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Fusion gene ID: 12447 |
FusionGeneSummary for FAIM_SLAIN1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: FAIM_SLAIN1 | Fusion gene ID: 12447 | Hgene | Tgene | Gene symbol | FAIM | SLAIN1 | Gene ID | 55179 | 122060 |
| Gene name | Fas apoptotic inhibitory molecule | SLAIN motif family member 1 | |
| Synonyms | FAIM1 | C13orf32 | |
| Cytomap | 3q22.3 | 13q22.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | fas apoptotic inhibitory molecule 1 | SLAIN motif-containing protein 1 | |
| Modification date | 20180519 | 20180519 | |
| UniProtAcc | Q9NVQ4 | Q8ND83 | |
| Ensembl transtripts involved in fusion gene | ENST00000338446, ENST00000360570, ENST00000393035, ENST00000393034, ENST00000464668, | ENST00000466548, ENST00000418532, ENST00000488699, ENST00000267219, ENST00000351546, ENST00000465831, ENST00000314070, ENST00000358679, | |
| Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 4 X 4 X 2=32 |
| # samples | 1 | 4 | |
| ** MAII score | log2(1/1*10)=3.32192809488736 | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: FAIM [Title/Abstract] AND SLAIN1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | W07321 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 3UTR-3CDS | ENST00000338446 | ENST00000466548 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000338446 | ENST00000418532 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000338446 | ENST00000488699 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000338446 | ENST00000267219 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000338446 | ENST00000351546 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3UTR | ENST00000338446 | ENST00000465831 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000338446 | ENST00000314070 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000338446 | ENST00000358679 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000360570 | ENST00000466548 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000360570 | ENST00000418532 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000360570 | ENST00000488699 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000360570 | ENST00000267219 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000360570 | ENST00000351546 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3UTR | ENST00000360570 | ENST00000465831 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000360570 | ENST00000314070 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000360570 | ENST00000358679 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393035 | ENST00000466548 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393035 | ENST00000418532 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393035 | ENST00000488699 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393035 | ENST00000267219 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393035 | ENST00000351546 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3UTR | ENST00000393035 | ENST00000465831 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000393035 | ENST00000314070 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000393035 | ENST00000358679 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393034 | ENST00000466548 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393034 | ENST00000418532 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393034 | ENST00000488699 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393034 | ENST00000267219 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3CDS | ENST00000393034 | ENST00000351546 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-3UTR | ENST00000393034 | ENST00000465831 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000393034 | ENST00000314070 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| 3UTR-intron | ENST00000393034 | ENST00000358679 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-3CDS | ENST00000464668 | ENST00000466548 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-3CDS | ENST00000464668 | ENST00000418532 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-3CDS | ENST00000464668 | ENST00000488699 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-3CDS | ENST00000464668 | ENST00000267219 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-3CDS | ENST00000464668 | ENST00000351546 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-3UTR | ENST00000464668 | ENST00000465831 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-intron | ENST00000464668 | ENST00000314070 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
| intron-intron | ENST00000464668 | ENST00000358679 | FAIM | chr3 | 138352063 | - | SLAIN1 | chr13 | 78320728 | - |
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FusionProtFeatures for FAIM_SLAIN1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| FAIM | SLAIN1 |