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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for RANBP17 |
 Gene summary |
| Gene information | Gene symbol | RANBP17 | Gene ID | 64901 |
| Gene name | RAN binding protein 17 | |
| Synonyms | - | |
| Cytomap | 5q35.1 | |
| Type of gene | protein-coding | |
| Description | ran-binding protein 17 | |
| Modification date | 20180523 | |
| UniProtAcc | Q9H2T7 | |
| Context | PubMed: RANBP17 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for RANBP17 from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for RANBP17 |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for RANBP17 |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_439548 | 5 | 170319390:170319557:170323053:170323119:170336664:170336769 | 170323053:170323119 | ENSG00000204764.8 | ENST00000519949.1,ENST00000443155.1,ENST00000519256.1,ENST00000519130.1,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439549 | 5 | 170338031:170338138:170341170:170341244:170343468:170343588 | 170341170:170341244 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000520864.1,ENST00000389118.4,ENST00000522533.1,ENST00000522734.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439555 | 5 | 170341170:170341244:170343468:170343588:170345716:170345863 | 170343468:170343588 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000520864.1,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439559 | 5 | 170343468:170343588:170345716:170345863:170346444:170346617 | 170345716:170345863 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000520864.1,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439561 | 5 | 170351360:170351554:170380600:170380706:170395245:170395381 | 170380600:170380706 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000520864.1,ENST00000522380.2,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439562 | 5 | 170395259:170395381:170410068:170410249:170455875:170455993 | 170410068:170410249 | ENSG00000204764.8 | ENST00000522066.1 |
| exon_skip_439563 | 5 | 170395259:170395381:170455875:170455993:170585337:170585498 | 170455875:170455993 | ENSG00000204764.8 | ENST00000519256.1 |
| exon_skip_439564 | 5 | 170395259:170395381:170455875:170455993:170588410:170588470 | 170455875:170455993 | ENSG00000204764.8 | ENST00000519949.1 |
| exon_skip_439565 | 5 | 170395259:170395381:170455875:170455993:170597133:170597207 | 170455875:170455993 | ENSG00000204764.8 | ENST00000520864.1,ENST00000389118.4,ENST00000522533.1 |
| exon_skip_439569 | 5 | 170455875:170455993:170585337:170585498:170588410:170588470 | 170585337:170585498 | ENSG00000204764.8 | ENST00000519256.1 |
| exon_skip_439571 | 5 | 170455875:170455993:170588410:170588470:170597133:170597207 | 170588410:170588470 | ENSG00000204764.8 | ENST00000519949.1 |
| exon_skip_439572 | 5 | 170585337:170585498:170588410:170588470:170597133:170597207 | 170588410:170588470 | ENSG00000204764.8 | ENST00000519256.1 |
| exon_skip_439573 | 5 | 170597133:170597207:170610198:170610234:170610325:170610434 | 170610198:170610234 | ENSG00000204764.8 | ENST00000520586.1 |
| exon_skip_439575 | 5 | 170597133:170597207:170610325:170610434:170626673:170626777 | 170610325:170610434 | ENSG00000204764.8 | ENST00000521759.1,ENST00000523665.1 |
| exon_skip_439577 | 5 | 170610325:170610434:170626673:170626777:170632527:170632583 | 170626673:170626777 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000524364.1,ENST00000520864.1,ENST00000521759.1,ENST00000389118.4,ENST00000520586.1,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1,ENST00000523665.1 |
| exon_skip_439580 | 5 | 170640634:170640742:170648761:170648844:170667931:170668146 | 170648761:170648844 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000521759.1,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439582 | 5 | 170648761:170648844:170667931:170668146:170669685:170669824 | 170667931:170668146 | ENSG00000204764.8 | ENST00000519949.1,ENST00000519256.1,ENST00000521759.1,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439585 | 5 | 170669685:170669824:170692684:170692851:170720886:170720985 | 170692684:170692851 | ENSG00000204764.8 | ENST00000519949.1,ENST00000521759.1,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| exon_skip_439588 | 5 | 170692684:170692851:170711516:170711682:170720886:170720985 | 170711516:170711682 | ENSG00000204764.8 | ENST00000389118.4 |
| exon_skip_439589 | 5 | 170720886:170720985:170722890:170723018:170725765:170725862 | 170722890:170723018 | ENSG00000204764.8 | ENST00000519949.1,ENST00000521759.1,ENST00000389118.4,ENST00000522533.1,ENST00000523189.1,ENST00000522066.1 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for RANBP17 |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_439547 | 5 | 170308842:170308900:170319390:170319557:170336664:170336769 | 170319390:170319557 | ENSG00000204764.8 | ENST00000520864.1 |
| exon_skip_439548 | 5 | 170319390:170319557:170323053:170323119:170336664:170336769 | 170323053:170323119 | ENSG00000204764.8 | ENST00000443155.1,ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000519130.1 |
| exon_skip_439549 | 5 | 170338031:170338138:170341170:170341244:170343468:170343588 | 170341170:170341244 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000520864.1,ENST00000522734.1 |
| exon_skip_439555 | 5 | 170341170:170341244:170343468:170343588:170345716:170345863 | 170343468:170343588 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000520864.1 |
| exon_skip_439556 | 5 | 170341170:170341244:170343468:170343588:170346444:170346617 | 170343468:170343588 | ENSG00000204764.8 | ENST00000522734.1 |
| exon_skip_439559 | 5 | 170343468:170343588:170345716:170345863:170346444:170346617 | 170345716:170345863 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000520864.1 |
| exon_skip_439561 | 5 | 170351360:170351554:170380600:170380706:170395245:170395381 | 170380600:170380706 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000520864.1,ENST00000522380.2 |
| exon_skip_439562 | 5 | 170395259:170395381:170410068:170410249:170455875:170455993 | 170410068:170410249 | ENSG00000204764.8 | ENST00000522066.1 |
| exon_skip_439563 | 5 | 170395259:170395381:170455875:170455993:170585337:170585498 | 170455875:170455993 | ENSG00000204764.8 | ENST00000519256.1 |
| exon_skip_439564 | 5 | 170395259:170395381:170455875:170455993:170588410:170588470 | 170455875:170455993 | ENSG00000204764.8 | ENST00000519949.1 |
| exon_skip_439565 | 5 | 170395259:170395381:170455875:170455993:170597133:170597207 | 170455875:170455993 | ENSG00000204764.8 | ENST00000389118.4,ENST00000522533.1,ENST00000520864.1 |
| exon_skip_439569 | 5 | 170455875:170455993:170585337:170585498:170588410:170588470 | 170585337:170585498 | ENSG00000204764.8 | ENST00000519256.1 |
| exon_skip_439571 | 5 | 170455875:170455993:170588410:170588470:170597133:170597207 | 170588410:170588470 | ENSG00000204764.8 | ENST00000519949.1 |
| exon_skip_439572 | 5 | 170585337:170585498:170588410:170588470:170597133:170597207 | 170588410:170588470 | ENSG00000204764.8 | ENST00000519256.1 |
| exon_skip_439573 | 5 | 170597133:170597207:170610198:170610234:170610325:170610434 | 170610198:170610234 | ENSG00000204764.8 | ENST00000520586.1 |
| exon_skip_439575 | 5 | 170597133:170597207:170610325:170610434:170626673:170626777 | 170610325:170610434 | ENSG00000204764.8 | ENST00000521759.1,ENST00000523665.1 |
| exon_skip_439580 | 5 | 170640634:170640742:170648761:170648844:170667931:170668146 | 170648761:170648844 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000521759.1 |
| exon_skip_439582 | 5 | 170648761:170648844:170667931:170668146:170669685:170669824 | 170667931:170668146 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000519256.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000521759.1 |
| exon_skip_439584 | 5 | 170669685:170669824:170692684:170692851:170711516:170711682 | 170692684:170692851 | ENSG00000204764.8 | ENST00000389118.4 |
| exon_skip_439585 | 5 | 170669685:170669824:170692684:170692851:170720886:170720985 | 170692684:170692851 | ENSG00000204764.8 | ENST00000523189.1,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000521759.1 |
| exon_skip_439588 | 5 | 170692684:170692851:170711516:170711682:170720886:170720985 | 170711516:170711682 | ENSG00000204764.8 | ENST00000389118.4 |
| exon_skip_439589 | 5 | 170720886:170720985:170722890:170723018:170725765:170725862 | 170722890:170723018 | ENSG00000204764.8 | ENST00000523189.1,ENST00000389118.4,ENST00000522533.1,ENST00000522066.1,ENST00000519949.1,ENST00000521759.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for RANBP17 |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000523189 | 170341170 | 170341244 | Frame-shift |
| ENST00000523189 | 170380600 | 170380706 | Frame-shift |
| ENST00000523189 | 170626673 | 170626777 | Frame-shift |
| ENST00000523189 | 170648761 | 170648844 | Frame-shift |
| ENST00000523189 | 170667931 | 170668146 | Frame-shift |
| ENST00000523189 | 170692684 | 170692851 | Frame-shift |
| ENST00000523189 | 170722890 | 170723018 | Frame-shift |
| ENST00000523189 | 170323053 | 170323119 | In-frame |
| ENST00000523189 | 170343468 | 170343588 | In-frame |
| ENST00000523189 | 170345716 | 170345863 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000523189 | 170341170 | 170341244 | Frame-shift |
| ENST00000523189 | 170380600 | 170380706 | Frame-shift |
| ENST00000523189 | 170648761 | 170648844 | Frame-shift |
| ENST00000523189 | 170667931 | 170668146 | Frame-shift |
| ENST00000523189 | 170692684 | 170692851 | Frame-shift |
| ENST00000523189 | 170722890 | 170723018 | Frame-shift |
| ENST00000523189 | 170323053 | 170323119 | In-frame |
| ENST00000523189 | 170343468 | 170343588 | In-frame |
| ENST00000523189 | 170345716 | 170345863 | In-frame |
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Infer the effects of exon skipping event on protein functional features for RANBP17 |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000523189 | 4605 | 1088 | 170323053 | 170323119 | 588 | 653 | 141 | 163 |
| ENST00000523189 | 4605 | 1088 | 170343468 | 170343588 | 999 | 1118 | 278 | 318 |
| ENST00000523189 | 4605 | 1088 | 170345716 | 170345863 | 1119 | 1265 | 318 | 367 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000523189 | 4605 | 1088 | 170323053 | 170323119 | 588 | 653 | 141 | 163 |
| ENST00000523189 | 4605 | 1088 | 170343468 | 170343588 | 999 | 1118 | 278 | 318 |
| ENST00000523189 | 4605 | 1088 | 170345716 | 170345863 | 1119 | 1265 | 318 | 367 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Q9H2T7 | 141 | 163 | 2 | 1088 | Chain | ID=PRO_0000204718;Note=Ran-binding protein 17 |
| Q9H2T7 | 278 | 318 | 2 | 1088 | Chain | ID=PRO_0000204718;Note=Ran-binding protein 17 |
| Q9H2T7 | 318 | 367 | 2 | 1088 | Chain | ID=PRO_0000204718;Note=Ran-binding protein 17 |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Q9H2T7 | 141 | 163 | 2 | 1088 | Chain | ID=PRO_0000204718;Note=Ran-binding protein 17 |
| Q9H2T7 | 278 | 318 | 2 | 1088 | Chain | ID=PRO_0000204718;Note=Ran-binding protein 17 |
| Q9H2T7 | 318 | 367 | 2 | 1088 | Chain | ID=PRO_0000204718;Note=Ran-binding protein 17 |
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SNVs in the skipped exons for RANBP17 |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_439555 | 170343469 | 170343588 | 170343506 | 170343506 | Frame_Shift_Del | G | - | p.R291fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_439555 | 170343469 | 170343588 | 170343564 | 170343564 | Frame_Shift_Del | A | - | p.V310fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_439559 | 170345717 | 170345863 | 170345747 | 170345747 | Frame_Shift_Del | T | - | p.F329fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_439559 | 170345717 | 170345863 | 170345756 | 170345756 | Frame_Shift_Del | T | - | p.F332fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_439561 | 170380601 | 170380706 | 170380653 | 170380653 | Frame_Shift_Del | A | - | p.L507fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_439575 | 170610326 | 170610434 | 170610377 | 170610377 | Frame_Shift_Del | T | - | p.F661fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_439580 | 170648762 | 170648844 | 170648833 | 170648833 | Frame_Shift_Del | T | - | p.V804fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_439585 | 170692685 | 170692851 | 170692755 | 170692755 | Frame_Shift_Del | A | - | p.A949fs |
| ESCA | TCGA-L5-A8NT-01 | exon_skip_439549 | 170341171 | 170341244 | 170341179 | 170341179 | Nonsense_Mutation | G | T | p.E257X |
| SKCM | TCGA-EE-A29E-06 | exon_skip_439559 | 170345717 | 170345863 | 170345783 | 170345783 | Nonsense_Mutation | C | T | p.Q341* |
| SKCM | TCGA-EE-A29E-06 | exon_skip_439559 | 170345717 | 170345863 | 170345783 | 170345783 | Nonsense_Mutation | C | T | p.Q341X |
| LUSC | TCGA-66-2744-01 | exon_skip_439561 | 170380601 | 170380706 | 170380642 | 170380642 | Nonsense_Mutation | G | T | p.G504* |
| BLCA | TCGA-XF-A9T8-01 | exon_skip_439561 | 170380601 | 170380706 | 170380672 | 170380672 | Nonsense_Mutation | G | T | p.E514* |
| READ | TCGA-AG-A002-01 | exon_skip_439577 | 170626674 | 170626777 | 170626766 | 170626766 | Nonsense_Mutation | G | T | p.E711X |
| UCEC | TCGA-BS-A0UF-01 | exon_skip_439580 | 170648762 | 170648844 | 170648817 | 170648817 | Nonsense_Mutation | G | T | p.E799* |
| ACC | TCGA-OR-A5JA-01 | exon_skip_439582 | 170667932 | 170668146 | 170668124 | 170668124 | Nonsense_Mutation | C | A | p.S872* |
| ACC | TCGA-OR-A5JA-01 | exon_skip_439582 | 170667932 | 170668146 | 170668124 | 170668124 | Nonsense_Mutation | C | A | p.S872X |
| LUAD | TCGA-55-6985-01 | exon_skip_439549 | 170341171 | 170341244 | 170341170 | 170341170 | Splice_Site | G | T | p.I254_splice |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| CW2_LARGE_INTESTINE | 170610199 | 170610234 | 170610221 | 170610222 | Frame_Shift_Ins | - | A | p.LK639fs |
| MDAMB415_BREAST | 170323054 | 170323119 | 170323094 | 170323094 | Missense_Mutation | C | T | p.S155F |
| KYSE180_OESOPHAGUS | 170341171 | 170341244 | 170341179 | 170341179 | Missense_Mutation | G | A | p.E257K |
| SNU175_LARGE_INTESTINE | 170341171 | 170341244 | 170341236 | 170341236 | Missense_Mutation | T | C | p.S276P |
| LI7_LIVER | 170343469 | 170343588 | 170343578 | 170343578 | Missense_Mutation | A | C | p.E315A |
| SF172_CENTRAL_NERVOUS_SYSTEM | 170345717 | 170345863 | 170345754 | 170345754 | Missense_Mutation | G | T | p.R331L |
| SNU489_CENTRAL_NERVOUS_SYSTEM | 170345717 | 170345863 | 170345766 | 170345766 | Missense_Mutation | G | A | p.R335H |
| NCIH1781_LUNG | 170345717 | 170345863 | 170345789 | 170345789 | Missense_Mutation | G | A | p.G343R |
| SKMEL24_SKIN | 170345717 | 170345863 | 170345802 | 170345802 | Missense_Mutation | T | C | p.M347T |
| MEWO_SKIN | 170345717 | 170345863 | 170345810 | 170345810 | Missense_Mutation | G | A | p.E350K |
| NCIH1781_LUNG | 170345717 | 170345863 | 170345829 | 170345829 | Missense_Mutation | G | C | p.R356T |
| MEWO_SKIN | 170380601 | 170380706 | 170380606 | 170380606 | Missense_Mutation | C | T | p.L492F |
| MEWO_SKIN | 170380601 | 170380706 | 170380690 | 170380690 | Missense_Mutation | G | A | p.G520R |
| SW684_SOFT_TISSUE | 170610326 | 170610434 | 170610350 | 170610350 | Missense_Mutation | A | G | p.I652V |
| VMRCRCW_KIDNEY | 170610326 | 170610434 | 170610380 | 170610380 | Missense_Mutation | A | T | p.R662W |
| SNU175_LARGE_INTESTINE | 170626674 | 170626777 | 170626773 | 170626773 | Missense_Mutation | T | C | p.V713A |
| BICR18_UPPER_AERODIGESTIVE_TRACT | 170667932 | 170668146 | 170667947 | 170667947 | Missense_Mutation | C | G | p.S813C |
| VMRCRCZ_KIDNEY | 170667932 | 170668146 | 170667983 | 170667983 | Missense_Mutation | T | C | p.M825T |
| MOLT4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 170667932 | 170668146 | 170668102 | 170668102 | Missense_Mutation | G | A | p.A865T |
| ALLPO_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 170667932 | 170668146 | 170668144 | 170668144 | Missense_Mutation | C | G | p.L879V |
| KMS34_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 170692685 | 170692851 | 170692792 | 170692792 | Missense_Mutation | A | G | p.T962A |
| HCC1569_BREAST | 170722891 | 170723018 | 170722994 | 170722994 | Missense_Mutation | A | G | p.N1049S |
| SNU475_LIVER | 170722891 | 170723018 | 170723003 | 170723003 | Missense_Mutation | T | C | p.V1052A |
| JHUEM7_ENDOMETRIUM | 170380601 | 170380706 | 170380693 | 170380693 | Nonsense_Mutation | G | T | p.E521* |
| BCP1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 170667932 | 170668146 | 170667962 | 170667962 | Nonsense_Mutation | C | G | p.S818* |
| JHUEM7_ENDOMETRIUM | 170692685 | 170692851 | 170692777 | 170692777 | Nonsense_Mutation | C | T | p.R957* |
| GP2D_LARGE_INTESTINE | 170626674 | 170626777 | 170626674 | 170626674 | Splice_Site | G | T | p.G680V |
| GP5D_LARGE_INTESTINE | 170626674 | 170626777 | 170626674 | 170626674 | Splice_Site | G | T | p.G680V |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for RANBP17 |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for RANBP17 |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for RANBP17 |
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RelatedDrugs for RANBP17 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RANBP17 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
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