Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
exon_skip_307931 | 19 | 45281125:45281541:45284161:45284308:45284463:45284620 | 45284161:45284308 | ENSG00000142273.6 | ENST00000341505.4 |
exon_skip_307943 | 19 | 45284161:45284308:45284463:45284620:45285626:45285744 | 45284463:45284620 | ENSG00000142273.6 | ENST00000341505.4,ENST00000270279.3 |
exon_skip_307956 | 19 | 45284571:45284620:45285626:45285748:45287520:45287658 | 45285626:45285748 | ENSG00000142273.6 | ENST00000270279.3 |
exon_skip_307957 | 19 | 45284463:45284620:45285626:45285748:45293260:45293348 | 45285626:45285748 | ENSG00000142273.6 | ENST00000341505.4 |
exon_skip_307979 | 19 | 45285626:45285748:45287520:45287658:45293260:45293348 | 45287520:45287658 | ENSG00000142273.6 | ENST00000270279.3 |
exon_skip_307990 | 19 | 45287520:45287658:45293260:45293348:45295639:45295771 | 45293260:45293348 | ENSG00000142273.6 | ENST00000270279.3 |
exon_skip_308002 | 19 | 45293260:45293348:45295639:45295771:45296730:45296787 | 45295639:45295771 | ENSG00000142273.6 | ENST00000341505.4,ENST00000270279.3 |
exon_skip_308011 | 19 | 45296730:45296877:45297460:45297538:45303637:45303707 | 45297460:45297538 | ENSG00000142273.6 | ENST00000341505.4,ENST00000270279.3 |
Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
exon_skip_307931 | 19 | 45281125:45281541:45284161:45284308:45284463:45284620 | 45284161:45284308 | ENSG00000142273.6 | ENST00000341505.4 |
exon_skip_307943 | 19 | 45284161:45284308:45284463:45284620:45285626:45285744 | 45284463:45284620 | ENSG00000142273.6 | ENST00000270279.3,ENST00000341505.4 |
exon_skip_307956 | 19 | 45284571:45284620:45285626:45285748:45287520:45287658 | 45285626:45285748 | ENSG00000142273.6 | ENST00000270279.3 |
exon_skip_307957 | 19 | 45284463:45284620:45285626:45285748:45293260:45293348 | 45285626:45285748 | ENSG00000142273.6 | ENST00000341505.4 |
exon_skip_307979 | 19 | 45285626:45285748:45287520:45287658:45293260:45293348 | 45287520:45287658 | ENSG00000142273.6 | ENST00000270279.3 |
exon_skip_307990 | 19 | 45287520:45287658:45293260:45293348:45295639:45295771 | 45293260:45293348 | ENSG00000142273.6 | ENST00000270279.3 |
exon_skip_308002 | 19 | 45293260:45293348:45295639:45295771:45296730:45296787 | 45295639:45295771 | ENSG00000142273.6 | ENST00000270279.3,ENST00000341505.4 |
exon_skip_308011 | 19 | 45296730:45296877:45297460:45297538:45303637:45303707 | 45297460:45297538 | ENSG00000142273.6 | ENST00000270279.3,ENST00000341505.4 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9ULV8 | 260 | 305 | 261 | 306 | Alternative sequence | ID=VSP_005732;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:10362357;Dbxref=PMID:10362357 |
Q9ULV8 | 260 | 305 | 260 | 265 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 267 | 269 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 273 | 278 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 284 | 287 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 264 | 264 | Binding site | Note=Phosphotyrosine |
Q9ULV8 | 260 | 305 | 1 | 474 | Chain | ID=PRO_0000055866;Note=E3 ubiquitin-protein ligase CBL-C |
Q9ULV8 | 260 | 305 | 7 | 321 | Domain | Note=Cbl-PTB;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00839 |
Q9ULV8 | 260 | 305 | 294 | 303 | Helix | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 264 | 264 | Mutagenesis | Note=Abolishes interaction with EGFR. Decreases interaction with SRC and abolishes SRC ubiquitination. R->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 265 | 265 | Mutagenesis | Note=Enhances interaction with EGFR and SRC as well as SRC ubiquitination. P->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 266 | 266 | Mutagenesis | Note=Decreases interactions with EGFR and SRC as well as SRC ubiquitination. S->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 268 | 268 | Mutagenesis | Note=Abolishes interaction with EGFR. Decreases interaction with and ubiquitination of SRC. T->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 276 | 276 | Mutagenesis | Note=No effect on interaction with RET. Binds slightly to SRC%2C this interaction is independent of SRC phosphorylation. Strongly decreases SRC ubiquitination. Abolishes interaction with EGFR. G->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidenc |
Q9ULV8 | 260 | 305 | 219 | 321 | Region | Note=SH2-like |
Q9ULV8 | 335 | 379 | 1 | 474 | Chain | ID=PRO_0000055866;Note=E3 ubiquitin-protein ligase CBL-C |
Q9ULV8 | 335 | 379 | 341 | 341 | Modified residue | Note=Phosphotyrosine%3B by SRC;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Dbxref=PMID:20525694,PMID:23145173 |
Q9ULV8 | 335 | 379 | 341 | 341 | Mutagenesis | Note=Induces E3 activity and autoubiquitination. Releases ubiquitin-conjugating enzyme E2 UBE2D2 faster. Y->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14661060,ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Db |
Q9ULV8 | 335 | 379 | 341 | 341 | Mutagenesis | Note=Abolishes activation by EGF stimulation and enhancement by TGFB1I1 of E3 activity. Y->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14661060,ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Dbxref=PMID:1466106 |
Q9ULV8 | 335 | 379 | 341 | 341 | Mutagenesis | Note=Abolishes E3 activity. Missing;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14661060,ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Dbxref=PMID:14661060,PMID:20525694,PMID:23145173 |
Q9ULV8 | 335 | 379 | 351 | 351 | Mutagenesis | Note=No effect on TGFB1I1 and SRC interactions. Abolishes SRC ubiquitination. Abolishes interaction with TGFB1I1%3B when associated with A-366. Abolishes interaction with RET and inhibition of RET degradation. C->A;Ontology_term=ECO:0000269,ECO:0000269,EC |
Q9ULV8 | 335 | 379 | 366 | 366 | Mutagenesis | Note=Abolishes interaction with TGFB1I1. Abolishes interaction with TGFB1I1%3B when associated with A-351. C->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23145173;Dbxref=PMID:23145173 |
Q9ULV8 | 335 | 379 | 322 | 350 | Region | Note=Linker |
Q9ULV8 | 335 | 379 | 351 | 474 | Region | Note=Interaction with RET;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:18753381;Dbxref=PMID:18753381 |
Q9ULV8 | 335 | 379 | 351 | 390 | Zinc finger | Note=RING-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00175 |
Q9ULV8 | 428 | 454 | 1 | 474 | Chain | ID=PRO_0000055866;Note=E3 ubiquitin-protein ligase CBL-C |
Q9ULV8 | 428 | 454 | 351 | 474 | Region | Note=Interaction with RET;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:18753381;Dbxref=PMID:18753381 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9ULV8 | 260 | 305 | 261 | 306 | Alternative sequence | ID=VSP_005732;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:10362357;Dbxref=PMID:10362357 |
Q9ULV8 | 260 | 305 | 260 | 265 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 267 | 269 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 273 | 278 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 284 | 287 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 264 | 264 | Binding site | Note=Phosphotyrosine |
Q9ULV8 | 260 | 305 | 1 | 474 | Chain | ID=PRO_0000055866;Note=E3 ubiquitin-protein ligase CBL-C |
Q9ULV8 | 260 | 305 | 7 | 321 | Domain | Note=Cbl-PTB;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00839 |
Q9ULV8 | 260 | 305 | 294 | 303 | Helix | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3VRP |
Q9ULV8 | 260 | 305 | 264 | 264 | Mutagenesis | Note=Abolishes interaction with EGFR. Decreases interaction with SRC and abolishes SRC ubiquitination. R->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 265 | 265 | Mutagenesis | Note=Enhances interaction with EGFR and SRC as well as SRC ubiquitination. P->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 266 | 266 | Mutagenesis | Note=Decreases interactions with EGFR and SRC as well as SRC ubiquitination. S->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 268 | 268 | Mutagenesis | Note=Abolishes interaction with EGFR. Decreases interaction with and ubiquitination of SRC. T->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:22888118;Dbxref=PMID:22888118 |
Q9ULV8 | 260 | 305 | 276 | 276 | Mutagenesis | Note=No effect on interaction with RET. Binds slightly to SRC%2C this interaction is independent of SRC phosphorylation. Strongly decreases SRC ubiquitination. Abolishes interaction with EGFR. G->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidenc |
Q9ULV8 | 260 | 305 | 219 | 321 | Region | Note=SH2-like |
Q9ULV8 | 335 | 379 | 1 | 474 | Chain | ID=PRO_0000055866;Note=E3 ubiquitin-protein ligase CBL-C |
Q9ULV8 | 335 | 379 | 341 | 341 | Modified residue | Note=Phosphotyrosine%3B by SRC;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Dbxref=PMID:20525694,PMID:23145173 |
Q9ULV8 | 335 | 379 | 341 | 341 | Mutagenesis | Note=Induces E3 activity and autoubiquitination. Releases ubiquitin-conjugating enzyme E2 UBE2D2 faster. Y->E;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14661060,ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Db |
Q9ULV8 | 335 | 379 | 341 | 341 | Mutagenesis | Note=Abolishes activation by EGF stimulation and enhancement by TGFB1I1 of E3 activity. Y->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14661060,ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Dbxref=PMID:1466106 |
Q9ULV8 | 335 | 379 | 341 | 341 | Mutagenesis | Note=Abolishes E3 activity. Missing;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14661060,ECO:0000269|PubMed:20525694,ECO:0000269|PubMed:23145173;Dbxref=PMID:14661060,PMID:20525694,PMID:23145173 |
Q9ULV8 | 335 | 379 | 351 | 351 | Mutagenesis | Note=No effect on TGFB1I1 and SRC interactions. Abolishes SRC ubiquitination. Abolishes interaction with TGFB1I1%3B when associated with A-366. Abolishes interaction with RET and inhibition of RET degradation. C->A;Ontology_term=ECO:0000269,ECO:0000269,EC |
Q9ULV8 | 335 | 379 | 366 | 366 | Mutagenesis | Note=Abolishes interaction with TGFB1I1. Abolishes interaction with TGFB1I1%3B when associated with A-351. C->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23145173;Dbxref=PMID:23145173 |
Q9ULV8 | 335 | 379 | 322 | 350 | Region | Note=Linker |
Q9ULV8 | 335 | 379 | 351 | 474 | Region | Note=Interaction with RET;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:18753381;Dbxref=PMID:18753381 |
Q9ULV8 | 335 | 379 | 351 | 390 | Zinc finger | Note=RING-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00175 |
Q9ULV8 | 428 | 454 | 1 | 474 | Chain | ID=PRO_0000055866;Note=E3 ubiquitin-protein ligase CBL-C |
Q9ULV8 | 428 | 454 | 351 | 474 | Region | Note=Interaction with RET;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:18753381;Dbxref=PMID:18753381 |