTATAATTCAAAATAATATGGACATTAT CATGTTCTGCATTACAATAATGGGATGTCATCACCATTGCTAGAATACTGGCATGATTCTTCTGAGCAGAAGTTGAAACTGTAAATTTAA ACCTTTTAATTATCACCTTACCTGAAAGAGGTTAGTTAAGATATTCACACAGTATGTATTATATTAACCATATCACACTTAAGTTATTAA ATTCAGACTATTTGTAACTTATTGTTATAGGGCCTGCCGTATGGCTTAGGATATTTGAGTAATCATATATTTAAAGTAAAAACTTTGGGC TGGGCACAGTGGCTCACACCTGTAATCCCAGCACTTGGGGAAGCTGAGGTGGGCAGATCAGTTGAGGTCAGGAGTTCTAGACCAGCCTGG TCAACATGGCGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCACACACCTGTAATCCCAGTTACTTGGGAGGCT GAGGCACAAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTTAGCCAAGATCGCCCTGCTGCACTCCAGCCTGGGCAACAGAGGGAGA CTCTGTCTCCAAAAACAAAAACAAAAACTGTTAGTGAAGGTTCCCTGGGACTTTTGATATTTTAAAAATTGTTCTTATGACTAGTAGATA AATTCATTGCCATAATGAGGCTAGCTCCCAGATAAACAGTGTATTTTCTTCTTTTTTTTTTTTTTTTTGGTGAGTGGTCCAGAGCTTTAA GCTACTTTTCCAGTAGTTTGCCACTTTCTCCGAGGTAGTTTGGCTGCTCTTTCAGTAATGCTAATTGTGTGTCAAATTTTGTCTACAACA GTAGGCAACAGATGAAGATAAGTTGGTTGAATGTCTCCAGCACTATGCATCCCTATTTTCTATTTATTGTGTACACTCACTTTCAGTAAT GTGTTTCAAACTGGTATTTTTTAAAAAACAAATCAATGTAAGGACTGAAGTTGAAGTAGCAATGTAATAAAGTTAATTTGTTTATTTTTT GTACAGTTAGTTTGGTTATTGAAATCTTCCTATATTGTTTAAATGTGTATTTGCATAGACATAGTAAAGTGTTACAGCATTTCATGTCTT AAAAATATCTATGAAGATATCTAAAATATCTATTTCTATGAAGAAACAGACTTTAACAAATATAAGCAAAATTCAGTTTTCTTTTAACCA >In-frame_FOXP1_ENST00000493089_chr3_71090479_-_COQ10B_ENST00000409398_chr2_198334794_+_2012nt ATTTATTGTGTGGCGGTTGCACGCTGTACTCGCGGCGGCCCGGCCCTCGCCCGGGAGTGCGTGTGTGCGCGCGTGTGTGCGCGAGTGAGT GTGTGCGCGGGGTGCGCGCGCGGGCGGGAGTGGGCGCGCGCGGGGAAAGGCCCGAAAACACCTTAGTTTGCACCGAGAGACCATTTGCAG CGGAACCCGAAAGTTTGTAAGAGGAAGAGAGCGCGCGGCGAGCGAGCGAGCGGGCCGGGGGCAGCGGCAGCGGCGCCGGGGACCATGGTG CTGCCGGCGCCTCCTCCGCGGGCGTGAAGGCGGCGCTCCTACTCCCTCCCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGACAATTCC AGTTTCCGAACAAAACATTTCGGCAATGGTGAGGGCTTCGATCCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGGATGTGATGCCTG CTAGCCAAAAGGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTTTTATGGCTGTGAGA CACGTTAAAATTTCAGGGGTAAGACGTGACCTTTTGAGGTGACTATAACTGAAGATTGCTTTACAGAAGCCAAAAAAGGTTTTTGAGTCA TGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCG GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGG CACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAGGAATGACAAACAAC CAGCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAAGTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGC TGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAAC AGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTT TTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGGC AGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACTG CAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATAA TGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCATCTTGTACTGATGGGAGACTTTTCAATCA TTTGGAGACTATTTGGCGTTTTAGCCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTTGAATTTCGATC ACTTCTACATTCCCAGCTTGCCACACTCTTTTTTGATGAAGTTGTGAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGTAAGCTGTA TGGTCCAGAAACAAATATACCTCGGGAGTTAATGCTTCATGAAGTCCATCACACATAAAGGCAAAAAAGAACTGGTGCCACCTGCTTCTG ACTTTAGTTTGTTCACTTTTAGGAAGTATTTTCATGACATGTTTTCAGAAGCCAGAAAGCATTTGTTAAACGCAGCTTTGGTTATAAACC TGCACCATTGAAAATTTGCACATAGAATATAGACTCACTTGTACATAGAATTATTTCTTCAAGTATAATTCAAAATAATATGGACATTAT |
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FusionGenePPI for FOXP1_COQ10B |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FOXP1 | CTBP1, FOXP1, FOXP2, FOXP4, GATAD2B, MTA1, NCOR2, ELAVL1, MYC, IL3RA, CCDC183, UNK, RCC1, HOXD13, QSER1, SATB1, SATB2, CTBP2, MYH10, LIG3, C10orf2, CUX1, VRK3, XRCC1, CHD1L, RPA2, BLM, MRE11A, MYL12B, TBP, TP53, TTF2, ZBTB10, MYL9, RPA3, TFCP2, TOP2A, UBP1, FOXP3, AURKA, SNRNP70 | COQ10B | ELAVL1, CLPB, CYCS, TIMM8B, BCKDHA, ECH1, PITRM1, POLDIP2, STOML2, CHCHD2, C1QBP |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FOXP1_COQ10B |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FOXP1_COQ10B |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | FOXP1 | C0024232 | Lymphatic Metastasis | 1 | CTD_human |
Hgene | FOXP1 | C0027626 | Neoplasm Invasiveness | 1 | CTD_human |
Hgene | FOXP1 | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
Hgene | FOXP1 | C0042900 | Vitiligo | 1 | CTD_human |
Hgene | FOXP1 | C0279628 | Adenocarcinoma Of Esophagus | 1 | CTD_human |
Hgene | FOXP1 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
Hgene | FOXP1 | C3495559 | Juvenile arthritis | 1 | CTD_human |
Hgene | FOXP1 | C4013764 | MENTAL RETARDATION WITH LANGUAGE IMPAIRMENT AND WITH OR WITHOUT AUTISTIC FEATURES | 1 | CTD_human;ORPHANET;UNIPROT |