Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
exon_skip_352923 | 20 | 48431544:48431726:48439597:48439678:48456077:48456136 | 48439597:48439678 | ENSG00000197818.7 | ENST00000361573.2,ENST00000541138.1,ENST00000417961.1,ENST00000539601.1 |
exon_skip_352924 | 20 | 48439597:48439678:48456077:48456136:48461572:48461656 | 48456077:48456136 | ENSG00000197818.7 | ENST00000361573.2,ENST00000541138.1,ENST00000417961.1 |
exon_skip_352927 | 20 | 48456077:48456136:48461572:48461656:48466115:48466217 | 48461572:48461656 | ENSG00000197818.7 | ENST00000361573.2,ENST00000541138.1,ENST00000417961.1 |
exon_skip_352929 | 20 | 48456077:48456136:48466115:48466217:48471974:48472118 | 48466115:48466217 | ENSG00000197818.7 | ENST00000539601.1 |
exon_skip_352931 | 20 | 48461572:48461656:48466115:48466217:48471974:48472118 | 48466115:48466217 | ENSG00000197818.7 | ENST00000541138.1 |
exon_skip_352933 | 20 | 48466115:48466217:48467298:48467381:48471974:48472118 | 48467298:48467381 | ENSG00000197818.7 | ENST00000417961.1 |
exon_skip_352934 | 20 | 48466115:48466217:48467346:48467381:48471974:48472118 | 48467346:48467381 | ENSG00000197818.7 | ENST00000361573.2 |
exon_skip_352942 | 20 | 48471974:48472118:48481264:48481381:48491241:48491358 | 48481264:48481381 | ENSG00000197818.7 | ENST00000541138.1 |
exon_skip_352943 | 20 | 48481275:48481381:48491241:48491358:48494517:48494600 | 48491241:48491358 | ENSG00000197818.7 | ENST00000361573.2,ENST00000541138.1,ENST00000417961.1,ENST00000539601.1 |
exon_skip_352950 | 20 | 48500382:48500603:48503288:48503435:48504365:48505040 | 48503288:48503435 | ENSG00000197818.7 | ENST00000361573.2,ENST00000541138.1,ENST00000417961.1,ENST00000539601.1 |
Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
exon_skip_352923 | 20 | 48431544:48431726:48439597:48439678:48456077:48456136 | 48439597:48439678 | ENSG00000197818.7 | ENST00000417961.1,ENST00000361573.2,ENST00000541138.1,ENST00000539601.1 |
exon_skip_352924 | 20 | 48439597:48439678:48456077:48456136:48461572:48461656 | 48456077:48456136 | ENSG00000197818.7 | ENST00000417961.1,ENST00000361573.2,ENST00000541138.1 |
exon_skip_352927 | 20 | 48456077:48456136:48461572:48461656:48466115:48466217 | 48461572:48461656 | ENSG00000197818.7 | ENST00000417961.1,ENST00000361573.2,ENST00000541138.1 |
exon_skip_352929 | 20 | 48456077:48456136:48466115:48466217:48471974:48472118 | 48466115:48466217 | ENSG00000197818.7 | ENST00000539601.1 |
exon_skip_352931 | 20 | 48461572:48461656:48466115:48466217:48471974:48472118 | 48466115:48466217 | ENSG00000197818.7 | ENST00000541138.1 |
exon_skip_352933 | 20 | 48466115:48466217:48467298:48467381:48471974:48472118 | 48467298:48467381 | ENSG00000197818.7 | ENST00000417961.1 |
exon_skip_352934 | 20 | 48466115:48466217:48467346:48467381:48471974:48472118 | 48467346:48467381 | ENSG00000197818.7 | ENST00000361573.2 |
exon_skip_352942 | 20 | 48471974:48472118:48481264:48481381:48491241:48491358 | 48481264:48481381 | ENSG00000197818.7 | ENST00000541138.1 |
exon_skip_352943 | 20 | 48481275:48481381:48491241:48491358:48494517:48494600 | 48491241:48491358 | ENSG00000197818.7 | ENST00000417961.1,ENST00000361573.2,ENST00000541138.1,ENST00000539601.1 |
exon_skip_352950 | 20 | 48500382:48500603:48503288:48503435:48504365:48505040 | 48503288:48503435 | ENSG00000197818.7 | ENST00000417961.1,ENST00000361573.2,ENST00000541138.1,ENST00000539601.1 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9Y2E8 | 69 | 96 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 69 | 96 | 60 | 80 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 69 | 96 | 84 | 104 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 116 | 144 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 116 | 144 | 123 | 143 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 319 | 358 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 319 | 358 | 311 | 331 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 319 | 358 | 354 | 374 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 497 | 546 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 497 | 546 | 510 | 510 | Modified residue | Note=Phosphothreonine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q8R4D1 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9Y2E8 | 69 | 96 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 69 | 96 | 60 | 80 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 69 | 96 | 84 | 104 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 116 | 144 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 116 | 144 | 123 | 143 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 319 | 358 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 319 | 358 | 311 | 331 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 319 | 358 | 354 | 374 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9Y2E8 | 497 | 546 | 1 | 581 | Chain | ID=PRO_0000052365;Note=Sodium/hydrogen exchanger 8 |
Q9Y2E8 | 497 | 546 | 510 | 510 | Modified residue | Note=Phosphothreonine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q8R4D1 |
Depth of coverage in three exons | Mutation description |
| Sample: TCGA-L5-A4OI-01 |
Cancer type: ESCA |
ESID: exon_skip_352933 |
Skipped exon start: 48467299 |
Skipped exon end: 48467381 |
Mutation start: 48467301 |
Mutation end: 48467301 |
Mutation type: Frame_Shift_Del |
Reference seq: T |
Mutation seq: - |
AAchange: p.F182fs |
| Sample: TCGA-L5-A4OI-01 |
Cancer type: ESCA |
ESID: exon_skip_352933 |
Skipped exon start: 48467299 |
Skipped exon end: 48467381 |
Mutation start: 48467300 |
Mutation end: 48467301 |
Mutation type: Frame_Shift_Ins |
Reference seq: - |
Mutation seq: T |
AAchange: p.F183fs |
exon_skip_112640_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_112965_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_122690_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_129706_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_135696_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_135704_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_135820_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_147024_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_149455_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_307491_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_308211_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_308974_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_309972_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_311841_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_328488_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_349475_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_352933_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_374468_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_374469_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_386802_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_423582_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_428975_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_434375_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_439047_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_439048_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_441654_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_443160_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_443161_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_457940_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_461524_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_470470_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_470694_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_474097_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_477308_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_487634_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_495456_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_502537_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_506535_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_55351_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_77217_ESCA_TCGA-L5-A4OI-01.png
|
exon_skip_91288_ESCA_TCGA-L5-A4OI-01.png
|
| Sample: TCGA-LN-A4A3-01 |
Cancer type: ESCA |
ESID: exon_skip_352933 |
Skipped exon start: 48467299 |
Skipped exon end: 48467381 |
Mutation start: 48467300 |
Mutation end: 48467301 |
Mutation type: Frame_Shift_Ins |
Reference seq: - |
Mutation seq: T |
AAchange: p.F183fs |
exon_skip_352933_ESCA_TCGA-LN-A4A3-01.png
|
exon_skip_99411_ESCA_TCGA-LN-A4A3-01.png
|
| Sample: TCGA-FB-A7DR-01 |
Cancer type: PAAD |
ESID: exon_skip_352933 |
Skipped exon start: 48467299 |
Skipped exon end: 48467381 |
Mutation start: 48467301 |
Mutation end: 48467301 |
Mutation type: Frame_Shift_Del |
Reference seq: T |
Mutation seq: - |
AAchange: p.G179fs |
exon_skip_352933_PAAD_TCGA-FB-A7DR-01.png
|