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| Open reading frame (ORF) annotation in the exon skipping event |
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| 3'-UTR located exon skipping events lost miRNA binding sites |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
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Gene summary for CCDC82 |
 Gene summary |
| Gene information | Gene symbol | CCDC82 | Gene ID | 79780 |
| Gene name | coiled-coil domain containing 82 | |
| Synonyms | HSPC048 | |
| Cytomap | 11q21 | |
| Type of gene | protein-coding | |
| Description | coiled-coil domain-containing protein 82 | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Gene structures and expression levels for CCDC82 |
| Skipped exons in the ROSMAP, MSBB, and Mayo based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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ENSG00000149231
| Differentially expressed gene analysis across multiple brain tissues between AD and control. |
| Tissue type | DEG direction | Base mean exp. | log2FC(AD/control) | P-value | Adj. p-value |
| Differentially expressed isoform analysis across multiple brain tissues between AD and control. |
| Tissue type | DEG direction | ENST | Transcript info. | Base mean exp. | log2FC(AD/control) | P-value | Adjc. p-value |
| Landscape of isoform expressions across multiple brain tissues between AD and control. |
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Exon skipping events with PSIs in ROSMAP, MSBB, and Mayo for CCDC82 |
| Landscape of individual exon skipping event across AD tissues and controls (PSI heatmap). |
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| All exon skipping events in AD cohorts. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon |
| exon_skip_104805 | chr11 | 96383269:96383473:96383962:96384761:96386254:96386293 | 96383962:96384761 |
| exon_skip_160794 | chr11 | 96384658:96384761:96385937:96386020:96386254:96386293 | 96385937:96386020 |
| exon_skip_172338 | chr11 | 96387530:96387613:96388695:96388829:96389844:96389948 | 96388695:96388829 |
| exon_skip_204512 | chr11 | 96365127:96365150:96371013:96371137:96373375:96373467 | 96371013:96371137 |
| exon_skip_220788 | chr11 | 96384658:96384761:96386254:96386293:96387530:96387613 | 96386254:96386293 |
| exon_skip_256225 | chr11 | 96387530:96387613:96388695:96388829:96389844:96389891 | 96388695:96388829 |
| exon_skip_53754 | chr11 | 96387530:96387613:96389365:96389523:96389844:96389891 | 96389365:96389523 |
| exon_skip_73649 | chr11 | 96385937:96386020:96386254:96386293:96387530:96387613 | 96386254:96386293 |
| exon_skip_87002 | chr11 | 96386254:96386293:96387530:96387613:96389844:96389891 | 96387530:96387613 |
| Differentially expressed PSI values of individual exon skipping events in multiple brain tissues between AD and control. |
| Exon skipping information | Tissue type | Avg(PSIs) in AD | Avg(PSIs) in control | Difference (PSI) | Adj. p-value |
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Open reading frame (ORF) annotation in the exon skipping event for CCDC82 |
| Open reading frame (ORF) of individual exon skipping events in ROSMAP based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000645366 | 96385937 | 96386020 | 3UTR-3UTR |
| ENST00000645366 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000645500 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000646638 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000646818 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000644686 | 96387530 | 96387613 | 3UTR-3UTR |
| ENST00000646818 | 96387530 | 96387613 | 3UTR-3UTR |
| ENST00000645500 | 96388695 | 96388829 | 3UTR-3UTR |
| ENST00000645366 | 96389365 | 96389523 | 3UTR-3UTR |
| Open reading frame (ORF) of individual exon skipping events in MSBB based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000645366 | 96385937 | 96386020 | 3UTR-3UTR |
| ENST00000645500 | 96388695 | 96388829 | 3UTR-3UTR |
| Open reading frame (ORF) of individual exon skipping events in Mayo based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000278520 | 96383962 | 96384761 | 3UTR-3CDS |
| ENST00000645500 | 96383962 | 96384761 | 3UTR-3CDS |
| ENST00000646638 | 96383962 | 96384761 | 3UTR-3CDS |
| ENST00000646818 | 96383962 | 96384761 | 3UTR-3CDS |
| ENST00000645366 | 96385937 | 96386020 | 3UTR-3UTR |
| ENST00000645366 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000645500 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000646638 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000646818 | 96386254 | 96386293 | 3UTR-3UTR |
| ENST00000644686 | 96387530 | 96387613 | 3UTR-3UTR |
| ENST00000646818 | 96387530 | 96387613 | 3UTR-3UTR |
| ENST00000645500 | 96388695 | 96388829 | 3UTR-3UTR |
| ENST00000645366 | 96389365 | 96389523 | 3UTR-3UTR |
| ENST00000278520 | 96371013 | 96371137 | Frame-shift |
| ENST00000423339 | 96371013 | 96371137 | Frame-shift |
| ENST00000644686 | 96371013 | 96371137 | Frame-shift |
| ENST00000645366 | 96371013 | 96371137 | Frame-shift |
| ENST00000645439 | 96371013 | 96371137 | Frame-shift |
| ENST00000645500 | 96371013 | 96371137 | Frame-shift |
| ENST00000646638 | 96371013 | 96371137 | Frame-shift |
| ENST00000646818 | 96371013 | 96371137 | Frame-shift |
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Infer the effects of exon skipping event on protein functional features for CCDC82 |
p-ENSG00000149231_img4.png |
| Loci of skipped exons in ROSMAP across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Loci of skipped exons in MSBB across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Loci of skipped exons in Mayo across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Lost protein functional features of individual exon skipping events in ROSMAP. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in MSBB. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in Mayo. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
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3'-UTR located exon skipping events that lost miRNA binding sites in CCDC82 |
| 3'-UTR exon skipping evnets lost miRNA binding. |
| Tissue type | ENST | Exon skip start | Exon skip end | microRNA | Binding site by TargetScan | Binding type by TargetScan | Bdinding site by miRanda | Score of miRanda | Energy by miRanda |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-4254 | chr11:96389422-96389429 | 8mer-1a | chr11:96389422-96389443 | 166.00 | -22.61 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-3671 | chr11:96388765-96388772 | 8mer-1a | chr11:96388751-96388772 | 160.00 | -10.95 |
| Mayo | ENST00000645366 | 96385937 | 96386020 | hsa-miR-6737-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| Mayo | ENST00000645366 | 96385937 | 96386020 | hsa-miR-5008-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-607 | chr11:96388766-96388773 | 8mer-1a | chr11:96388753-96388773 | 152.00 | -10.62 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-3612 | chr11:96389419-96389426 | 8mer-1a | chr11:96389412-96389432 | 153.00 | -18.40 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-631 | chr11:96388756-96388763 | 8mer-1a | chr11:96388743-96388763 | 154.00 | -23.83 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-5572 | chr11:96389510-96389517 | 8mer-1a | chr11:96389497-96389517 | 158.00 | -23.44 |
| Mayo | ENST00000646818 | 96387530 | 96387613 | hsa-miR-6773-3p | chr11:96387551-96387558 | 8mer-1a | chr11:96387550-96387572 | 162.00 | -14.20 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-324-3p | chr11:96388745-96388752 | 8mer-1a | chr11:96388741-96388761 | 158.00 | -23.34 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-1539 | chr11:96389486-96389493 | 8mer-1a | chr11:96389486-96389510 | 169.00 | -35.29 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-637 | chr11:96389503-96389510 | 8mer-1a | chr11:96389486-96389510 | 169.00 | -35.29 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-23a-5p | chr11:96389382-96389389 | 8mer-1a | chr11:96389368-96389398 | 154.00 | -36.32 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-4749-3p | chr11:96389432-96389439 | 8mer-1a | chr11:96389424-96389443 | 173.00 | -30.73 |
| Mayo | ENST00000645366 | 96385937 | 96386020 | hsa-miR-4778-5p | chr11:96385974-96385981 | 8mer-1a | chr11:96385973-96385996 | 158.00 | -12.74 |
| Mayo | ENST00000645366 | 96385937 | 96386020 | hsa-miR-7157-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| Mayo | ENST00000646818 | 96387530 | 96387613 | hsa-miR-644a | chr11:96387599-96387606 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-650 | chr11:96389419-96389426 | 8mer-1a | chr11:96389412-96389432 | 153.00 | -18.40 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4762-5p | chr11:96388734-96388741 | 8mer-1a | chr11:96388729-96388752 | 152.00 | -23.43 |
| Mayo | ENST00000646818 | 96387530 | 96387613 | hsa-miR-576-5p | chr11:96387565-96387572 | 8mer-1a | chr11:96387550-96387572 | 162.00 | -14.20 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-3661 | chr11:96388756-96388763 | 8mer-1a | chr11:96388743-96388763 | 154.00 | -23.83 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4650-3p | chr11:96388774-96388781 | 8mer-1a | chr11:96388772-96388790 | 143.00 | -21.50 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-6509-3p | chr11:96388746-96388753 | 8mer-1a | chr11:96388741-96388761 | 158.00 | -23.34 |
| Mayo | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4667-3p | chr11:96388781-96388788 | 8mer-1a | chr11:96388781-96388801 | 146.00 | -27.06 |
| Mayo | ENST00000646818 | 96387530 | 96387613 | hsa-miR-4289 | chr11:96387603-96387610 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-23b-5p | chr11:96389382-96389389 | 8mer-1a | chr11:96389368-96389398 | 154.00 | -36.32 |
| Mayo | ENST00000646818 | 96387530 | 96387613 | hsa-miR-147a | chr11:96387600-96387607 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| Mayo | ENST00000645366 | 96389365 | 96389523 | hsa-miR-384 | chr11:96389446-96389453 | 8mer-1a | chr11:96389446-96389467 | 160.00 | -19.65 |
| Mayo | ENST00000646818 | 96386254 | 96386293 | hsa-miR-3978 | chr11:96386270-96386277 | 8mer-1a | chr11:96386255-96386277 | 160.00 | -15.52 |
| Mayo | ENST00000646818 | 96387530 | 96387613 | hsa-miR-891a-3p | chr11:96387597-96387604 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-3671 | chr11:96388765-96388772 | 8mer-1a | chr11:96388751-96388772 | 160.00 | -10.95 |
| MSBB | ENST00000645366 | 96385937 | 96386020 | hsa-miR-6737-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| MSBB | ENST00000645366 | 96385937 | 96386020 | hsa-miR-5008-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-607 | chr11:96388766-96388773 | 8mer-1a | chr11:96388753-96388773 | 152.00 | -10.62 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-631 | chr11:96388756-96388763 | 8mer-1a | chr11:96388743-96388763 | 154.00 | -23.83 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-324-3p | chr11:96388745-96388752 | 8mer-1a | chr11:96388741-96388761 | 158.00 | -23.34 |
| MSBB | ENST00000645366 | 96385937 | 96386020 | hsa-miR-4778-5p | chr11:96385974-96385981 | 8mer-1a | chr11:96385973-96385996 | 158.00 | -12.74 |
| MSBB | ENST00000645366 | 96385937 | 96386020 | hsa-miR-7157-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4762-5p | chr11:96388734-96388741 | 8mer-1a | chr11:96388729-96388752 | 152.00 | -23.43 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-3661 | chr11:96388756-96388763 | 8mer-1a | chr11:96388743-96388763 | 154.00 | -23.83 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4650-3p | chr11:96388774-96388781 | 8mer-1a | chr11:96388772-96388790 | 143.00 | -21.50 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-6509-3p | chr11:96388746-96388753 | 8mer-1a | chr11:96388741-96388761 | 158.00 | -23.34 |
| MSBB | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4667-3p | chr11:96388781-96388788 | 8mer-1a | chr11:96388781-96388801 | 146.00 | -27.06 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-4254 | chr11:96389422-96389429 | 8mer-1a | chr11:96389422-96389443 | 166.00 | -22.61 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-3671 | chr11:96388765-96388772 | 8mer-1a | chr11:96388751-96388772 | 160.00 | -10.95 |
| ROSMAP | ENST00000645366 | 96385937 | 96386020 | hsa-miR-6737-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| ROSMAP | ENST00000645366 | 96385937 | 96386020 | hsa-miR-5008-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-607 | chr11:96388766-96388773 | 8mer-1a | chr11:96388753-96388773 | 152.00 | -10.62 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-3612 | chr11:96389419-96389426 | 8mer-1a | chr11:96389412-96389432 | 153.00 | -18.40 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-631 | chr11:96388756-96388763 | 8mer-1a | chr11:96388743-96388763 | 154.00 | -23.83 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-5572 | chr11:96389510-96389517 | 8mer-1a | chr11:96389497-96389517 | 158.00 | -23.44 |
| ROSMAP | ENST00000646818 | 96387530 | 96387613 | hsa-miR-6773-3p | chr11:96387551-96387558 | 8mer-1a | chr11:96387550-96387572 | 162.00 | -14.20 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-324-3p | chr11:96388745-96388752 | 8mer-1a | chr11:96388741-96388761 | 158.00 | -23.34 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-1539 | chr11:96389486-96389493 | 8mer-1a | chr11:96389486-96389510 | 169.00 | -35.29 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-637 | chr11:96389503-96389510 | 8mer-1a | chr11:96389486-96389510 | 169.00 | -35.29 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-23a-5p | chr11:96389382-96389389 | 8mer-1a | chr11:96389368-96389398 | 154.00 | -36.32 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-4749-3p | chr11:96389432-96389439 | 8mer-1a | chr11:96389424-96389443 | 173.00 | -30.73 |
| ROSMAP | ENST00000645366 | 96385937 | 96386020 | hsa-miR-4778-5p | chr11:96385974-96385981 | 8mer-1a | chr11:96385973-96385996 | 158.00 | -12.74 |
| ROSMAP | ENST00000645366 | 96385937 | 96386020 | hsa-miR-7157-3p | chr11:96385971-96385978 | 8mer-1a | chr11:96385958-96385978 | 153.00 | -19.91 |
| ROSMAP | ENST00000646818 | 96387530 | 96387613 | hsa-miR-644a | chr11:96387599-96387606 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-650 | chr11:96389419-96389426 | 8mer-1a | chr11:96389412-96389432 | 153.00 | -18.40 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4762-5p | chr11:96388734-96388741 | 8mer-1a | chr11:96388729-96388752 | 152.00 | -23.43 |
| ROSMAP | ENST00000646818 | 96387530 | 96387613 | hsa-miR-576-5p | chr11:96387565-96387572 | 8mer-1a | chr11:96387550-96387572 | 162.00 | -14.20 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-3661 | chr11:96388756-96388763 | 8mer-1a | chr11:96388743-96388763 | 154.00 | -23.83 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4650-3p | chr11:96388774-96388781 | 8mer-1a | chr11:96388772-96388790 | 143.00 | -21.50 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-6509-3p | chr11:96388746-96388753 | 8mer-1a | chr11:96388741-96388761 | 158.00 | -23.34 |
| ROSMAP | ENST00000645500 | 96388695 | 96388829 | hsa-miR-4667-3p | chr11:96388781-96388788 | 8mer-1a | chr11:96388781-96388801 | 146.00 | -27.06 |
| ROSMAP | ENST00000646818 | 96387530 | 96387613 | hsa-miR-4289 | chr11:96387603-96387610 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-23b-5p | chr11:96389382-96389389 | 8mer-1a | chr11:96389368-96389398 | 154.00 | -36.32 |
| ROSMAP | ENST00000646818 | 96387530 | 96387613 | hsa-miR-147a | chr11:96387600-96387607 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
| ROSMAP | ENST00000645366 | 96389365 | 96389523 | hsa-miR-384 | chr11:96389446-96389453 | 8mer-1a | chr11:96389446-96389467 | 160.00 | -19.65 |
| ROSMAP | ENST00000646818 | 96386254 | 96386293 | hsa-miR-3978 | chr11:96386270-96386277 | 8mer-1a | chr11:96386255-96386277 | 160.00 | -15.52 |
| ROSMAP | ENST00000646818 | 96387530 | 96387613 | hsa-miR-891a-3p | chr11:96387597-96387604 | 8mer-1a | chr11:96387590-96387612 | 151.00 | -15.01 |
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SNVs in the skipped exons for CCDC82 |
| - Differential PSIs between mutated versus non-mutated samples. |
| - Depth of Coverage in the skipped exon of the mutated samples. |
| - Sashimi plot in the skipped exon of the mutated samples. |
| - Non-synonymous mutations located in the skipped exons. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
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AD stage-associated exon skippint events for CCDC82 |
| Associated exon skipping events with Braak staging or Clinical Dementia Rating (CDR). |
| AD stage info | Cohort | Tissue | SE id | Coefficient | P-value | Chromosome | Strand | E1 start | E1 end | Skipped start | Skipped end | E2 start | E2 end |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for CCDC82 |
| sQTL information located at the skipped exons. |
| Tissue type | Exon skip ID | SNP id | Location | P-value | FDR |
| CB | exon_skip_256225 | rs1253227 | chr11:96296318 | 7.228545e-07 | 2.702870e-04 |
| HCC | exon_skip_160794 | rs10831526 | chr11:96454211 | 5.651907e-04 | 3.736176e-02 |
| HCC | exon_skip_160794 | rs1597631 | chr11:96456997 | 5.651907e-04 | 3.736176e-02 |
| HCC | exon_skip_160794 | rs1376492 | chr11:96458952 | 5.901089e-04 | 3.863125e-02 |
| HCC | exon_skip_160794 | rs7928913 | chr11:96451035 | 7.365537e-04 | 4.596834e-02 |
| DLPFC | exon_skip_160794 | rs12791333 | chr11:96344608 | 7.520916e-05 | 6.604323e-03 |
| DLPFC | exon_skip_160794 | rs2155574 | chr11:96380277 | 4.312455e-04 | 2.866555e-02 |
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Correlation with RNA binding proteins (RBPs) for CCDC82 |
| Correlated RBP and related information. |
| Tissue type | RBP name | Exon skip ID | Correlation coeifficient | P-value |
| CB | DAZAP1 | exon_skip_220788 | -4.679418e-01 | 1.561456e-09 |
| CB | SAMD4A | exon_skip_220788 | -5.007334e-01 | 6.780685e-11 |
| CB | ZFP36 | exon_skip_215028 | -4.281072e-01 | 4.634826e-08 |
| CB | HNRNPDL | exon_skip_215028 | -4.424690e-01 | 1.434830e-08 |
| TC | MSI1 | exon_skip_160794 | 4.030932e-01 | 1.258770e-07 |
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RelatedDrugs for CCDC82 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CCDC82 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
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