Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
exon_skip_448721 | 6 | 27215509:27215586:27215660:27215827:27220586:27220728 | 27215660:27215827 | ENSG00000112812.11 | ENST00000421826.2 |
exon_skip_448722 | 6 | 27215509:27215586:27215660:27215827:27222471:27222478 | 27215660:27215827 | ENSG00000112812.11 | ENST00000466364.1 |
exon_skip_448746 | 6 | 27215673:27215827:27216625:27216725:27216878:27217008 | 27216625:27216725 | ENSG00000112812.11 | ENST00000470870.1,ENST00000230582.3 |
exon_skip_448747 | 6 | 27215673:27215827:27216625:27216725:27220586:27220728 | 27216625:27216725 | ENSG00000112812.11 | ENST00000454665.2 |
exon_skip_448758 | 6 | 27215673:27215827:27216878:27217008:27220586:27220728 | 27216878:27217008 | ENSG00000112812.11 | ENST00000468930.1 |
exon_skip_448776 | 6 | 27215673:27215827:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000421826.2 |
exon_skip_448783 | 6 | 27215673:27215827:27222471:27222651:27222764:27222898 | 27222471:27222651 | ENSG00000112812.11 | ENST00000466364.1 |
exon_skip_448787 | 6 | 27216714:27216725:27216878:27217008:27220586:27220728 | 27216878:27217008 | ENSG00000112812.11 | ENST00000470870.1 |
exon_skip_448794 | 6 | 27216714:27216725:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000454665.2 |
exon_skip_448814 | 6 | 27216878:27217008:27218461:27218585:27218820:27218898 | 27218461:27218585 | ENSG00000112812.11 | ENST00000475106.1,ENST00000230582.3 |
exon_skip_448816 | 6 | 27216878:27217008:27218461:27218585:27220586:27220728 | 27218461:27218585 | ENSG00000112812.11 | ENST00000485993.1 |
exon_skip_448832 | 6 | 27216878:27217008:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000470870.1,ENST00000468930.1 |
exon_skip_448845 | 6 | 27218524:27218585:27218820:27218898:27218995:27219043 | 27218820:27218898 | ENSG00000112812.11 | ENST00000230582.3 |
exon_skip_448846 | 6 | 27218524:27218585:27218820:27218898:27220586:27220728 | 27218820:27218898 | ENSG00000112812.11 | ENST00000475106.1 |
exon_skip_448853 | 6 | 27218820:27218898:27218995:27219043:27219528:27219819 | 27218995:27219043 | ENSG00000112812.11 | ENST00000230582.3 |
exon_skip_448856 | 6 | 27218995:27219043:27219528:27219819:27220586:27220728 | 27219528:27219819 | ENSG00000112812.11 | ENST00000481125.1,ENST00000230582.3 |
exon_skip_448859 | 6 | 27218995:27219043:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000488649.1 |
exon_skip_448860 | 6 | 27218995:27219043:27220586:27220728:27222764:27222898 | 27220586:27220728 | ENSG00000112812.11 | ENST00000492575.1 |
exon_skip_448865 | 6 | 27219100:27219280:27220586:27220728:27222764:27222910 | 27220586:27220728 | ENSG00000112812.11 | ENST00000459736.1 |
exon_skip_448867 | 6 | 27219528:27219819:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000230582.3,ENST00000468138.1 |
exon_skip_448869 | 6 | 27219528:27219819:27220586:27220728:27222764:27222898 | 27220586:27220728 | ENSG00000112812.11 | ENST00000481125.1 |
exon_skip_448874 | 6 | 27219528:27219819:27222471:27222651:27222764:27222898 | 27222471:27222651 | ENSG00000112812.11 | ENST00000471463.1 |
exon_skip_448879 | 6 | 27220586:27220728:27222471:27222651:27222764:27222898 | 27222471:27222651 | ENSG00000112812.11 | ENST00000488649.1,ENST00000230582.3,ENST00000484493.1,ENST00000421826.2,ENST00000454665.2,ENST00000468138.1 |
Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
exon_skip_448856 | 6 | 27218995:27219043:27219528:27219819:27220586:27220728 | 27219528:27219819 | ENSG00000112812.11 | ENST00000230582.3,ENST00000481125.1 |
exon_skip_448859 | 6 | 27218995:27219043:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000488649.1 |
exon_skip_448860 | 6 | 27218995:27219043:27220586:27220728:27222764:27222898 | 27220586:27220728 | ENSG00000112812.11 | ENST00000492575.1 |
exon_skip_448865 | 6 | 27219100:27219280:27220586:27220728:27222764:27222910 | 27220586:27220728 | ENSG00000112812.11 | ENST00000459736.1 |
exon_skip_448867 | 6 | 27219528:27219819:27220586:27220728:27222471:27222478 | 27220586:27220728 | ENSG00000112812.11 | ENST00000230582.3,ENST00000468138.1 |
exon_skip_448869 | 6 | 27219528:27219819:27220586:27220728:27222764:27222898 | 27220586:27220728 | ENSG00000112812.11 | ENST00000481125.1 |
exon_skip_448874 | 6 | 27219528:27219819:27222471:27222651:27222764:27222898 | 27222471:27222651 | ENSG00000112812.11 | ENST00000471463.1 |
exon_skip_448879 | 6 | 27220586:27220728:27222471:27222651:27222764:27222898 | 27222471:27222651 | ENSG00000112812.11 | ENST00000454665.2,ENST00000421826.2,ENST00000230582.3,ENST00000488649.1,ENST00000484493.1,ENST00000468138.1 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9NQE7 | 197 | 223 | 25 | 514 | Chain | ID=PRO_0000027320;Note=Thymus-specific serine protease |
Q9NQE7 | 197 | 223 | 204 | 204 | Natural variant | ID=VAR_051827;Note=A->G;Dbxref=dbSNP:rs35466700 |
Q9NQE7 | 223 | 239 | 25 | 514 | Chain | ID=PRO_0000027320;Note=Thymus-specific serine protease |
Q9NQE7 | 239 | 336 | 25 | 514 | Chain | ID=PRO_0000027320;Note=Thymus-specific serine protease |
Q9NQE7 | 239 | 336 | 321 | 321 | Glycosylation | Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
Q9NQE7 | 383 | 443 | 25 | 514 | Chain | ID=PRO_0000027320;Note=Thymus-specific serine protease |
Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
LIHC | TCGA-DD-A39Y-01 | exon_skip_448747 exon_skip_448746
| 27216626 | 27216725 | 27216628 | 27216628 | Frame_Shift_Del | T | - | p.R80fs |
STAD | TCGA-HU-A4GT-01 | exon_skip_448845 exon_skip_448846
| 27218821 | 27218898 | 27218823 | 27218823 | Frame_Shift_Del | C | - | p.F198fs |
COAD | TCGA-AZ-6598-01 | exon_skip_448856
| 27219529 | 27219819 | 27219760 | 27219760 | Frame_Shift_Del | G | - | p.L316fs |
LIHC | TCGA-DD-A39Y-01 | exon_skip_448776 exon_skip_448832 exon_skip_448794 exon_skip_448860 exon_skip_448859 exon_skip_448867 exon_skip_448865 exon_skip_448869
| 27220587 | 27220728 | 27220623 | 27220623 | Frame_Shift_Del | T | - | p.F349fs |
SKCM | TCGA-FS-A4F8-06 | exon_skip_448721 exon_skip_448722
| 27215661 | 27215827 | 27215684 | 27215684 | Nonsense_Mutation | G | T | p.E32* |
SKCM | TCGA-FS-A4F8-06 | exon_skip_448721 exon_skip_448722
| 27215661 | 27215827 | 27215684 | 27215684 | Nonsense_Mutation | G | T | p.E32X |
LUAD | TCGA-05-5428-01 | exon_skip_448747 exon_skip_448746
| 27216626 | 27216725 | 27216634 | 27216634 | Nonsense_Mutation | G | A | p.W82* |
SKCM | TCGA-GN-A4U4-06 | exon_skip_448747 exon_skip_448746
| 27216626 | 27216725 | 27216652 | 27216652 | Nonsense_Mutation | G | A | p.W88* |
SKCM | TCGA-D3-A3C3-06 | exon_skip_448787 exon_skip_448758
| 27216879 | 27217008 | 27216906 | 27216906 | Nonsense_Mutation | G | A | p.W122* |
SKCM | TCGA-W3-AA21-06 | exon_skip_448787 exon_skip_448758
| 27216879 | 27217008 | 27216980 | 27216980 | Nonsense_Mutation | C | T | p.Q147* |
LIHC | TCGA-FV-A495-01 | exon_skip_448776 exon_skip_448832 exon_skip_448794 exon_skip_448860 exon_skip_448859 exon_skip_448867 exon_skip_448865 exon_skip_448869
| 27220587 | 27220728 | 27220730 | 27220730 | Splice_Site | T | C | . |
PAAD | TCGA-IB-7651-01 | exon_skip_448874 exon_skip_448879 exon_skip_448783
| 27222472 | 27222651 | 27222471 | 27222471 | Splice_Site | G | T | . |
Depth of coverage in three exons | Mutation description |
| Sample: TCGA-IB-7651-01 |
Cancer type: PAAD |
ESID: exon_skip_448783 |
Skipped exon start: 27222472 |
Skipped exon end: 27222651 |
Mutation start: 27222471 |
Mutation end: 27222471 |
Mutation type: Splice_Site |
Reference seq: G |
Mutation seq: T |
AAchange: . |
exon_skip_113241_PAAD_TCGA-IB-7651-01.png
|
exon_skip_115380_PAAD_TCGA-IB-7651-01.png
|
exon_skip_124564_PAAD_TCGA-IB-7651-01.png
|
exon_skip_135806_PAAD_TCGA-IB-7651-01.png
|
exon_skip_139341_PAAD_TCGA-IB-7651-01.png
|
exon_skip_153733_PAAD_TCGA-IB-7651-01.png
|
exon_skip_155805_PAAD_TCGA-IB-7651-01.png
|
exon_skip_18053_PAAD_TCGA-IB-7651-01.png
|
exon_skip_18056_PAAD_TCGA-IB-7651-01.png
|
exon_skip_23067_PAAD_TCGA-IB-7651-01.png
|
exon_skip_287059_PAAD_TCGA-IB-7651-01.png
|
exon_skip_294631_PAAD_TCGA-IB-7651-01.png
|
exon_skip_298512_PAAD_TCGA-IB-7651-01.png
|
exon_skip_306900_PAAD_TCGA-IB-7651-01.png
|
exon_skip_307723_PAAD_TCGA-IB-7651-01.png
|
exon_skip_315960_PAAD_TCGA-IB-7651-01.png
|
exon_skip_324675_PAAD_TCGA-IB-7651-01.png
|
exon_skip_330351_PAAD_TCGA-IB-7651-01.png
|
exon_skip_334330_PAAD_TCGA-IB-7651-01.png
|
exon_skip_341784_PAAD_TCGA-IB-7651-01.png
|
exon_skip_343314_PAAD_TCGA-IB-7651-01.png
|
exon_skip_348329_PAAD_TCGA-IB-7651-01.png
|
exon_skip_354232_PAAD_TCGA-IB-7651-01.png
|
exon_skip_370626_PAAD_TCGA-IB-7651-01.png
|
exon_skip_377740_PAAD_TCGA-IB-7651-01.png
|
exon_skip_385032_PAAD_TCGA-IB-7651-01.png
|
exon_skip_390031_PAAD_TCGA-IB-7651-01.png
|
exon_skip_422548_PAAD_TCGA-IB-7651-01.png
|
exon_skip_424536_PAAD_TCGA-IB-7651-01.png
|
exon_skip_431753_PAAD_TCGA-IB-7651-01.png
|
exon_skip_432982_PAAD_TCGA-IB-7651-01.png
|
exon_skip_435489_PAAD_TCGA-IB-7651-01.png
|
exon_skip_435729_PAAD_TCGA-IB-7651-01.png
|
exon_skip_441705_PAAD_TCGA-IB-7651-01.png
|
exon_skip_448879_PAAD_TCGA-IB-7651-01.png
|
exon_skip_468347_PAAD_TCGA-IB-7651-01.png
|
exon_skip_494000_PAAD_TCGA-IB-7651-01.png
|
exon_skip_494029_PAAD_TCGA-IB-7651-01.png
|
exon_skip_499410_PAAD_TCGA-IB-7651-01.png
|
exon_skip_499695_PAAD_TCGA-IB-7651-01.png
|
exon_skip_499697_PAAD_TCGA-IB-7651-01.png
|
exon_skip_79905_PAAD_TCGA-IB-7651-01.png
|
exon_skip_80096_PAAD_TCGA-IB-7651-01.png
|
exon_skip_95924_PAAD_TCGA-IB-7651-01.png
|