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Center for Computational Systems Medicine
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Gene summary

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Gene structures and expression levels

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Exon skipping events with PSIs in TCGA

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Exon skipping events with PSIs in GTEx

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Open reading frame (ORF) annotation in the exon skipping event

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Exon skipping events in the canonical protein sequence

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SNVs in the skipped exons with depth of coverage

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Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

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Related drugs with this gene

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Related diseases with this gene

Gene summary for SNX25

check button Gene summary
Gene informationGene symbol

SNX25

Gene ID

83891

Gene namesorting nexin 25
SynonymsMSTP043|SBBI31
Cytomap

4q35.1

Type of geneprotein-coding
Descriptionsorting nexin-25
Modification date20180519
UniProtAcc

Q9H3E2

ContextPubMed: SNX25 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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Exon skipping events across known transcript of Ensembl for SNX25 from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Gene isoform structures and expression levels for SNX25

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


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Exon skipping events with PSIs in TCGA for SNX25

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_4272874186168447:186168532:186180001:186180218:186185591:186185652186180001:186180218ENSG00000109762.11ENST00000506896.1,ENST00000264694.8,ENST00000504273.1
exon_skip_4272924186185591:186185764:186188122:186188309:186209165:186209236186188122:186188309ENSG00000109762.11ENST00000264694.8,ENST00000504273.1
exon_skip_4272954186188122:186188309:186209165:186209236:186231788:186231970186209165:186209236ENSG00000109762.11ENST00000264694.8,ENST00000504273.1
exon_skip_4273004186231788:186231970:186241886:186242018:186244681:186244954186241886:186242018ENSG00000109762.11ENST00000512853.1,ENST00000264694.8,ENST00000504273.1
exon_skip_4273034186244681:186244954:186253748:186253867:186260532:186260664186253748:186253867ENSG00000109762.11ENST00000504959.1
exon_skip_4273054186244681:186244954:186253748:186253913:186260532:186260664186253748:186253913ENSG00000109762.11ENST00000512853.1,ENST00000264694.8,ENST00000504273.1
exon_skip_4273104186253748:186253913:186260532:186260664:186263129:186263270186260532:186260664ENSG00000109762.11ENST00000512853.1,ENST00000264694.8,ENST00000504273.1
exon_skip_4273114186263129:186263270:186267690:186267804:186272598:186272763186267690:186267804ENSG00000109762.11ENST00000264694.8,ENST00000504273.1,ENST00000504959.1
exon_skip_4273124186263129:186263270:186267690:186267804:186274638:186274756186267690:186267804ENSG00000109762.11ENST00000512853.1
exon_skip_4273144186267690:186267804:186272598:186272763:186274638:186274756186272598:186272763ENSG00000109762.11ENST00000264694.8,ENST00000504273.1,ENST00000504959.1
exon_skip_4273174186267690:186267804:186274638:186274756:186278824:186278891186274638:186274756ENSG00000109762.11ENST00000512853.1
exon_skip_4273194186272598:186272763:186274638:186274756:186278824:186278891186274638:186274756ENSG00000109762.11ENST00000264694.8,ENST00000504273.1,ENST00000504959.1
exon_skip_4273224186278824:186278891:186283077:186283259:186283764:186283865186283077:186283259ENSG00000109762.11ENST00000512853.1,ENST00000264694.8,ENST00000504273.1,ENST00000504959.1

check button PSI values of skipped exons in TCGA.
psi tcga

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Exon skipping events with PSIs in GTEx for SNX25

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_4272874186168447:186168532:186180001:186180218:186185591:186185652186180001:186180218ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000506896.1
exon_skip_4272924186185591:186185764:186188122:186188309:186209165:186209236186188122:186188309ENSG00000109762.11ENST00000504273.1,ENST00000264694.8
exon_skip_4272954186188122:186188309:186209165:186209236:186231788:186231970186209165:186209236ENSG00000109762.11ENST00000504273.1,ENST00000264694.8
exon_skip_4273004186231788:186231970:186241886:186242018:186244681:186244954186241886:186242018ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000512853.1
exon_skip_4273034186244681:186244954:186253748:186253867:186260532:186260664186253748:186253867ENSG00000109762.11ENST00000504959.1
exon_skip_4273054186244681:186244954:186253748:186253913:186260532:186260664186253748:186253913ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000512853.1
exon_skip_4273104186253748:186253913:186260532:186260664:186263129:186263270186260532:186260664ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000512853.1
exon_skip_4273114186263129:186263270:186267690:186267804:186272598:186272763186267690:186267804ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000504959.1
exon_skip_4273124186263129:186263270:186267690:186267804:186274638:186274756186267690:186267804ENSG00000109762.11ENST00000512853.1
exon_skip_4273144186267690:186267804:186272598:186272763:186274638:186274756186272598:186272763ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000504959.1
exon_skip_4273174186267690:186267804:186274638:186274756:186278824:186278891186274638:186274756ENSG00000109762.11ENST00000512853.1
exon_skip_4273194186272598:186272763:186274638:186274756:186278824:186278891186274638:186274756ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000504959.1
exon_skip_4273224186278824:186278891:186283077:186283259:186283764:186283865186283077:186283259ENSG00000109762.11ENST00000504273.1,ENST00000264694.8,ENST00000512853.1,ENST00000504959.1

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for SNX25

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST00000264694186180001186180218Frame-shift
ENST00000504273186180001186180218Frame-shift
ENST00000264694186188122186188309Frame-shift
ENST00000504273186188122186188309Frame-shift
ENST00000264694186209165186209236Frame-shift
ENST00000504273186209165186209236Frame-shift
ENST00000264694186274638186274756Frame-shift
ENST00000504273186274638186274756Frame-shift
ENST00000264694186283077186283259Frame-shift
ENST00000504273186283077186283259Frame-shift
ENST00000264694186241886186242018In-frame
ENST00000504273186241886186242018In-frame
ENST00000264694186253748186253913In-frame
ENST00000504273186253748186253913In-frame
ENST00000264694186260532186260664In-frame
ENST00000504273186260532186260664In-frame
ENST00000264694186267690186267804In-frame
ENST00000504273186267690186267804In-frame
ENST00000264694186272598186272763In-frame
ENST00000504273186272598186272763In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST00000264694186180001186180218Frame-shift
ENST00000504273186180001186180218Frame-shift
ENST00000264694186188122186188309Frame-shift
ENST00000504273186188122186188309Frame-shift
ENST00000264694186209165186209236Frame-shift
ENST00000504273186209165186209236Frame-shift
ENST00000264694186274638186274756Frame-shift
ENST00000504273186274638186274756Frame-shift
ENST00000264694186283077186283259Frame-shift
ENST00000504273186283077186283259Frame-shift
ENST00000264694186241886186242018In-frame
ENST00000504273186241886186242018In-frame
ENST00000264694186253748186253913In-frame
ENST00000504273186253748186253913In-frame
ENST00000264694186260532186260664In-frame
ENST00000504273186260532186260664In-frame
ENST00000264694186267690186267804In-frame
ENST00000504273186267690186267804In-frame
ENST00000264694186272598186272763In-frame
ENST00000504273186272598186272763In-frame

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Infer the effects of exon skipping event on protein functional features for SNX25

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST00000264694328184018624188618624201810931224284328
ENST00000504273334084018624188618624201811471278284328
ENST00000264694328184018625374818625391314981662419474
ENST00000504273334084018625374818625391315521716419474
ENST00000264694328184018626053218626066416631794474518
ENST00000504273334084018626053218626066417171848474518
ENST00000264694328184018626769018626780419362049565603
ENST00000504273334084018626769018626780419902103565603
ENST00000264694328184018627259818627276320502214603658
ENST00000504273334084018627259818627276321042268603658

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST00000264694328184018624188618624201810931224284328
ENST00000504273334084018624188618624201811471278284328
ENST00000264694328184018625374818625391314981662419474
ENST00000504273334084018625374818625391315521716419474
ENST00000264694328184018626053218626066416631794474518
ENST00000504273334084018626053218626066417171848474518
ENST00000264694328184018626769018626780419362049565603
ENST00000504273334084018626769018626780419902103565603
ENST00000264694328184018627259818627276320502214603658
ENST00000504273334084018627259818627276321042268603658

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
Q9H3E22843281840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E22843281840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2284328287401DomainNote=RGS;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00171
Q9H3E2284328287401DomainNote=RGS;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00171
Q9H3E2284328318318Natural variantID=VAR_047057;Note=E->K;Dbxref=dbSNP:rs35700132
Q9H3E2284328318318Natural variantID=VAR_047057;Note=E->K;Dbxref=dbSNP:rs35700132
Q9H3E24194741840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E24194741840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2419474434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E2419474434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E24745181840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E24745181840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2474518434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E2474518434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E2474518508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2474518508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E25656031840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E25656031840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2565603508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2565603508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2565603586586Natural variantID=VAR_047058;Note=I->V;Dbxref=dbSNP:rs3756275
Q9H3E2565603586586Natural variantID=VAR_047058;Note=I->V;Dbxref=dbSNP:rs3756275
Q9H3E2603658604658Alternative sequenceID=VSP_057157;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q9H3E2603658604658Alternative sequenceID=VSP_057157;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q9H3E26036581840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E26036581840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2603658508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2603658508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
Q9H3E22843281840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E22843281840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2284328287401DomainNote=RGS;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00171
Q9H3E2284328287401DomainNote=RGS;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00171
Q9H3E2284328318318Natural variantID=VAR_047057;Note=E->K;Dbxref=dbSNP:rs35700132
Q9H3E2284328318318Natural variantID=VAR_047057;Note=E->K;Dbxref=dbSNP:rs35700132
Q9H3E24194741840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E24194741840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2419474434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E2419474434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E24745181840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E24745181840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2474518434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E2474518434499Coiled coilOntology_term=ECO:0000255;evidence=ECO:0000255
Q9H3E2474518508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2474518508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E25656031840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E25656031840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2565603508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2565603508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2565603586586Natural variantID=VAR_047058;Note=I->V;Dbxref=dbSNP:rs3756275
Q9H3E2565603586586Natural variantID=VAR_047058;Note=I->V;Dbxref=dbSNP:rs3756275
Q9H3E2603658604658Alternative sequenceID=VSP_057157;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q9H3E2603658604658Alternative sequenceID=VSP_057157;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334
Q9H3E26036581840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E26036581840ChainID=PRO_0000213875;Note=Sorting nexin-25
Q9H3E2603658508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147
Q9H3E2603658508628DomainNote=PX;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00147


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SNVs in the skipped exons for SNX25

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.

check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
LIHCTCGA-DD-A3A0-01exon_skip_427312
exon_skip_427311
186267691186267804186267745186267745Frame_Shift_DelA-p.K584fs
LIHCTCGA-DD-A39Y-01exon_skip_427312
exon_skip_427311
186267691186267804186267796186267796Frame_Shift_DelT-p.F601fs
KIRCTCGA-B2-4099-01exon_skip_427314
186272599186272763186272695186272695Frame_Shift_DelA-p.G635fs
STADTCGA-MX-A5UJ-01exon_skip_427314
186272599186272763186272695186272695Frame_Shift_DelA-p.G635fs
LUADTCGA-17-Z055-01exon_skip_427319
exon_skip_427317
186274639186274756186274647186274648Frame_Shift_DelAG-p.TE661fs
LIHCTCGA-DD-A39Y-01exon_skip_427319
exon_skip_427317
186274639186274756186274739186274739Frame_Shift_DelT-p.I692fs
STADTCGA-CG-5733-01exon_skip_427312
exon_skip_427311
186267691186267804186267704186267705Frame_Shift_Ins-Ap.L570fs
STADTCGA-CG-5733-01exon_skip_427312
exon_skip_427311
186267691186267804186267705186267706Frame_Shift_Ins-Ap.L570fs
KIRCTCGA-G6-A5PC-01exon_skip_427312
exon_skip_427311
186267691186267804186267757186267757Nonsense_MutationCTp.Q588X
OVTCGA-24-1464-01exon_skip_427312
exon_skip_427311
186267691186267804186267690186267690Splice_SiteGAe12-1
BRCATCGA-A2-A0CU-01exon_skip_427319
exon_skip_427317
186274639186274756186274637186274637Splice_SiteATe14-2

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description

check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
DV90_LUNG186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
HEC151_ENDOMETRIUM186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
JHUEM2_ENDOMETRIUM186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
SNU520_STOMACH186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
TOV21G_OVARY186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
2313287_STOMACH186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
IM95_STOMACH186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
SNU1_STOMACH186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
LS180_LARGE_INTESTINE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
CAL51_BREAST186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
CTV1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
NCIH630_LARGE_INTESTINE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
RS411_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
SNUC5_LARGE_INTESTINE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
WSUNHL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186272599186272763186272695186272695Frame_Shift_DelA-p.K637fs
EN_ENDOMETRIUM186267691186267804186267704186267705Frame_Shift_Ins-Ap.LK570fs
HEC108_ENDOMETRIUM186180002186180218186180022186180022Missense_MutationGTp.D15Y
DJM1_SKIN186188123186188309186188284186188284Missense_MutationGCp.D192H
HEC251_ENDOMETRIUM186209166186209236186209234186209234Missense_MutationACp.K223T
SISO_CERVIX186241887186242018186241927186241927Missense_MutationGAp.R298Q
GRST_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186241887186242018186241927186241927Missense_MutationGAp.R298Q
CW2_LARGE_INTESTINE186241887186242018186241983186241983Missense_MutationTGp.W317G
DU145_PROSTATE186253749186253867186253779186253779Missense_MutationGAp.V430M
DU145_PROSTATE186253749186253913186253779186253779Missense_MutationGAp.V430M
WM793_SKIN186253749186253867186253842186253842Missense_MutationCGp.L451V
WM793_SKIN186253749186253913186253842186253842Missense_MutationCGp.L451V
MFE319_ENDOMETRIUM186253749186253913186253894186253894Missense_MutationCTp.A468V
BICR18_UPPER_AERODIGESTIVE_TRACT186260533186260664186260536186260536Missense_MutationGAp.V476I
TGBC11TKB_STOMACH186260533186260664186260657186260657Missense_MutationGAp.S516N
VMRCRCZ_KIDNEY186260533186260664186260662186260662Missense_MutationGCp.E518Q
NCIH524_LUNG186267691186267804186267705186267705Missense_MutationATp.L570F
HCC2218_BREAST186267691186267804186267727186267727Missense_MutationCTp.L578F
GP2D_LARGE_INTESTINE186267691186267804186267742186267742Missense_MutationTCp.F583L
JHUEM7_ENDOMETRIUM186267691186267804186267776186267776Missense_MutationCTp.S594L
Y79_AUTONOMIC_GANGLIA186267691186267804186267798186267798Missense_MutationTAp.F601L
EFO21_OVARY186272599186272763186272662186272662Missense_MutationCTp.P625S
SNGM_ENDOMETRIUM186272599186272763186272674186272674Missense_MutationAGp.K629E
LN18_CENTRAL_NERVOUS_SYSTEM186272599186272763186272758186272758Missense_MutationCAp.Q657K
HEC265_ENDOMETRIUM186274639186274756186274652186274652Missense_MutationACp.E663A
BC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186283078186283259186283182186283182Missense_MutationCTp.P755L
SUPT1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE186283078186283259186283182186283182Missense_MutationCTp.P755L
KYSE410_OESOPHAGUS186180002186180218186180179186180179Nonsense_MutationTAp.L67*
ACCMESO1_PLEURA186241887186242018186241893186241893Nonsense_MutationCTp.Q287*
SNU175_LARGE_INTESTINE186267691186267804186267802186267802Nonsense_MutationCTp.Q603*
MDAMB415_BREAST186274639186274756186274744186274744Nonsense_MutationGTp.E694*

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for SNX25

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SNX25


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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SNX25


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RelatedDrugs for SNX25

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SNX25

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource