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Center for Computational Systems Medicine
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Gene summary

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Gene structures and expression levels

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Exon skipping events with PSIs in TCGA

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Exon skipping events with PSIs in GTEx

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Open reading frame (ORF) annotation in the exon skipping event

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Exon skipping events in the canonical protein sequence

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SNVs in the skipped exons with depth of coverage

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Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

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Related drugs with this gene

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Related diseases with this gene

Gene summary for ZNF532

check button Gene summary
Gene informationGene symbol

ZNF532

Gene ID

55205

Gene namezinc finger protein 532
Synonyms-
Cytomap

18q21.32

Type of geneprotein-coding
Descriptionzinc finger protein 532
Modification date20180522
UniProtAcc

Q9HCE3

ContextPubMed: ZNF532 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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Exon skipping events across known transcript of Ensembl for ZNF532 from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Gene isoform structures and expression levels for ZNF532

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


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Exon skipping events with PSIs in TCGA for ZNF532

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_2970331856530179:56530398:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000591083.1
exon_skip_2970341856530844:56530918:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000590285.1
exon_skip_2970391856530844:56530918:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000589288.1
exon_skip_2970411856530835:56530982:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000586085.1
exon_skip_2970461856530835:56530982:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000588601.1
exon_skip_2970541856531640:56531761:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000590287.1
exon_skip_2970561856532125:56532218:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000589481.1
exon_skip_2970611856532125:56532218:56532701:56532811:56585502:5658569356532701:56532811ENSG00000074657.9ENST00000592452.1
exon_skip_2970621856532535:56532617:56532701:56532811:56585502:5658569356532701:56532811ENSG00000074657.9ENST00000590285.1,ENST00000591808.1,ENST00000591230.1,ENST00000589481.1,ENST00000336078.4,ENST00000586085.1
exon_skip_2970651856532785:56532811:56563656:56563854:56585502:5658569356563656:56563854ENSG00000074657.9ENST00000587755.1
exon_skip_2970701856532785:56532811:56585502:56587865:56601664:5660181056585502:56587865ENSG00000074657.9ENST00000591083.1,ENST00000589288.1,ENST00000591808.1,ENST00000591230.1,ENST00000336078.4
exon_skip_2970741856587754:56587865:56598877:56598987:56601664:5660181056598877:56598987ENSG00000074657.9ENST00000590157.1
exon_skip_2970771856587754:56587865:56601664:56601846:56606676:5660685356601664:56601846ENSG00000074657.9ENST00000591083.1,ENST00000589288.1,ENST00000591808.1,ENST00000591230.1,ENST00000336078.4
exon_skip_2970891856601664:56601846:56606676:56606853:56615298:5661531356606676:56606853ENSG00000074657.9ENST00000591083.1,ENST00000586158.1,ENST00000589288.1,ENST00000591808.1,ENST00000591230.1,ENST00000336078.4
exon_skip_2970951856606744:56606853:56615298:56615461:56620749:5662103156615298:56615461ENSG00000074657.9ENST00000591083.1,ENST00000589288.1,ENST00000591808.1,ENST00000591230.1,ENST00000336078.4
exon_skip_2970991856615415:56615461:56620749:56621031:56646286:5664638756620749:56621031ENSG00000074657.9ENST00000591083.1,ENST00000589288.1,ENST00000591808.1,ENST00000591230.1,ENST00000336078.4
exon_skip_2971031856620749:56621031:56621465:56621566:56646286:5664638756621465:56621566ENSG00000074657.9ENST00000585662.1
exon_skip_2971091856646286:56646399:56648701:56648849:56651203:5665132656648701:56648849ENSG00000074657.9ENST00000588956.1,ENST00000591083.1,ENST00000589288.1,ENST00000591808.1,ENST00000592249.1,ENST00000591230.1,ENST00000336078.4,ENST00000589131.1

check button PSI values of skipped exons in TCGA.
psi tcga

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Exon skipping events with PSIs in GTEx for ZNF532

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_2970331856530179:56530398:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000591083.1
exon_skip_2970341856530844:56530918:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000590285.1
exon_skip_2970391856530844:56530918:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000589288.1
exon_skip_2970411856530835:56530982:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000586085.1
exon_skip_2970461856530835:56530982:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000588601.1
exon_skip_2970501856531324:56531467:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000591230.1
exon_skip_2970541856531640:56531761:56532701:56532811:56585502:5658572456532701:56532811ENSG00000074657.9ENST00000590287.1
exon_skip_2970561856532125:56532218:56532535:56532617:56532701:5653281156532535:56532617ENSG00000074657.9ENST00000589481.1
exon_skip_2970571856532125:56532218:56532535:56532617:56585502:5658569356532535:56532617ENSG00000074657.9ENST00000588456.1
exon_skip_2970611856532125:56532218:56532701:56532811:56585502:5658569356532701:56532811ENSG00000074657.9ENST00000592452.1
exon_skip_2970621856532535:56532617:56532701:56532811:56585502:5658569356532701:56532811ENSG00000074657.9ENST00000336078.4,ENST00000590285.1,ENST00000586085.1,ENST00000591230.1,ENST00000591808.1,ENST00000589481.1
exon_skip_2970651856532785:56532811:56563656:56563854:56585502:5658569356563656:56563854ENSG00000074657.9ENST00000587755.1
exon_skip_2970701856532785:56532811:56585502:56587865:56601664:5660181056585502:56587865ENSG00000074657.9ENST00000336078.4,ENST00000591083.1,ENST00000589288.1,ENST00000591230.1,ENST00000591808.1
exon_skip_2970741856587754:56587865:56598877:56598987:56601664:5660181056598877:56598987ENSG00000074657.9ENST00000590157.1
exon_skip_2970771856587754:56587865:56601664:56601846:56606676:5660685356601664:56601846ENSG00000074657.9ENST00000336078.4,ENST00000591083.1,ENST00000589288.1,ENST00000591230.1,ENST00000591808.1
exon_skip_2970891856601664:56601846:56606676:56606853:56615298:5661531356606676:56606853ENSG00000074657.9ENST00000336078.4,ENST00000591083.1,ENST00000589288.1,ENST00000591230.1,ENST00000591808.1,ENST00000586158.1
exon_skip_2970951856606744:56606853:56615298:56615461:56620749:5662103156615298:56615461ENSG00000074657.9ENST00000336078.4,ENST00000591083.1,ENST00000589288.1,ENST00000591230.1,ENST00000591808.1
exon_skip_2970991856615415:56615461:56620749:56621031:56646286:5664638756620749:56621031ENSG00000074657.9ENST00000336078.4,ENST00000591083.1,ENST00000589288.1,ENST00000591230.1,ENST00000591808.1
exon_skip_2971031856620749:56621031:56621465:56621566:56646286:5664638756621465:56621566ENSG00000074657.9ENST00000585662.1
exon_skip_2971091856646286:56646399:56648701:56648849:56651203:5665132656648701:56648849ENSG00000074657.9ENST00000336078.4,ENST00000591083.1,ENST00000589288.1,ENST00000591230.1,ENST00000591808.1,ENST00000592249.1,ENST00000589131.1,ENST00000588956.1

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for ZNF532

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST0000033607856585502565878655CDS-5UTR
ENST0000058928856585502565878655CDS-5UTR
ENST0000059108356585502565878655CDS-5UTR
ENST0000059123056585502565878655CDS-5UTR
ENST0000059180856585502565878655CDS-5UTR
ENST0000033607856532701565328115UTR-5UTR
ENST0000058928856532701565328115UTR-5UTR
ENST0000059108356532701565328115UTR-5UTR
ENST0000059123056532701565328115UTR-5UTR
ENST0000059180856532701565328115UTR-5UTR
ENST000003360785660166456601846Frame-shift
ENST000005892885660166456601846Frame-shift
ENST000005910835660166456601846Frame-shift
ENST000005912305660166456601846Frame-shift
ENST000005918085660166456601846Frame-shift
ENST000003360785661529856615461Frame-shift
ENST000005892885661529856615461Frame-shift
ENST000005910835661529856615461Frame-shift
ENST000005912305661529856615461Frame-shift
ENST000005918085661529856615461Frame-shift
ENST000003360785664870156648849Frame-shift
ENST000005892885664870156648849Frame-shift
ENST000005910835664870156648849Frame-shift
ENST000005912305664870156648849Frame-shift
ENST000005918085664870156648849Frame-shift
ENST000003360785660667656606853In-frame
ENST000005892885660667656606853In-frame
ENST000005910835660667656606853In-frame
ENST000005912305660667656606853In-frame
ENST000005918085660667656606853In-frame
ENST000003360785662074956621031In-frame
ENST000005892885662074956621031In-frame
ENST000005910835662074956621031In-frame
ENST000005912305662074956621031In-frame
ENST000005918085662074956621031In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST0000033607856585502565878655CDS-5UTR
ENST0000058928856585502565878655CDS-5UTR
ENST0000059108356585502565878655CDS-5UTR
ENST0000059123056585502565878655CDS-5UTR
ENST0000059180856585502565878655CDS-5UTR
ENST0000059123056532535565326175UTR-5UTR
ENST0000033607856532701565328115UTR-5UTR
ENST0000058928856532701565328115UTR-5UTR
ENST0000059108356532701565328115UTR-5UTR
ENST0000059123056532701565328115UTR-5UTR
ENST0000059180856532701565328115UTR-5UTR
ENST000003360785660166456601846Frame-shift
ENST000005892885660166456601846Frame-shift
ENST000005910835660166456601846Frame-shift
ENST000005912305660166456601846Frame-shift
ENST000005918085660166456601846Frame-shift
ENST000003360785661529856615461Frame-shift
ENST000005892885661529856615461Frame-shift
ENST000005910835661529856615461Frame-shift
ENST000005912305661529856615461Frame-shift
ENST000005918085661529856615461Frame-shift
ENST000003360785664870156648849Frame-shift
ENST000005892885664870156648849Frame-shift
ENST000005910835664870156648849Frame-shift
ENST000005912305664870156648849Frame-shift
ENST000005918085664870156648849Frame-shift
ENST000003360785660667656606853In-frame
ENST000005892885660667656606853In-frame
ENST000005910835660667656606853In-frame
ENST000005912305660667656606853In-frame
ENST000005918085660667656606853In-frame
ENST000003360785662074956621031In-frame
ENST000005892885662074956621031In-frame
ENST000005910835662074956621031In-frame
ENST000005912305662074956621031In-frame
ENST000005918085662074956621031In-frame

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Infer the effects of exon skipping event on protein functional features for ZNF532

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST0000033607867131301566066765660685333053481843901
ENST0000058928856021301566066765660685327302906843901
ENST0000059108353411301566066765660685328753051843901
ENST0000059123044671301566066765660685328833059843901
ENST0000059180851881301566066765660685334183594843901
ENST00000336078671313015662074956621031364539269561050
ENST00000589288560213015662074956621031307033519561050
ENST00000591083534113015662074956621031321534969561050
ENST00000591230446713015662074956621031322335049561050
ENST00000591808518813015662074956621031375840399561050

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST0000033607867131301566066765660685333053481843901
ENST0000058928856021301566066765660685327302906843901
ENST0000059108353411301566066765660685328753051843901
ENST0000059123044671301566066765660685328833059843901
ENST0000059180851881301566066765660685334183594843901
ENST00000336078671313015662074956621031364539269561050
ENST00000589288560213015662074956621031307033519561050
ENST00000591083534113015662074956621031321534969561050
ENST00000591230446713015662074956621031322335049561050
ENST00000591808518813015662074956621031375840399561050

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE384390111301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901842865Zinc fingerNote=C2H2-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3843901870893Zinc fingerNote=C2H2-type 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE3956105011301ChainID=PRO_0000299552;Note=Zinc finger protein 532
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050980980Cross-linkNote=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050972972Sequence conflictNote=G->S;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE39561050936959Zinc fingerNote=C2H2-type 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042
Q9HCE3956105010251048Zinc fingerNote=C2H2-type 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00042


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SNVs in the skipped exons for ZNF532

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.
ZNF532_LGG_exon_skip_297109_psi_boxplot.png
boxplot
ZNF532_LIHC_exon_skip_297109_psi_boxplot.png
boxplot

check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
LIHCTCGA-DD-A1EG-01exon_skip_297070
56585503565878655658567156585671Frame_Shift_DelC-p.S51fs
LIHCTCGA-DD-A39Y-01exon_skip_297070
56585503565878655658596356585963Frame_Shift_DelC-p.D148fs
LIHCTCGA-DD-A3A0-01exon_skip_297070
56585503565878655658668656586686Frame_Shift_DelA-p.G389fs
LIHCTCGA-DD-A1EG-01exon_skip_297070
56585503565878655658677456586774Frame_Shift_DelC-p.P420fs
LIHCTCGA-DD-A1EG-01exon_skip_297070
56585503565878655658720656587206Frame_Shift_DelC-p.P564fs
LIHCTCGA-DD-A3A0-01exon_skip_297070
56585503565878655658720656587206Frame_Shift_DelC-p.P564fs
LIHCTCGA-DD-A39Y-01exon_skip_297070
56585503565878655658738356587383Frame_Shift_DelG-p.G622fs
LIHCTCGA-DD-A39Y-01exon_skip_297070
56585503565878655658750756587507Frame_Shift_DelC-p.S663fs
BRCATCGA-A2-A0YH-01exon_skip_297070
56585503565878655658781156587811Frame_Shift_DelG-p.D765fs
LGGTCGA-DU-6392-01exon_skip_297109
56648702566488495664882456648824Frame_Shift_DelA-p.E1129fs
LIHCTCGA-DD-A1EG-01exon_skip_297109
56648702566488495664883056648830Frame_Shift_DelA-p.E1131fs
UCECTCGA-A5-A0GA-01exon_skip_297070
56585503565878655658596256585963Frame_Shift_Ins-Cp.D148fs
UCECTCGA-AP-A0LM-01exon_skip_297070
56585503565878655658598556585985Nonsense_MutationCTp.R156*
STADTCGA-VQ-AA6B-01exon_skip_297070
56585503565878655658598956585989Nonsense_MutationCGp.S157*
STADTCGA-VQ-AA6B-01exon_skip_297070
56585503565878655658598956585989Nonsense_MutationCGp.S157X
GBMTCGA-16-1048-01exon_skip_297070
56585503565878655658737756587377Nonsense_MutationGTp.E620*
UCECTCGA-BK-A0C9-01exon_skip_297070
56585503565878655658767756587677Nonsense_MutationCTp.Q720*
SKCMTCGA-WE-AAA0-06exon_skip_297077
56601665566018465660173456601734Nonsense_MutationCTp.Q806*
COADTCGA-AA-3510-01exon_skip_297089
56606677566068535660684656606846Nonsense_MutationGTp.E900X
SKCMTCGA-W3-A828-06exon_skip_297099
56620750566210315662085556620855Nonsense_MutationGTp.E992*
COADTCGA-AA-3510-01exon_skip_297109
56648702566488495664879656648796Nonsense_MutationGTp.E1120X
LUADTCGA-49-6742-01exon_skip_297109
56648702566488495664881756648817Nonsense_MutationGTp.E1127*

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description
ZNF532_56646286_56646399_56648701_56648849_56651203_56651326_TCGA-DU-6392-01Sample: TCGA-DU-6392-01
Cancer type: LGG
ESID: exon_skip_297109
Skipped exon start: 56648702
Skipped exon end: 56648849
Mutation start: 56648824
Mutation end: 56648824
Mutation type: Frame_Shift_Del
Reference seq: A
Mutation seq: -
AAchange: p.E1129fs
exon_skip_106946_LGG_TCGA-DU-6392-01.png
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exon_skip_114879_LGG_TCGA-DU-6392-01.png
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exon_skip_120606_LGG_TCGA-DU-6392-01.png
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exon_skip_130417_LGG_TCGA-DU-6392-01.png
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exon_skip_138304_LGG_TCGA-DU-6392-01.png
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exon_skip_143841_LGG_TCGA-DU-6392-01.png
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exon_skip_143843_LGG_TCGA-DU-6392-01.png
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exon_skip_145922_LGG_TCGA-DU-6392-01.png
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exon_skip_155098_LGG_TCGA-DU-6392-01.png
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exon_skip_26359_LGG_TCGA-DU-6392-01.png
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exon_skip_290929_LGG_TCGA-DU-6392-01.png
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exon_skip_297109_LGG_TCGA-DU-6392-01.png
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exon_skip_33957_LGG_TCGA-DU-6392-01.png
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exon_skip_343170_LGG_TCGA-DU-6392-01.png
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exon_skip_354191_LGG_TCGA-DU-6392-01.png
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exon_skip_367235_LGG_TCGA-DU-6392-01.png
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exon_skip_423495_LGG_TCGA-DU-6392-01.png
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exon_skip_423582_LGG_TCGA-DU-6392-01.png
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exon_skip_430528_LGG_TCGA-DU-6392-01.png
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exon_skip_432953_LGG_TCGA-DU-6392-01.png
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exon_skip_436589_LGG_TCGA-DU-6392-01.png
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exon_skip_438105_LGG_TCGA-DU-6392-01.png
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exon_skip_438310_LGG_TCGA-DU-6392-01.png
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exon_skip_442085_LGG_TCGA-DU-6392-01.png
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exon_skip_481046_LGG_TCGA-DU-6392-01.png
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exon_skip_484517_LGG_TCGA-DU-6392-01.png
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exon_skip_502736_LGG_TCGA-DU-6392-01.png
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exon_skip_512614_LGG_TCGA-DU-6392-01.png
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exon_skip_7508_LGG_TCGA-DU-6392-01.png
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exon_skip_7509_LGG_TCGA-DU-6392-01.png
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exon_skip_79467_LGG_TCGA-DU-6392-01.png
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exon_skip_85050_LGG_TCGA-DU-6392-01.png
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exon_skip_95050_LGG_TCGA-DU-6392-01.png
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exon_skip_95053_LGG_TCGA-DU-6392-01.png
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check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
COLO684_ENDOMETRIUM56585503565878655658748056587480Frame_Shift_DelT-p.V654fs
P30OHK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658748056587480Frame_Shift_DelT-p.V654fs
HEC59_ENDOMETRIUM56585503565878655658747956587480Frame_Shift_Ins-Tp.V654fs
LIM1215_LARGE_INTESTINE56585503565878655658747956587480Frame_Shift_Ins-Tp.V654fs
NCIH630_LARGE_INTESTINE56585503565878655658747956587480Frame_Shift_Ins-Tp.V654fs
CAOV3_OVARY56585503565878655658747956587480Frame_Shift_Ins-Tp.V654fs
SNUC4_LARGE_INTESTINE56648702566488495664881356648814Frame_Shift_Ins-Ap.N1126fs
HCC56_LARGE_INTESTINE56585503565878655658587556585880In_Frame_DelTGACAC-p.TL120del
MERO25_LUNG56585503565878655658562256585623In_Frame_Ins-ATGACCp.37_38insDH
JHUEM7_ENDOMETRIUM56585503565878655658555056585550Missense_MutationTGp.F11V
SNU1040_LARGE_INTESTINE56585503565878655658565856585658Missense_MutationGAp.G47R
DV90_LUNG56585503565878655658567656585676Missense_MutationGAp.A53T
SNU175_LARGE_INTESTINE56585503565878655658570656585706Missense_MutationGAp.V63I
MOLT4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658578956585789Missense_MutationTAp.H90Q
SW948_LARGE_INTESTINE56585503565878655658585656585856Missense_MutationGTp.D113Y
NCIH1385_LUNG56585503565878655658588656585886Missense_MutationGTp.D123Y
HEC1A_ENDOMETRIUM56585503565878655658594056585940Missense_MutationGAp.D141N
BDCM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658601056586010Missense_MutationTCp.L164S
CHLA258_BONE56585503565878655658603956586039Missense_MutationGAp.D174N
SNUC4_LARGE_INTESTINE56585503565878655658610356586103Missense_MutationTCp.V195A
HEC251_ENDOMETRIUM56585503565878655658614556586145Missense_MutationCAp.S209Y
HAL01_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658617756586177Missense_MutationGAp.V220I
ISHIKAWAHERAKLIO02ER_ENDOMETRIUM56585503565878655658628056586280Missense_MutationCAp.P254H
SIHA_CERVIX56585503565878655658633456586334Missense_MutationCTp.A272V
HS578T_BREAST56585503565878655658634256586342Missense_MutationGAp.A275T
KMOE2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658636456586364Missense_MutationCTp.A282V
RH30_SOFT_TISSUE56585503565878655658637456586374Missense_MutationCGp.D285E
SJRH30_SOFT_TISSUE56585503565878655658637456586374Missense_MutationCGp.D285E
COLO792_SKIN56585503565878655658640056586400Missense_MutationCTp.S294L
JHUEM7_ENDOMETRIUM56585503565878655658659956586599Missense_MutationACp.K360N
MN60_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658660356586603Missense_MutationCTp.R362C
U251MG_CENTRAL_NERVOUS_SYSTEM56585503565878655658661556586615Missense_MutationAGp.I366V
MOLP8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658676256586762Missense_MutationGAp.V415I
SLR21_KIDNEY56585503565878655658677856586778Missense_MutationCGp.P420R
SLR23_KIDNEY56585503565878655658677856586778Missense_MutationCGp.P420R
SNGM_ENDOMETRIUM56585503565878655658679956586799Missense_MutationCTp.A427V
SNU1040_LARGE_INTESTINE56585503565878655658690056586900Missense_MutationGAp.A461T
NUGC3_STOMACH56585503565878655658709256587092Missense_MutationGAp.A525T
SKNMC_BONE56585503565878655658725756587257Missense_MutationGAp.V580M
MCIXC_AUTONOMIC_GANGLIA56585503565878655658725756587257Missense_MutationGAp.V580M
BT474_BREAST56585503565878655658731156587311Missense_MutationAGp.I598V
HEC1A_ENDOMETRIUM56585503565878655658734856587348Missense_MutationCTp.T610M
SW1783_CENTRAL_NERVOUS_SYSTEM56585503565878655658734856587348Missense_MutationCTp.T610M
HEC1_ENDOMETRIUM56585503565878655658734856587348Missense_MutationCTp.T610M
HEC1B_ENDOMETRIUM56585503565878655658734856587348Missense_MutationCTp.T610M
LNCAPCLONEFGC_PROSTATE56585503565878655658736056587360Missense_MutationGAp.R614H
NCIH650_LUNG56585503565878655658751856587518Missense_MutationGAp.G667R
HEC1_ENDOMETRIUM56585503565878655658755456587554Missense_MutationCTp.H679Y
IGROV1_OVARY56585503565878655658757956587579Missense_MutationCTp.A687V
NB5_AUTONOMIC_GANGLIA56585503565878655658775656587756Missense_MutationCAp.P746H
HOP92_LUNG56585503565878655658781856587818Missense_MutationATp.T767S
PCM6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56585503565878655658784556587845Missense_MutationGTp.A776S
HEC151_ENDOMETRIUM56585503565878655658784656587846Missense_MutationCTp.A776V
BICR18_UPPER_AERODIGESTIVE_TRACT56601665566018465660167756601677Missense_MutationAGp.I787V
DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56601665566018465660167756601677Missense_MutationAGp.I787V
SISO_CERVIX56601665566018465660174456601744Missense_MutationCTp.S809F
GRST_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56601665566018465660174456601744Missense_MutationCTp.S809F
HCC1954_BREAST56601665566018465660178356601783Missense_MutationCTp.S822L
DV90_LUNG56601665566018465660182456601824Missense_MutationTCp.Y836H
OC316_OVARY56606677566068535660676256606762Missense_MutationTCp.C872R
OC314_OVARY56606677566068535660676256606762Missense_MutationTCp.C872R
IGR1_SKIN56606677566068535660676656606766Missense_MutationCTp.P873L
LNCAPCLONEFGC_PROSTATE56606677566068535660683256606832Missense_MutationGCp.G895A
BICR18_UPPER_AERODIGESTIVE_TRACT56606677566068535660683456606834Missense_MutationAGp.I896V
DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56606677566068535660683456606834Missense_MutationAGp.I896V
TTC549_SOFT_TISSUE56615299566154615661536156615361Missense_MutationAGp.H923R
BICR18_UPPER_AERODIGESTIVE_TRACT56615299566154615661537656615376Missense_MutationTCp.I928T
BICR18_UPPER_AERODIGESTIVE_TRACT56615299566154615661538056615380Missense_MutationACp.E929D
DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56615299566154615661538056615380Missense_MutationACp.E929D
KARPAS45_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE56615299566154615661539056615390Missense_MutationGAp.V933M
SNU620_STOMACH56615299566154615661541856615418Missense_MutationCGp.S942C
BICR18_UPPER_AERODIGESTIVE_TRACT56620750566210315662081656620816Missense_MutationAGp.I979V
SNU81_LARGE_INTESTINE56620750566210315662086456620864Missense_MutationACp.K995Q
HCC2998_LARGE_INTESTINE56620750566210315662087256620872Missense_MutationGTp.M997I
HT115_LARGE_INTESTINE56620750566210315662089656620896Missense_MutationGTp.K1005N
TASK1_CENTRAL_NERVOUS_SYSTEM56620750566210315662092556620925Missense_MutationTCp.M1015T
SQ1_LUNG56648702566488495664880056648800Missense_MutationTCp.M1121T
HCT15_LARGE_INTESTINE56585503565878655658598556585985Nonsense_MutationCTp.R156*
CHLA258_BONE56585503565878655658720156587201Nonsense_MutationCAp.S561*
RCCFG2_KIDNEY56606677566068535660667756606677Splice_SiteATp.R843R

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for ZNF532

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for ZNF532


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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for ZNF532


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RelatedDrugs for ZNF532

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZNF532

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource