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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for NIN |
 Gene summary |
| Gene information | Gene symbol | NIN | Gene ID | 51199 |
| Gene name | ninein | |
| Synonyms | SCKL7 | |
| Cytomap | 14q22.1 | |
| Type of gene | protein-coding | |
| Description | nineinglycogen synthase kinase 3 beta-interacting proteinhNineinninein (GSK3B interacting protein)ninein centrosomal protein | |
| Modification date | 20180523 | |
| UniProtAcc | Q8N4C6 | |
| Context | PubMed: NIN [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for NIN from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for NIN |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for NIN |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_113227 | 14 | 51192670:51192784:51196240:51196441:51202233:51202335 | 51196240:51196441 | ENSG00000100503.19 | ENST00000382041.3,ENST00000530997.2,ENST00000245441.5,ENST00000382043.4,ENST00000389869.3 |
| exon_skip_113229 | 14 | 51196240:51196441:51197640:51197701:51202233:51202335 | 51197640:51197701 | ENSG00000100503.19 | ENST00000389868.3,ENST00000476352.1,ENST00000324330.9,ENST00000485005.1 |
| exon_skip_113232 | 14 | 51206089:51206205:51208299:51208446:51210133:51210247 | 51208299:51208446 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000382043.4,ENST00000389869.3 |
| exon_skip_113238 | 14 | 51210133:51210247:51210960:51211083:51214709:51214823 | 51210960:51211083 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000382043.4,ENST00000389869.3 |
| exon_skip_113239 | 14 | 51214709:51214823:51219235:51219451:51221280:51221350 | 51219235:51219451 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000382043.4,ENST00000389869.3 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENSG00000100503.19 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 |
| exon_skip_113243 | 14 | 51221459:51221585:51226574:51227077:51228507:51228629 | 51226574:51227077 | ENSG00000100503.19 | ENST00000389868.3,ENST00000382043.4 |
| exon_skip_113245 | 14 | 51230543:51230682:51233024:51233114:51233497:51233513 | 51233024:51233114 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000382043.4,ENST00000389869.3 |
| exon_skip_113246 | 14 | 51238049:51238186:51239018:51239186:51239666:51239716 | 51239018:51239186 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000324330.9,ENST00000245441.5,ENST00000453401.2,ENST00000382043.4 |
| exon_skip_113247 | 14 | 51258767:51258979:51259177:51259231:51259429:51259599 | 51259177:51259231 | ENSG00000100503.19 | ENST00000486950.1 |
| exon_skip_113252 | 14 | 51273454:51273536:51288591:51288718:51297181:51297197 | 51288591:51288718 | ENSG00000100503.19 | ENST00000453401.2 |
| exon_skip_113253 | 14 | 51273454:51273536:51288591:51288795:51297181:51297197 | 51288591:51288795 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000496749.1,ENST00000476352.1,ENST00000324330.9,ENST00000245441.5,ENST00000463419.1,ENST00000382043.4 |
| exon_skip_113254 | 14 | 51288591:51288795:51297181:51297235:51297723:51297764 | 51297181:51297235 | ENSG00000100503.19 | ENST00000389868.3,ENST00000453196.1,ENST00000382041.3,ENST00000476352.1,ENST00000324330.9 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for NIN |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_113227 | 14 | 51192670:51192784:51196240:51196441:51202233:51202335 | 51196240:51196441 | ENSG00000100503.19 | ENST00000245441.5,ENST00000530997.2,ENST00000382043.4,ENST00000389869.3,ENST00000382041.3 |
| exon_skip_113229 | 14 | 51196240:51196441:51197640:51197701:51202233:51202335 | 51197640:51197701 | ENSG00000100503.19 | ENST00000389868.3,ENST00000476352.1,ENST00000324330.9,ENST00000485005.1 |
| exon_skip_113232 | 14 | 51206089:51206205:51208299:51208446:51210133:51210247 | 51208299:51208446 | ENSG00000100503.19 | ENST00000245441.5,ENST00000389868.3,ENST00000476352.1,ENST00000530997.2,ENST00000382043.4,ENST00000389869.3,ENST00000382041.3,ENST00000324330.9,ENST00000530853.1,ENST00000453196.1 |
| exon_skip_113238 | 14 | 51210133:51210247:51210960:51211083:51214709:51214823 | 51210960:51211083 | ENSG00000100503.19 | ENST00000245441.5,ENST00000389868.3,ENST00000476352.1,ENST00000530997.2,ENST00000382043.4,ENST00000389869.3,ENST00000382041.3,ENST00000324330.9,ENST00000530853.1,ENST00000453196.1 |
| exon_skip_113239 | 14 | 51214709:51214823:51219235:51219451:51221280:51221350 | 51219235:51219451 | ENSG00000100503.19 | ENST00000245441.5,ENST00000389868.3,ENST00000476352.1,ENST00000530997.2,ENST00000382043.4,ENST00000389869.3,ENST00000382041.3,ENST00000324330.9,ENST00000530853.1,ENST00000453196.1 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENSG00000100503.19 | ENST00000245441.5,ENST00000476352.1,ENST00000530997.2,ENST00000389869.3,ENST00000382041.3,ENST00000324330.9,ENST00000530853.1,ENST00000453196.1 |
| exon_skip_113243 | 14 | 51221459:51221585:51226574:51227077:51228507:51228629 | 51226574:51227077 | ENSG00000100503.19 | ENST00000389868.3,ENST00000382043.4 |
| exon_skip_113245 | 14 | 51230543:51230682:51233024:51233114:51233497:51233513 | 51233024:51233114 | ENSG00000100503.19 | ENST00000245441.5,ENST00000389868.3,ENST00000476352.1,ENST00000530997.2,ENST00000382043.4,ENST00000389869.3,ENST00000382041.3,ENST00000324330.9,ENST00000530853.1,ENST00000453196.1 |
| exon_skip_113246 | 14 | 51238049:51238186:51239018:51239186:51239666:51239716 | 51239018:51239186 | ENSG00000100503.19 | ENST00000245441.5,ENST00000389868.3,ENST00000476352.1,ENST00000530997.2,ENST00000382043.4,ENST00000382041.3,ENST00000324330.9,ENST00000453196.1,ENST00000453401.2 |
| exon_skip_113247 | 14 | 51258767:51258979:51259177:51259231:51259429:51259599 | 51259177:51259231 | ENSG00000100503.19 | ENST00000486950.1 |
| exon_skip_113252 | 14 | 51273454:51273536:51288591:51288718:51297181:51297197 | 51288591:51288718 | ENSG00000100503.19 | ENST00000453401.2 |
| exon_skip_113253 | 14 | 51273454:51273536:51288591:51288795:51297181:51297197 | 51288591:51288795 | ENSG00000100503.19 | ENST00000245441.5,ENST00000389868.3,ENST00000476352.1,ENST00000382043.4,ENST00000382041.3,ENST00000324330.9,ENST00000453196.1,ENST00000496749.1,ENST00000463419.1 |
| exon_skip_113254 | 14 | 51288591:51288795:51297181:51297235:51297723:51297764 | 51297181:51297235 | ENSG00000100503.19 | ENST00000389868.3,ENST00000476352.1,ENST00000382041.3,ENST00000324330.9,ENST00000453196.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for NIN |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000382041 | 51288591 | 51288795 | 3UTR-3CDS |
| ENST00000382041 | 51297181 | 51297235 | 3UTR-3UTR |
| ENST00000382041 | 51196240 | 51196441 | In-frame |
| ENST00000382041 | 51208299 | 51208446 | In-frame |
| ENST00000382041 | 51210960 | 51211083 | In-frame |
| ENST00000382041 | 51219235 | 51219451 | In-frame |
| ENST00000382041 | 51223209 | 51225348 | In-frame |
| ENST00000382041 | 51233024 | 51233114 | In-frame |
| ENST00000382041 | 51239018 | 51239186 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000382041 | 51288591 | 51288795 | 3UTR-3CDS |
| ENST00000382041 | 51297181 | 51297235 | 3UTR-3UTR |
| ENST00000382041 | 51196240 | 51196441 | In-frame |
| ENST00000382041 | 51208299 | 51208446 | In-frame |
| ENST00000382041 | 51210960 | 51211083 | In-frame |
| ENST00000382041 | 51219235 | 51219451 | In-frame |
| ENST00000382041 | 51223209 | 51225348 | In-frame |
| ENST00000382041 | 51233024 | 51233114 | In-frame |
| ENST00000382041 | 51239018 | 51239186 | In-frame |
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Infer the effects of exon skipping event on protein functional features for NIN |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000382041 | 6513 | 2090 | 51239018 | 51239186 | 1005 | 1172 | 271 | 327 |
| ENST00000382041 | 6513 | 2090 | 51233024 | 51233114 | 1737 | 1826 | 515 | 545 |
| ENST00000382041 | 6513 | 2090 | 51223209 | 51225348 | 2591 | 4729 | 800 | 1512 |
| ENST00000382041 | 6513 | 2090 | 51219235 | 51219451 | 4926 | 5141 | 1578 | 1650 |
| ENST00000382041 | 6513 | 2090 | 51210960 | 51211083 | 5256 | 5378 | 1688 | 1729 |
| ENST00000382041 | 6513 | 2090 | 51208299 | 51208446 | 5493 | 5639 | 1767 | 1816 |
| ENST00000382041 | 6513 | 2090 | 51196240 | 51196441 | 6069 | 6269 | 1959 | 2026 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000382041 | 6513 | 2090 | 51239018 | 51239186 | 1005 | 1172 | 271 | 327 |
| ENST00000382041 | 6513 | 2090 | 51233024 | 51233114 | 1737 | 1826 | 515 | 545 |
| ENST00000382041 | 6513 | 2090 | 51223209 | 51225348 | 2591 | 4729 | 800 | 1512 |
| ENST00000382041 | 6513 | 2090 | 51219235 | 51219451 | 4926 | 5141 | 1578 | 1650 |
| ENST00000382041 | 6513 | 2090 | 51210960 | 51211083 | 5256 | 5378 | 1688 | 1729 |
| ENST00000382041 | 6513 | 2090 | 51208299 | 51208446 | 5493 | 5639 | 1767 | 1816 |
| ENST00000382041 | 6513 | 2090 | 51196240 | 51196441 | 6069 | 6269 | 1959 | 2026 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
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SNVs in the skipped exons for NIN |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
NIN_BRCA_exon_skip_113241_psi_boxplot.png |
NIN_COAD_exon_skip_113241_psi_boxplot.png |
NIN_LGG_exon_skip_113241_psi_boxplot.png |
NIN_LIHC_exon_skip_113241_psi_boxplot.png |
NIN_PAAD_exon_skip_113241_psi_boxplot.png |
NIN_SKCM_exon_skip_113241_psi_boxplot.png |
NIN_STAD_exon_skip_113241_psi_boxplot.png |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-G3-A3CJ-01 | 51208300 | 51208446 | 51208348 | 51208348 | Frame_Shift_Del | T | - | p.K1800fs | |
| SKCM | TCGA-EE-A3AA-06 | exon_skip_113238 | 51210961 | 51211083 | 51210980 | 51210980 | Frame_Shift_Del | A | - | p.L1723fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_113238 | 51210961 | 51211083 | 51211044 | 51211044 | Frame_Shift_Del | T | - | p.I1702fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_113239 | 51219236 | 51219451 | 51219368 | 51219368 | Frame_Shift_Del | T | - | p.K1606fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_113239 | 51219236 | 51219451 | 51219378 | 51219378 | Frame_Shift_Del | T | - | p.N1603fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_113241 | 51223210 | 51225348 | 51223484 | 51223484 | Frame_Shift_Del | T | - | p.R1422fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_113241 | 51223210 | 51225348 | 51223533 | 51223533 | Frame_Shift_Del | T | - | p.K1405fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51223539 | 51223539 | Frame_Shift_Del | T | - | p.K1403fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51223864 | 51223864 | Frame_Shift_Del | T | - | p.K1296fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51223972 | 51223972 | Frame_Shift_Del | T | - | p.N1259fs |
| LGG | TCGA-DU-6392-01 | exon_skip_113241 | 51223210 | 51225348 | 51224050 | 51224050 | Frame_Shift_Del | T | - | p.K1234fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51224050 | 51224050 | Frame_Shift_Del | T | - | p.K1234fs |
| COAD | TCGA-A6-6781-01 | exon_skip_113241 | 51223210 | 51225348 | 51225062 | 51225065 | Frame_Shift_Del | TCTC | - | p.895_896del |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_113241 | 51223210 | 51225348 | 51225074 | 51225074 | Frame_Shift_Del | G | - | p.Q892fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51225335 | 51225335 | Frame_Shift_Del | T | - | p.T805fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_113243 | 51226575 | 51227077 | 51226868 | 51226868 | Frame_Shift_Del | T | - | p.K702fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_113245 | 51233025 | 51233114 | 51233043 | 51233043 | Frame_Shift_Del | T | - | p.E539fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_113252 | 51288592 | 51288718 | 51288635 | 51288635 | Frame_Shift_Del | G | - | p.P47fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_113253 | 51288592 | 51288795 | 51288635 | 51288635 | Frame_Shift_Del | G | - | p.P47fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_113241 | 51223210 | 51225348 | 51223418 | 51223419 | Frame_Shift_Ins | - | T | p.F1444fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_113246 | 51239019 | 51239186 | 51239123 | 51239124 | Frame_Shift_Ins | - | A | p.L292fs |
| SKCM | TCGA-BF-A1PV-01 | exon_skip_113227 | 51196241 | 51196441 | 51196294 | 51196294 | Nonsense_Mutation | G | A | p.Q2009* |
| SKCM | TCGA-BF-A1PV-01 | exon_skip_113227 | 51196241 | 51196441 | 51196294 | 51196294 | Nonsense_Mutation | G | A | p.Q2009X |
| STAD | TCGA-BR-4201-01 | 51208300 | 51208446 | 51208344 | 51208344 | Nonsense_Mutation | C | A | p.E1802* | |
| MESO | TCGA-YS-A95B-01 | exon_skip_113239 | 51219236 | 51219451 | 51219329 | 51219329 | Nonsense_Mutation | G | T | p.C1619* |
| LUSC | TCGA-46-3769-01 | exon_skip_113239 | 51219236 | 51219451 | 51219373 | 51219373 | Nonsense_Mutation | C | A | p.E1605* |
| READ | TCGA-F5-6814-01 | exon_skip_113239 | 51219236 | 51219451 | 51219403 | 51219403 | Nonsense_Mutation | C | A | p.E1595X |
| SKCM | TCGA-D3-A8GI-06 | exon_skip_113239 | 51219236 | 51219451 | 51219427 | 51219427 | Nonsense_Mutation | G | A | p.Q1587* |
| BRCA | TCGA-A8-A06Q-01 | exon_skip_113241 | 51223210 | 51225348 | 51223742 | 51223742 | Nonsense_Mutation | G | A | p.Q1336* |
| LUAD | TCGA-55-A48Y-01 | exon_skip_113241 | 51223210 | 51225348 | 51223742 | 51223742 | Nonsense_Mutation | G | A | p.Q1336* |
| UCEC | TCGA-D1-A103-01 | exon_skip_113241 | 51223210 | 51225348 | 51223976 | 51223976 | Nonsense_Mutation | C | A | p.E1258* |
| SKCM | TCGA-EE-A20F-06 | exon_skip_113241 | 51223210 | 51225348 | 51224102 | 51224102 | Nonsense_Mutation | G | A | p.R1216* |
| SKCM | TCGA-EE-A20F-06 | exon_skip_113241 | 51223210 | 51225348 | 51224102 | 51224102 | Nonsense_Mutation | G | A | p.R1216X |
| PAAD | TCGA-IB-7651-01 | exon_skip_113241 | 51223210 | 51225348 | 51224357 | 51224357 | Nonsense_Mutation | G | A | p.R1131* |
| PAAD | TCGA-IB-7651-01 | exon_skip_113241 | 51223210 | 51225348 | 51224357 | 51224357 | Nonsense_Mutation | G | A | p.R1131X |
| STAD | TCGA-IN-A6RR-01 | exon_skip_113241 | 51223210 | 51225348 | 51224537 | 51224537 | Nonsense_Mutation | G | A | p.Q1071* |
| STAD | TCGA-IN-A6RR-01 | exon_skip_113241 | 51223210 | 51225348 | 51224537 | 51224537 | Nonsense_Mutation | G | A | p.Q1071X |
| BLCA | TCGA-FD-A6TE-01 | exon_skip_113241 | 51223210 | 51225348 | 51224627 | 51224627 | Nonsense_Mutation | C | A | p.E1041* |
| READ | TCGA-AG-A002-01 | exon_skip_113241 | 51223210 | 51225348 | 51224741 | 51224741 | Nonsense_Mutation | G | A | p.R1003X |
| STAD | TCGA-CD-A4MJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51224807 | 51224807 | Nonsense_Mutation | G | A | p.Q981* |
| STAD | TCGA-CD-A4MJ-01 | exon_skip_113241 | 51223210 | 51225348 | 51224807 | 51224807 | Nonsense_Mutation | G | A | p.Q981X |
| STAD | TCGA-BR-7901-01 | exon_skip_113241 | 51223210 | 51225348 | 51224813 | 51224813 | Nonsense_Mutation | C | A | p.E979* |
| PAAD | TCGA-IB-7651-01 | exon_skip_113246 | 51239019 | 51239186 | 51239168 | 51239168 | Nonsense_Mutation | G | A | p.R278* |
| PAAD | TCGA-IB-7651-01 | exon_skip_113246 | 51239019 | 51239186 | 51239168 | 51239168 | Nonsense_Mutation | G | A | p.R278X |
| GBM | TCGA-06-6693-01 | exon_skip_113243 | 51226575 | 51227077 | 51227078 | 51227078 | Splice_Site | C | G | p.V633_splice |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
 | Sample: TCGA-A8-A06Q-01 |
| Cancer type: BRCA | |
| ESID: exon_skip_113241 | |
| Skipped exon start: 51223210 | |
| Skipped exon end: 51225348 | |
| Mutation start: 51223742 | |
| Mutation end: 51223742 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: G | |
| Mutation seq: A | |
| AAchange: p.Q1336* | |
exon_skip_113241_BRCA_TCGA-A8-A06Q-01.png | |
exon_skip_125148_BRCA_TCGA-A8-A06Q-01.png | |
exon_skip_472234_BRCA_TCGA-A8-A06Q-01.png | |
 | Sample: TCGA-IB-7651-01 |
| Cancer type: PAAD | |
| ESID: exon_skip_113246 | |
| Skipped exon start: 51239019 | |
| Skipped exon end: 51239186 | |
| Mutation start: 51239168 | |
| Mutation end: 51239168 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: G | |
| Mutation seq: A | |
| AAchange: p.R278X | |
| Sample: TCGA-IB-7651-01 |
| Cancer type: PAAD | |
| ESID: exon_skip_113241 | |
| Skipped exon start: 51223210 | |
| Skipped exon end: 51225348 | |
| Mutation start: 51224357 | |
| Mutation end: 51224357 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: G | |
| Mutation seq: A | |
| AAchange: p.R1131X | |
| Sample: TCGA-IB-7651-01 |
| Cancer type: PAAD | |
| ESID: exon_skip_113246 | |
| Skipped exon start: 51239019 | |
| Skipped exon end: 51239186 | |
| Mutation start: 51239168 | |
| Mutation end: 51239168 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: G | |
| Mutation seq: A | |
| AAchange: p.R278* | |
| Sample: TCGA-IB-7651-01 |
| Cancer type: PAAD | |
| ESID: exon_skip_113241 | |
| Skipped exon start: 51223210 | |
| Skipped exon end: 51225348 | |
| Mutation start: 51224357 | |
| Mutation end: 51224357 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: G | |
| Mutation seq: A | |
| AAchange: p.R1131* | |
exon_skip_113241_PAAD_TCGA-IB-7651-01.png | |
exon_skip_115380_PAAD_TCGA-IB-7651-01.png | |
exon_skip_124564_PAAD_TCGA-IB-7651-01.png | |
exon_skip_135806_PAAD_TCGA-IB-7651-01.png | |
exon_skip_139341_PAAD_TCGA-IB-7651-01.png | |
exon_skip_153733_PAAD_TCGA-IB-7651-01.png | |
exon_skip_155805_PAAD_TCGA-IB-7651-01.png | |
exon_skip_18053_PAAD_TCGA-IB-7651-01.png | |
exon_skip_18056_PAAD_TCGA-IB-7651-01.png | |
exon_skip_23067_PAAD_TCGA-IB-7651-01.png | |
exon_skip_287059_PAAD_TCGA-IB-7651-01.png | |
exon_skip_294631_PAAD_TCGA-IB-7651-01.png | |
exon_skip_298512_PAAD_TCGA-IB-7651-01.png | |
exon_skip_306900_PAAD_TCGA-IB-7651-01.png | |
exon_skip_307723_PAAD_TCGA-IB-7651-01.png | |
exon_skip_315960_PAAD_TCGA-IB-7651-01.png | |
exon_skip_324675_PAAD_TCGA-IB-7651-01.png | |
exon_skip_330351_PAAD_TCGA-IB-7651-01.png | |
exon_skip_334330_PAAD_TCGA-IB-7651-01.png | |
exon_skip_341784_PAAD_TCGA-IB-7651-01.png | |
exon_skip_343314_PAAD_TCGA-IB-7651-01.png | |
exon_skip_348329_PAAD_TCGA-IB-7651-01.png | |
exon_skip_354232_PAAD_TCGA-IB-7651-01.png | |
exon_skip_370626_PAAD_TCGA-IB-7651-01.png | |
exon_skip_377740_PAAD_TCGA-IB-7651-01.png | |
exon_skip_385032_PAAD_TCGA-IB-7651-01.png | |
exon_skip_390031_PAAD_TCGA-IB-7651-01.png | |
exon_skip_422548_PAAD_TCGA-IB-7651-01.png | |
exon_skip_424536_PAAD_TCGA-IB-7651-01.png | |
exon_skip_431753_PAAD_TCGA-IB-7651-01.png | |
exon_skip_432982_PAAD_TCGA-IB-7651-01.png | |
exon_skip_435489_PAAD_TCGA-IB-7651-01.png | |
exon_skip_435729_PAAD_TCGA-IB-7651-01.png | |
exon_skip_441705_PAAD_TCGA-IB-7651-01.png | |
exon_skip_448879_PAAD_TCGA-IB-7651-01.png | |
exon_skip_468347_PAAD_TCGA-IB-7651-01.png | |
exon_skip_494000_PAAD_TCGA-IB-7651-01.png | |
exon_skip_494029_PAAD_TCGA-IB-7651-01.png | |
exon_skip_499410_PAAD_TCGA-IB-7651-01.png | |
exon_skip_499695_PAAD_TCGA-IB-7651-01.png | |
exon_skip_499697_PAAD_TCGA-IB-7651-01.png | |
exon_skip_79905_PAAD_TCGA-IB-7651-01.png | |
exon_skip_80096_PAAD_TCGA-IB-7651-01.png | |
exon_skip_95924_PAAD_TCGA-IB-7651-01.png | |
 | Sample: TCGA-BR-7901-01 |
| Cancer type: STAD | |
| ESID: exon_skip_113241 | |
| Skipped exon start: 51223210 | |
| Skipped exon end: 51225348 | |
| Mutation start: 51224813 | |
| Mutation end: 51224813 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: C | |
| Mutation seq: A | |
| AAchange: p.E979* | |
exon_skip_113241_STAD_TCGA-BR-7901-01.png | |
 | Sample: TCGA-A6-6781-01 |
| Cancer type: COAD | |
| ESID: exon_skip_113241 | |
| Skipped exon start: 51223210 | |
| Skipped exon end: 51225348 | |
| Mutation start: 51225062 | |
| Mutation end: 51225065 | |
| Mutation type: Frame_Shift_Del | |
| Reference seq: TCTC | |
| Mutation seq: - | |
| AAchange: p.895_896del | |
exon_skip_113241_COAD_TCGA-A6-6781-01.png | |
exon_skip_142268_COAD_TCGA-A6-6781-01.png | |
exon_skip_347536_COAD_TCGA-A6-6781-01.png | |
exon_skip_3490_COAD_TCGA-A6-6781-01.png | |
exon_skip_35193_COAD_TCGA-A6-6781-01.png | |
exon_skip_390969_COAD_TCGA-A6-6781-01.png | |
exon_skip_438601_COAD_TCGA-A6-6781-01.png | |
exon_skip_438605_COAD_TCGA-A6-6781-01.png | |
exon_skip_77217_COAD_TCGA-A6-6781-01.png | |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| HUH28_BILIARY_TRACT | 51226575 | 51227077 | 51226613 | 51226614 | Frame_Shift_Del | CT | - | p.E787fs |
| TGBC11TKB_STOMACH | 51210961 | 51211083 | 51211043 | 51211044 | Frame_Shift_Ins | - | T | p.I1702fs |
| CROAP3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51224069 | 51224070 | Frame_Shift_Ins | - | A | p.D1227fs |
| DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51196241 | 51196441 | 51196322 | 51196323 | Missense_Mutation | GC | CT | p.R1999Q |
| SNU1040_LARGE_INTESTINE | 51196241 | 51196441 | 51196338 | 51196338 | Missense_Mutation | A | C | p.F1994C |
| NCIH23_LUNG | 51196241 | 51196441 | 51196360 | 51196360 | Missense_Mutation | G | A | p.P1987S |
| NCIH1155_LUNG | 51196241 | 51196441 | 51196374 | 51196374 | Missense_Mutation | T | C | p.Q1982R |
| TGBC11TKB_STOMACH | 51196241 | 51196441 | 51196389 | 51196389 | Missense_Mutation | T | C | p.D1977G |
| SKMEL5_SKIN | 51196241 | 51196441 | 51196414 | 51196414 | Missense_Mutation | G | A | p.P1969S |
| HCC78_LUNG | 51208300 | 51208446 | 51208317 | 51208317 | Missense_Mutation | G | T | p.Q1811K |
| HEC108_ENDOMETRIUM | 51210961 | 51211083 | 51211025 | 51211025 | Missense_Mutation | T | C | p.Y1708C |
| MYLA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51210961 | 51211083 | 51211066 | 51211066 | Missense_Mutation | A | C | p.D1694E |
| FTC133_THYROID | 51219236 | 51219451 | 51219288 | 51219288 | Missense_Mutation | C | T | p.R1633Q |
| GAMG_CENTRAL_NERVOUS_SYSTEM | 51219236 | 51219451 | 51219426 | 51219426 | Missense_Mutation | T | G | p.Q1587P |
| SNU840_OVARY | 51223210 | 51225348 | 51223263 | 51223263 | Missense_Mutation | C | A | p.M1495I |
| NCIH2087_LUNG | 51223210 | 51225348 | 51223310 | 51223310 | Missense_Mutation | C | A | p.D1480Y |
| LU165_LUNG | 51223210 | 51225348 | 51223324 | 51223324 | Missense_Mutation | A | G | p.L1475S |
| MS751_CERVIX | 51223210 | 51225348 | 51223330 | 51223330 | Missense_Mutation | G | A | p.T1473I |
| KCL22_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51223354 | 51223354 | Missense_Mutation | G | A | p.T1465I |
| 59M_OVARY | 51223210 | 51225348 | 51223487 | 51223487 | Missense_Mutation | C | T | p.E1421K |
| CMLT1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51223507 | 51223507 | Missense_Mutation | C | A | p.G1414V |
| HEC108_ENDOMETRIUM | 51223210 | 51225348 | 51223525 | 51223525 | Missense_Mutation | T | C | p.E1408G |
| JHOS2_OVARY | 51223210 | 51225348 | 51223703 | 51223703 | Missense_Mutation | C | T | p.E1349K |
| KMS34_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51223703 | 51223703 | Missense_Mutation | C | T | p.E1349K |
| NCIH1385_LUNG | 51223210 | 51225348 | 51223739 | 51223739 | Missense_Mutation | C | G | p.E1337Q |
| CMLT1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51223837 | 51223837 | Missense_Mutation | A | G | p.F1304S |
| SNU478_BILIARY_TRACT | 51223210 | 51225348 | 51223970 | 51223970 | Missense_Mutation | C | T | p.D1260N |
| KMBC2_URINARY_TRACT | 51223210 | 51225348 | 51224105 | 51224105 | Missense_Mutation | C | T | p.D1215N |
| SHP77_LUNG | 51223210 | 51225348 | 51224159 | 51224159 | Missense_Mutation | T | G | p.K1197Q |
| KMBC2_URINARY_TRACT | 51223210 | 51225348 | 51224198 | 51224198 | Missense_Mutation | C | G | p.E1184Q |
| BCP1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51224198 | 51224198 | Missense_Mutation | C | G | p.E1184Q |
| RS5_FIBROBLAST | 51223210 | 51225348 | 51224303 | 51224303 | Missense_Mutation | C | A | p.D1149Y |
| SNU1040_LARGE_INTESTINE | 51223210 | 51225348 | 51224333 | 51224333 | Missense_Mutation | T | C | p.T1139A |
| HS172T_FIBROBLAST | 51223210 | 51225348 | 51224428 | 51224428 | Missense_Mutation | C | G | p.C1107S |
| MEWO_SKIN | 51223210 | 51225348 | 51224447 | 51224447 | Missense_Mutation | C | T | p.G1101R |
| KP1N_PANCREAS | 51223210 | 51225348 | 51224560 | 51224560 | Missense_Mutation | T | G | p.N1063T |
| SNUC2A_LARGE_INTESTINE | 51223210 | 51225348 | 51224617 | 51224617 | Missense_Mutation | A | T | p.V1044E |
| SNUC2B_LARGE_INTESTINE | 51223210 | 51225348 | 51224617 | 51224617 | Missense_Mutation | A | T | p.V1044E |
| NB14_AUTONOMIC_GANGLIA | 51223210 | 51225348 | 51224641 | 51224641 | Missense_Mutation | C | T | p.C1036Y |
| PATU8988T_PANCREAS | 51223210 | 51225348 | 51224771 | 51224771 | Missense_Mutation | T | C | p.I993V |
| PATU8988S_PANCREAS | 51223210 | 51225348 | 51224771 | 51224771 | Missense_Mutation | T | C | p.I993V |
| VMCUB1_URINARY_TRACT | 51223210 | 51225348 | 51224794 | 51224794 | Missense_Mutation | G | C | p.S985C |
| SNU1_STOMACH | 51223210 | 51225348 | 51224846 | 51224846 | Missense_Mutation | G | A | p.R968W |
| SNUC5_LARGE_INTESTINE | 51223210 | 51225348 | 51224911 | 51224911 | Missense_Mutation | C | T | p.R946K |
| HEC251_ENDOMETRIUM | 51223210 | 51225348 | 51224996 | 51224996 | Missense_Mutation | C | A | p.D918Y |
| LNCAPCLONEFGC_PROSTATE | 51223210 | 51225348 | 51224998 | 51224998 | Missense_Mutation | T | C | p.Q917R |
| NCIH187_LUNG | 51223210 | 51225348 | 51225089 | 51225089 | Missense_Mutation | A | T | p.S887T |
| SET2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51223210 | 51225348 | 51225118 | 51225118 | Missense_Mutation | T | C | p.K877R |
| RERFLCKJ_LUNG | 51223210 | 51225348 | 51225162 | 51225163 | Missense_Mutation | CT | AC | p.K862S |
| 2313287_STOMACH | 51223210 | 51225348 | 51225233 | 51225233 | Missense_Mutation | G | A | p.R839C |
| NCIH1568_LUNG | 51223210 | 51225348 | 51225235 | 51225235 | Missense_Mutation | C | T | p.G838E |
| KU1919_URINARY_TRACT | 51223210 | 51225348 | 51225284 | 51225284 | Missense_Mutation | A | C | p.C822G |
| SNUC2B_LARGE_INTESTINE | 51223210 | 51225348 | 51225302 | 51225302 | Missense_Mutation | C | T | p.A816T |
| CORL51_LUNG | 51226575 | 51227077 | 51226634 | 51226634 | Missense_Mutation | C | A | p.E780D |
| SNU407_LARGE_INTESTINE | 51226575 | 51227077 | 51226797 | 51226797 | Missense_Mutation | T | C | p.E726G |
| KM12_LARGE_INTESTINE | 51226575 | 51227077 | 51226888 | 51226888 | Missense_Mutation | T | C | p.R696G |
| KO52_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51226575 | 51227077 | 51226962 | 51226962 | Missense_Mutation | T | A | p.D671V |
| NB69_AUTONOMIC_GANGLIA | 51233025 | 51233114 | 51233062 | 51233062 | Missense_Mutation | A | G | p.L533P |
| JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51239019 | 51239186 | 51239164 | 51239164 | Missense_Mutation | C | T | p.R279H |
| SNU1040_LARGE_INTESTINE | 51239019 | 51239186 | 51239170 | 51239170 | Missense_Mutation | C | T | p.G277E |
| TE1_OESOPHAGUS | 51239019 | 51239186 | 51239182 | 51239182 | Missense_Mutation | A | T | p.F273Y |
| KMS27_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51288592 | 51288795 | 51288643 | 51288643 | Missense_Mutation | C | G | p.E44D |
| KMS27_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51288592 | 51288718 | 51288643 | 51288643 | Missense_Mutation | C | G | p.E44D |
| SNU1040_LARGE_INTESTINE | 51288592 | 51288795 | 51288672 | 51288672 | Missense_Mutation | C | T | p.D35N |
| SNU1040_LARGE_INTESTINE | 51288592 | 51288718 | 51288672 | 51288672 | Missense_Mutation | C | T | p.D35N |
| LAMA84_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51288592 | 51288795 | 51288707 | 51288707 | Missense_Mutation | G | A | p.T23M |
| LAMA84_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 51288592 | 51288718 | 51288707 | 51288707 | Missense_Mutation | G | A | p.T23M |
| SCC9_UPPER_AERODIGESTIVE_TRACT | 51288592 | 51288795 | 51288710 | 51288710 | Missense_Mutation | G | A | p.T22M |
| SCC9_UPPER_AERODIGESTIVE_TRACT | 51288592 | 51288718 | 51288710 | 51288710 | Missense_Mutation | G | A | p.T22M |
| RL952_ENDOMETRIUM | 51223210 | 51225348 | 51224588 | 51224588 | Nonsense_Mutation | G | A | p.Q1054* |
| HCT15_LARGE_INTESTINE | 51226575 | 51227077 | 51226951 | 51226951 | Nonsense_Mutation | C | A | p.E675* |
| HRT18_LARGE_INTESTINE | 51226575 | 51227077 | 51226951 | 51226951 | Nonsense_Mutation | C | A | p.E675* |
Top |
Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for NIN |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | HNSC | rs2073347 | chr14:51223789 | C/T | 2.98e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | HNSC | rs12882191 | chr14:51224374 | T/G | 5.19e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | HNSC | rs2073347 | chr14:51223789 | C/T | 1.23e-03 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | HNSC | rs12882191 | chr14:51224374 | T/G | 2.33e-03 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | HNSC | rs2236316 | chr14:51224417 | C/G | 2.64e-03 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | BRCA | rs2073349 | chr14:51225132 | G/T | 9.80e-06 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | BRCA | rs2073348 | chr14:51224658 | A/T | 1.82e-05 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | BRCA | rs2073348 | chr14:51224658 | A/T | 4.84e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | BRCA | rs2073349 | chr14:51225132 | G/T | 6.43e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | READ | rs2073347 | chr14:51223789 | C/T | 3.19e-06 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | READ | rs12882191 | chr14:51224374 | T/G | 5.30e-06 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | READ | rs12882191 | chr14:51224374 | T/G | 2.20e-05 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | READ | rs2073347 | chr14:51223789 | C/T | 5.84e-05 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | PRAD | rs2073348 | chr14:51224658 | A/T | 1.85e-03 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | STAD | rs2073347 | chr14:51223789 | C/T | 1.21e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | STAD | rs12882191 | chr14:51224374 | T/G | 1.27e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | STAD | rs12882191 | chr14:51224374 | T/G | 1.29e-03 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | STAD | rs2073347 | chr14:51223789 | C/T | 1.41e-03 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | THCA | rs2073349 | chr14:51225132 | G/T | 7.50e-05 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | THCA | rs2073348 | chr14:51224658 | A/T | 7.93e-05 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | THCA | rs2073349 | chr14:51225132 | G/T | 1.62e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | THCA | rs2073348 | chr14:51224658 | A/T | 8.12e-04 |
| exon_skip_113241 | 14 | 51221462:51221585:51223209:51225348:51226574:51227077 | 51223209:51225348 | ENST00000453196.1,ENST00000382041.3,ENST00000530997.2,ENST00000476352.1,ENST00000530853.1,ENST00000324330.9,ENST00000245441.5,ENST00000389869.3 | THCA | rs2073349 | chr14:51225132 | G/T | 1.55e-03 |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for NIN |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for NIN |
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RelatedDrugs for NIN |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NIN |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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