|
||||||
|
 | |
| |
| |
| |
| |
|
Fusion gene ID: 12843 |
FusionGeneSummary for FAM65A_EGFR |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: FAM65A_EGFR | Fusion gene ID: 12843 | Hgene | Tgene | Gene symbol | FAM65A | EGFR | Gene ID | 1956 |
| Gene name | epidermal growth factor receptor | ||
| Synonyms | ERBB|ERBB1|HER1|NISBD2|PIG61|mENA | ||
| Cytomap | 7p11.2 | ||
| Type of gene | protein-coding | ||
| Description | epidermal growth factor receptoravian erythroblastic leukemia viral (v-erb-b) oncogene homologcell growth inhibiting protein 40cell proliferation-inducing protein 61epidermal growth factor receptor tyrosine kinase domainerb-b2 receptor tyrosine kinas | ||
| Modification date | 20180527 | ||
| UniProtAcc | P00533 | ||
| Ensembl transtripts involved in fusion gene | ENST00000379312, ENST00000566522, ENST00000042381, ENST00000540839, ENST00000422602, ENST00000428437, | ENST00000455089, ENST00000342916, ENST00000344576, ENST00000420316, ENST00000275493, ENST00000442591, ENST00000463948, ENST00000454757, | |
| Fusion gene scores | * DoF score | 5 X 6 X 3=90 | 9 X 10 X 4=360 |
| # samples | 5 | 11 | |
| ** MAII score | log2(5/90*10)=-0.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/360*10)=-1.71049338280502 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: FAM65A [Title/Abstract] AND EGFR [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |