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Center for Computational Systems Medicine
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Gene summary

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Gene structures and expression levels

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Exon skipping events with PSIs in TCGA

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Exon skipping events with PSIs in GTEx

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Open reading frame (ORF) annotation in the exon skipping event

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Exon skipping events in the canonical protein sequence

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SNVs in the skipped exons with depth of coverage

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Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

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Related drugs with this gene

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Related diseases with this gene

Gene summary for TXNDC11

check button Gene summary
Gene informationGene symbol

TXNDC11

Gene ID

51061

Gene namethioredoxin domain containing 11
SynonymsEFP1
Cytomap

16p13.13

Type of geneprotein-coding
Descriptionthioredoxin domain-containing protein 11EF-hand binding protein 1
Modification date20180519
UniProtAcc

Q6PKC3

ContextPubMed: TXNDC11 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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Exon skipping events across known transcript of Ensembl for TXNDC11 from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Gene isoform structures and expression levels for TXNDC11

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


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Exon skipping events with PSIs in TCGA for TXNDC11

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_1418921611772938:11773693:11778020:11778101:11781712:1178182211778020:11778101ENSG00000153066.8ENST00000570917.1,ENST00000283033.5,ENST00000356957.3
exon_skip_1418941611781712:11781822:11782158:11782301:11785145:1178593811782158:11782301ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1418971611782158:11782301:11785145:11785938:11791980:1179218111785145:11785938ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1419131611791989:11792181:11794307:11794420:11815169:1181529111794307:11794420ENSG00000153066.8ENST00000571882.1
exon_skip_1419141611791989:11792181:11794307:11794420:11815432:1181552611794307:11794420ENSG00000153066.8ENST00000575591.1,ENST00000283033.5,ENST00000576969.1
exon_skip_1419201611791989:11792181:11815432:11815526:11827837:1182785511815432:11815526ENSG00000153066.8ENST00000573174.1
exon_skip_1419331611794307:11794420:11797525:11797606:11815432:1181552611797525:11797606ENSG00000153066.8ENST00000356957.3
exon_skip_1419371611794307:11794420:11815169:11815291:11815432:1181552611815169:11815291ENSG00000153066.8ENST00000571882.1
exon_skip_1419381611794307:11794420:11815432:11815526:11824500:1182463011815432:11815526ENSG00000153066.8ENST00000283033.5
exon_skip_1419391611794307:11794420:11815432:11815526:11827837:1182785511815432:11815526ENSG00000153066.8ENST00000576969.1
exon_skip_1419451611815432:11815526:11824500:11824630:11827837:1182785511824500:11824630ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1419481611815432:11815526:11827837:11827935:11829872:1182998611827837:11827935ENSG00000153066.8ENST00000573174.1,ENST00000576969.1
exon_skip_1419551611824500:11824630:11827837:11827935:11829872:1182998611827837:11827935ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1419591611827837:11827935:11829872:11830089:11836332:1183640311829872:11830089ENSG00000153066.8ENST00000573174.1,ENST00000576969.1,ENST00000356957.3

check button PSI values of skipped exons in TCGA.
psi tcga

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Exon skipping events with PSIs in GTEx for TXNDC11

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_1418921611772938:11773693:11778020:11778101:11781712:1178182211778020:11778101ENSG00000153066.8ENST00000283033.5,ENST00000570917.1,ENST00000356957.3
exon_skip_1418941611781712:11781822:11782158:11782301:11785145:1178593811782158:11782301ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1418971611782158:11782301:11785145:11785938:11791980:1179218111785145:11785938ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1419131611791989:11792181:11794307:11794420:11815169:1181529111794307:11794420ENSG00000153066.8ENST00000571882.1
exon_skip_1419141611791989:11792181:11794307:11794420:11815432:1181552611794307:11794420ENSG00000153066.8ENST00000283033.5,ENST00000575591.1,ENST00000576969.1
exon_skip_1419201611791989:11792181:11815432:11815526:11827837:1182785511815432:11815526ENSG00000153066.8ENST00000573174.1
exon_skip_1419331611794307:11794420:11797525:11797606:11815432:1181552611797525:11797606ENSG00000153066.8ENST00000356957.3
exon_skip_1419371611794307:11794420:11815169:11815291:11815432:1181552611815169:11815291ENSG00000153066.8ENST00000571882.1
exon_skip_1419381611794307:11794420:11815432:11815526:11824500:1182463011815432:11815526ENSG00000153066.8ENST00000283033.5
exon_skip_1419391611794307:11794420:11815432:11815526:11827837:1182785511815432:11815526ENSG00000153066.8ENST00000576969.1
exon_skip_1419451611815432:11815526:11824500:11824630:11827837:1182785511824500:11824630ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1419481611815432:11815526:11827837:11827935:11829872:1182998611827837:11827935ENSG00000153066.8ENST00000576969.1,ENST00000573174.1
exon_skip_1419551611824500:11824630:11827837:11827935:11829872:1182998611827837:11827935ENSG00000153066.8ENST00000283033.5,ENST00000356957.3
exon_skip_1419591611827837:11827935:11829872:11830089:11836332:1183640311829872:11830089ENSG00000153066.8ENST00000356957.3,ENST00000576969.1,ENST00000573174.1

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for TXNDC11

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000003569571178215811782301Frame-shift
ENST000003569571178514511785938Frame-shift
ENST000003569571182450011824630Frame-shift
ENST000003569571182783711827935Frame-shift
ENST000003569571182987211830089Frame-shift
ENST000003569571177802011778101In-frame
ENST000003569571179752511797606In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000003569571178215811782301Frame-shift
ENST000003569571178514511785938Frame-shift
ENST000003569571182450011824630Frame-shift
ENST000003569571182783711827935Frame-shift
ENST000003569571182987211830089Frame-shift
ENST000003569571177802011778101In-frame
ENST000003569571179752511797606In-frame

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Infer the effects of exon skipping event on protein functional features for TXNDC11

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST0000035695731959851179752511797606902982264291
ENST000003569573195985117780201177810123432423745771

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST0000035695731959851179752511797606902982264291
ENST000003569573195985117780201177810123432423745771

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
Q6PKC3264291265291Alternative sequenceID=VSP_014335;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q6PKC3264291265278Alternative sequenceID=VSP_014336;Note=In isoform 3. ALESTSSPRALVSF->DGVSPCRPGWSAVA;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q6PKC3264291279985Alternative sequenceID=VSP_014337;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q6PKC32642911985ChainID=PRO_0000120173;Note=Thioredoxin domain-containing protein 11
Q6PKC3745771279985Alternative sequenceID=VSP_014337;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q6PKC37457711985ChainID=PRO_0000120173;Note=Thioredoxin domain-containing protein 11
Q6PKC3745771649799DomainNote=Thioredoxin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00691


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
Q6PKC3264291265291Alternative sequenceID=VSP_014335;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q6PKC3264291265278Alternative sequenceID=VSP_014336;Note=In isoform 3. ALESTSSPRALVSF->DGVSPCRPGWSAVA;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q6PKC3264291279985Alternative sequenceID=VSP_014337;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q6PKC32642911985ChainID=PRO_0000120173;Note=Thioredoxin domain-containing protein 11
Q6PKC3745771279985Alternative sequenceID=VSP_014337;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q6PKC37457711985ChainID=PRO_0000120173;Note=Thioredoxin domain-containing protein 11
Q6PKC3745771649799DomainNote=Thioredoxin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00691


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SNVs in the skipped exons for TXNDC11

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.
TXNDC11_CHOL_exon_skip_141897_psi_boxplot.png
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TXNDC11_LIHC_exon_skip_141897_psi_boxplot.png
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TXNDC11_LIHC_exon_skip_141945_psi_boxplot.png
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TXNDC11_SKCM_exon_skip_141897_psi_boxplot.png
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check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
LIHCTCGA-DD-A1EG-01exon_skip_141892
11778021117781011177803211778032Frame_Shift_DelA-p.F768fs
LIHCTCGA-DD-A39Y-01exon_skip_141892
11778021117781011177803211778032Frame_Shift_DelA-p.F768fs
LIHCTCGA-DD-A39Y-01exon_skip_141897
11785146117859381178540911785409Frame_Shift_DelG-p.P573fs
LIHCTCGA-DD-A1EG-01exon_skip_141913
exon_skip_141914
11794308117944201179438411794384Frame_Shift_DelT-p.N304fs
LIHCTCGA-G3-A3CJ-01exon_skip_141939
exon_skip_141938
exon_skip_141920
11815433118155261181548711815487Frame_Shift_DelG-p.Q247fs
UCECTCGA-B5-A0K6-01exon_skip_141939
exon_skip_141938
exon_skip_141920
11815433118155261181548711815487Frame_Shift_DelG-p.Q247fs
LIHCTCGA-G3-A3CJ-01exon_skip_141945
11824501118246301182457611824576Frame_Shift_DelA-p.F208fs
LIHCTCGA-DD-A39Y-01exon_skip_141945
11824501118246301182459011824590Frame_Shift_DelA-p.Y204fs
ESCATCGA-L5-A8NF-01exon_skip_141955
exon_skip_141948
11827838118279351182786911827873Frame_Shift_DelAAAAG-p.F178fs
ESCATCGA-L5-A8NF-01exon_skip_141955
exon_skip_141948
11827838118279351182786911827873Frame_Shift_DelAAAAG-p.FFY178fs
UCECTCGA-D1-A163-01exon_skip_141897
11785146117859381178564711785648Frame_Shift_Ins-Ap.F493fs
CHOLTCGA-YR-A95A-01exon_skip_141897
11785146117859381178575011785750Nonsense_MutationCTp.W432X
SKCMTCGA-EE-A2MD-06exon_skip_141897
11785146117859381178589611785896Nonsense_MutationGAp.Q411*
UCECTCGA-AX-A0J0-01exon_skip_141945
11824501118246301182458811824588Nonsense_MutationGTp.Y204*

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description
TXNDC11_11815432_11815526_11824500_11824630_11827837_11827855_TCGA-DD-A39Y-01Sample: TCGA-DD-A39Y-01
Cancer type: LIHC
ESID: exon_skip_141892
Skipped exon start: 11778021
Skipped exon end: 11778101
Mutation start: 11778032
Mutation end: 11778032
Mutation type: Frame_Shift_Del
Reference seq: A
Mutation seq: -
AAchange: p.F768fs
TXNDC11_11815432_11815526_11824500_11824630_11827837_11827855_TCGA-DD-A39Y-01Sample: TCGA-DD-A39Y-01
Cancer type: LIHC
ESID: exon_skip_141897
Skipped exon start: 11785146
Skipped exon end: 11785938
Mutation start: 11785409
Mutation end: 11785409
Mutation type: Frame_Shift_Del
Reference seq: G
Mutation seq: -
AAchange: p.P573fs
TXNDC11_11815432_11815526_11824500_11824630_11827837_11827855_TCGA-DD-A39Y-01Sample: TCGA-DD-A39Y-01
Cancer type: LIHC
ESID: exon_skip_141945
Skipped exon start: 11824501
Skipped exon end: 11824630
Mutation start: 11824590
Mutation end: 11824590
Mutation type: Frame_Shift_Del
Reference seq: A
Mutation seq: -
AAchange: p.Y204fs
exon_skip_105023_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_101824_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_106032_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_106378_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_106523_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_106524_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_109527_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_109529_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_110000_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_11029_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_111893_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_111894_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_112042_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_112647_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_114045_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_114046_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_114565_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_11916_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_1234_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_1237_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_124639_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_124693_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_124695_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_130535_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_13071_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_131505_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_133556_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_135211_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_135545_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_135553_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_135763_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_137564_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_138947_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_139222_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_141370_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_141945_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_143515_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_143728_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_14772_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_148319_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_148332_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_14897_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_150985_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_151979_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_153387_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_153786_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_155021_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_155962_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_155964_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_19897_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_19898_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_19902_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_20050_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_20053_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_21823_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_22411_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_22908_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_23470_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_25336_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_26316_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_26958_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_27038_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_27415_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_283977_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_292562_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_293040_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_293045_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_293052_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_293118_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_293546_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_293549_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_294064_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_294067_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_29565_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_29733_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_299242_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_299287_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_299304_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_299306_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_299307_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_30001_LIHC_TCGA-DD-A39Y-01.png
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exon_skip_300924_LIHC_TCGA-DD-A39Y-01.png
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TXNDC11_11791989_11792181_11794307_11794420_11815432_11815526_TCGA-DD-A1EG-01Sample: TCGA-DD-A1EG-01
Cancer type: LIHC
ESID: exon_skip_141892
Skipped exon start: 11778021
Skipped exon end: 11778101
Mutation start: 11778032
Mutation end: 11778032
Mutation type: Frame_Shift_Del
Reference seq: A
Mutation seq: -
AAchange: p.F768fs
TXNDC11_11791989_11792181_11794307_11794420_11815432_11815526_TCGA-DD-A1EG-01Sample: TCGA-DD-A1EG-01
Cancer type: LIHC
ESID: exon_skip_141914
Skipped exon start: 11794308
Skipped exon end: 11794420
Mutation start: 11794384
Mutation end: 11794384
Mutation type: Frame_Shift_Del
Reference seq: T
Mutation seq: -
AAchange: p.N304fs
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TXNDC11_11782158_11782301_11785145_11785938_11791980_11792181_TCGA-EE-A2MD-06Sample: TCGA-EE-A2MD-06
Cancer type: SKCM
ESID: exon_skip_141897
Skipped exon start: 11785146
Skipped exon end: 11785938
Mutation start: 11785896
Mutation end: 11785896
Mutation type: Nonsense_Mutation
Reference seq: G
Mutation seq: A
AAchange: p.Q411*
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TXNDC11_11782158_11782301_11785145_11785938_11791980_11792181_TCGA-DD-A39Y-01Sample: TCGA-DD-A39Y-01
Cancer type: LIHC
ESID: exon_skip_141892
Skipped exon start: 11778021
Skipped exon end: 11778101
Mutation start: 11778032
Mutation end: 11778032
Mutation type: Frame_Shift_Del
Reference seq: A
Mutation seq: -
AAchange: p.F768fs
TXNDC11_11782158_11782301_11785145_11785938_11791980_11792181_TCGA-DD-A39Y-01Sample: TCGA-DD-A39Y-01
Cancer type: LIHC
ESID: exon_skip_141897
Skipped exon start: 11785146
Skipped exon end: 11785938
Mutation start: 11785409
Mutation end: 11785409
Mutation type: Frame_Shift_Del
Reference seq: G
Mutation seq: -
AAchange: p.P573fs
TXNDC11_11782158_11782301_11785145_11785938_11791980_11792181_TCGA-DD-A39Y-01Sample: TCGA-DD-A39Y-01
Cancer type: LIHC
ESID: exon_skip_141945
Skipped exon start: 11824501
Skipped exon end: 11824630
Mutation start: 11824590
Mutation end: 11824590
Mutation type: Frame_Shift_Del
Reference seq: A
Mutation seq: -
AAchange: p.Y204fs
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check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
JHOS4_OVARY11785146117859381178550211785502Frame_Shift_DelC-p.G542fs
SNGM_ENDOMETRIUM11785146117859381178555811785559Frame_Shift_Ins-Ap.L523fs
BHY_UPPER_AERODIGESTIVE_TRACT11785146117859381178564711785648Frame_Shift_Ins-Ap.E494fs
C8166_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE11785146117859381178564711785648Frame_Shift_Ins-Ap.E494fs
PLB985_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE11785146117859381178564711785648Frame_Shift_Ins-Ap.E494fs
RERFLCAI_LUNG11785146117859381178564711785648Frame_Shift_Ins-Ap.E494fs
SEM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE11785146117859381178564711785648Frame_Shift_Ins-Ap.E494fs
SKNMC_BONE11785146117859381178564711785648Frame_Shift_Ins-Ap.E494fs
HEC59_ENDOMETRIUM11785146117859381178569011785691Frame_Shift_Ins-Cp.G479fs
JHOS4_OVARY11785146117859381178551411785528In_Frame_DelGTCCTGCAACATGCA-p.533_538TACCRT>T
HEC6_ENDOMETRIUM11827838118279351182792811827930In_Frame_DelAAC-p.L159del
NCIH2110_LUNG11778021117781011177804311778043Missense_MutationCAp.V765F
LN215_CENTRAL_NERVOUS_SYSTEM11778021117781011177805511778055Missense_MutationGAp.R761C
RH28_SOFT_TISSUE11782159117823011178218711782187Missense_MutationGAp.T699I
RKO_LARGE_INTESTINE11782159117823011178223311782233Missense_MutationCTp.A684T
NCIH716_LARGE_INTESTINE11785146117859381178524711785247Missense_MutationGAp.P627L
MDAMB435S_SKIN11785146117859381178530411785304Missense_MutationTCp.N608S
FTC238_THYROID11785146117859381178542111785421Missense_MutationTCp.E569G
LS1034_LARGE_INTESTINE11785146117859381178543711785437Missense_MutationGCp.L564V
LS1034_MATCHED_NORMAL_TISSUE11785146117859381178543711785437Missense_MutationGCp.L564V
NCIH716_LARGE_INTESTINE11785146117859381178556011785560Missense_MutationACp.L523V
HCC366_LUNG11785146117859381178565311785653Missense_MutationACp.F492V
CCRFCEM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE11785146117859381178569511785695Missense_MutationCTp.G478R
MDAMB157_BREAST11785146117859381178572511785725Missense_MutationCTp.V468I
HEC108_ENDOMETRIUM11785146117859381178573311785733Missense_MutationGCp.T465S
MCAS_OVARY11785146117859381178573311785733Missense_MutationGTp.T465N
KYM1_SOFT_TISSUE11785146117859381178575411785754Missense_MutationTCp.Q458R
RERFLCSQ1_LUNG11785146117859381178582011785820Missense_MutationGAp.P436L
GA10_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE11785146117859381178589911785899Missense_MutationCTp.D410N
NCIH1184_LUNG11794308117944201179433111794331Missense_MutationGAp.H322Y
NB7_AUTONOMIC_GANGLIA11794308117944201179433611794336Missense_MutationTAp.Y320F
BICR16_UPPER_AERODIGESTIVE_TRACT11794308117944201179435111794351Missense_MutationTCp.H315R
HPAC_PANCREAS11794308117944201179436411794364Missense_MutationCGp.V311L
BICR18_UPPER_AERODIGESTIVE_TRACT11794308117944201179436911794369Missense_MutationTCp.K309R
DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE11794308117944201179436911794369Missense_MutationTCp.K309R
DMS79_LUNG11824501118246301182459011824590Missense_MutationATp.Y204N
OUMS23_LARGE_INTESTINE11824501118246301182459811824598Missense_MutationCTp.S201N
HEC251_ENDOMETRIUM11824501118246301182461711824617Missense_MutationCTp.E195K
HS683_CENTRAL_NERVOUS_SYSTEM11827838118279351182784111827841Missense_MutationCTp.R189Q
NCIH2135_LUNG11827838118279351182784111827841Missense_MutationCTp.R189Q
BICR18_UPPER_AERODIGESTIVE_TRACT11827838118279351182785411827854Missense_MutationAGp.Y185H
NB1643_AUTONOMIC_GANGLIA11827838118279351182785511827855Missense_MutationTCp.I184M
SNU1040_LARGE_INTESTINE11827838118279351182788211827882Missense_MutationCAp.Q175H
MFE319_ENDOMETRIUM11829873118300891182991111829911Missense_MutationCTp.A145T
NCIH358_LUNG11829873118300891182992011829920Missense_MutationCAp.A142S
EN_ENDOMETRIUM11829873118300891182992211829922Missense_MutationAGp.I141T
JHUEM7_ENDOMETRIUM11829873118300891183002211830022Missense_MutationGAp.L108F
RCC10RGB_KIDNEY11829873118300891183005511830055Missense_MutationGAp.P97S
HEC251_ENDOMETRIUM11829873118300891183007911830079Missense_MutationCAp.D89Y
TE1_OESOPHAGUS11829873118300891183007911830079Missense_MutationCGp.D89H
HEC59_ENDOMETRIUM11785146117859381178517011785170Nonsense_MutationGAp.Q653*
GP2D_LARGE_INTESTINE11785146117859381178575011785750Nonsense_MutationCTp.W459*
GP5D_LARGE_INTESTINE11785146117859381178575011785750Nonsense_MutationCTp.W459*
MDAMB330_BREAST11824501118246301182453211824532Nonsense_MutationGCp.S223*
SNU1040_LARGE_INTESTINE11794308117944201179430911794309Splice_SiteATp.L329H

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for TXNDC11

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for TXNDC11


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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for TXNDC11


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RelatedDrugs for TXNDC11

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TXNDC11

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource