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Open reading frame (ORF) annotation in the exon skipping event | |
3'-UTR located exon skipping events lost miRNA binding sites | |
Splicing Quantitative Trait Loci (sQTLs) in the skipped exons | |
Gene summary for WNK1 |
Gene summary |
Gene information | Gene symbol | WNK1 | Gene ID | 65125 |
Gene name | WNK lysine deficient protein kinase 1 | |
Synonyms | HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 | |
Cytomap | 12p13.33 | |
Type of gene | protein-coding | |
Description | serine/threonine-protein kinase WNK1WNK lysine deficient protein kinase 1 isoformerythrocyte 65 kDa proteinprostate-derived sterile 20-like kinaseprotein kinase with no lysine 1protein phosphatase 1, regulatory subunit 167serine/threonine-protein ki | |
Modification date | 20200327 | |
UniProtAcc | A0A0B4J299, A5D8Z4, A5XEH6, A5XEH7, A5XEH8, | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
WNK1 | GO:0006468 | protein phosphorylation | 10660600 |
WNK1 | GO:0010923 | negative regulation of phosphatase activity | 19389623 |
WNK1 | GO:0023016 | signal transduction by trans-phosphorylation | 16669787 |
WNK1 | GO:0035556 | intracellular signal transduction | 10660600 |
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Gene structures and expression levels for WNK1 |
Skipped exons in the ROSMAP, MSBB, and Mayo based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Differentially expressed gene analysis across multiple brain tissues between AD and control. |
Tissue type | DEG direction | Base mean exp. | log2FC(AD/control) | P-value | Adj. p-value |
Differentially expressed isoform analysis across multiple brain tissues between AD and control. |
Tissue type | DEG direction | ENST | Transcript info. | Base mean exp. | log2FC(AD/control) | P-value | Adjc. p-value |
PG | UP | ENST00000535572.5 | WNK1-206:protein_coding:WNK1 | 2.278201e+03 | 8.400909e-01 | 1.145322e-06 | 9.818537e-05 |
PG | DOWN | ENST00000530271.6 | WNK1-204:protein_coding:WNK1 | 1.853886e+02 | -9.022651e-01 | 3.195393e-04 | 6.418920e-03 |
CB | UP | ENST00000542424.1 | WNK1-213:retained_intron:WNK1 | 8.132109e+01 | 1.033134e+00 | 2.888544e-16 | 2.153417e-13 |
CB | UP | ENST00000545285.5 | WNK1-219:protein_coding:WNK1 | 1.749635e+01 | 1.773415e+00 | 1.149008e-09 | 4.886996e-08 |
CB | UP | ENST00000540360.5 | WNK1-211:lncRNA:WNK1 | 1.307733e+01 | 1.265578e+00 | 1.420499e-08 | 4.059549e-07 |
CB | DOWN | ENST00000340908.8 | WNK1-202:protein_coding:WNK1 | 1.744015e+02 | -9.091824e-01 | 1.015542e-07 | 2.151307e-06 |
CB | UP | ENST00000535698.1 | WNK1-207:protein_coding:WNK1 | 3.858956e+00 | 8.965560e-01 | 1.522200e-05 | 1.505670e-04 |
CB | UP | ENST00000534872.1 | WNK1-205:protein_coding:WNK1 | 5.141459e+00 | 1.705004e+00 | 2.677499e-05 | 2.424641e-04 |
Landscape of isoform expressions across multiple brain tissues between AD and control. |
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Exon skipping events with PSIs in ROSMAP, MSBB, and Mayo for WNK1 |
Landscape of individual exon skipping event across AD tissues and controls (PSI heatmap). |
All exon skipping events in AD cohorts. |
Exon skip ID | chr | Exons involved in exon skipping | Skipped exon |
exon_skip_116052 | chr12 | 889140:889223:890453:890510:894562:894635 | 890453:890510 |
exon_skip_123062 | chr12 | 881934:882073:882943:883059:883395:883419 | 882943:883059 |
exon_skip_128310 | chr12 | 862235:862270:878212:878361:881692:881789 | 878212:878361 |
exon_skip_128631 | chr12 | 900598:900670:901561:901653:904453:904487 | 901561:901653 |
exon_skip_136971 | chr12 | 862235:862270:871265:871348:878215:878361 | 871265:871348 |
exon_skip_145420 | chr12 | 900598:900670:907847:908034:908475:909033 | 907847:908034 |
exon_skip_158915 | chr12 | 878313:878361:880721:880999:881692:881789 | 880721:880999 |
exon_skip_176300 | chr12 | 868568:869104:871265:871348:878212:878312 | 871265:871348 |
exon_skip_178110 | chr12 | 878215:878361:880721:880999:881692:881789 | 880721:880999 |
exon_skip_180240 | chr12 | 897598:897681:900476:900670:907847:907956 | 900476:900670 |
exon_skip_184965 | chr12 | 878215:878361:879573:880031:880721:880783 | 879573:880031 |
exon_skip_186733 | chr12 | 857161:857249:859245:859464:861013:861135 | 859245:859464 |
exon_skip_187939 | chr12 | 862235:862270:867866:869104:871265:871348 | 867866:869104 |
exon_skip_188258 | chr12 | 883395:883568:883774:883831:884121:884243 | 883774:883831 |
exon_skip_190833 | chr12 | 901561:901632:904453:904494:907847:907956 | 904453:904494 |
exon_skip_216782 | chr12 | 900598:900670:904453:904494:907847:907956 | 904453:904494 |
exon_skip_217286 | chr12 | 900598:900670:907847:908034:908475:911300 | 907847:908034 |
exon_skip_2335 | chr12 | 897479:897681:900476:900670:907847:907956 | 900476:900670 |
exon_skip_239434 | chr12 | 862235:862270:867866:869104:871265:871318 | 867866:869104 |
exon_skip_248174 | chr12 | 889140:889223:890453:890513:894562:894635 | 890453:890513 |
exon_skip_251166 | chr12 | 878215:878361:879573:880031:880721:880814 | 879573:880031 |
exon_skip_257643 | chr12 | 878313:878361:879573:880031:880721:880814 | 879573:880031 |
exon_skip_270261 | chr12 | 878272:878361:880721:880999:881692:881789 | 880721:880999 |
exon_skip_278862 | chr12 | 878272:878361:879573:880031:880721:880814 | 879573:880031 |
exon_skip_289725 | chr12 | 881911:882073:882943:883059:883395:883419 | 882943:883059 |
exon_skip_291878 | chr12 | 879573:880031:880721:880999:881692:881789 | 880721:880999 |
exon_skip_293790 | chr12 | 862235:862270:871265:871348:878212:878243 | 871265:871348 |
exon_skip_29586 | chr12 | 890453:890513:894562:894635:896071:896732 | 894562:894635 |
exon_skip_35191 | chr12 | 900598:900670:901561:901632:904453:904487 | 901561:901632 |
exon_skip_44786 | chr12 | 862235:862270:871265:871348:878212:878312 | 871265:871348 |
exon_skip_82655 | chr12 | 862235:862270:871265:871348:878215:878243 | 871265:871348 |
exon_skip_83347 | chr12 | 887221:887304:889140:889223:890453:890510 | 889140:889223 |
Differentially expressed PSI values of individual exon skipping events in multiple brain tissues between AD and control. |
Exon skipping information | Tissue type | Avg(PSIs) in AD | Avg(PSIs) in control | Difference (PSI) | Adj. p-value |
exon_skip_187939 | MSBB_PG | 1.168702e-01 | 2.169091e-01 | -1.000389e-01 | 2.712669e-03 |
exon_skip_270261 | Mayo_CB | 5.026829e-01 | 3.985333e-01 | 1.041496e-01 | 5.495597e-04 |
exon_skip_190833 | Mayo_CB | 5.724390e-01 | 6.990625e-01 | -1.266235e-01 | 3.022195e-06 |
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Open reading frame (ORF) annotation in the exon skipping event for WNK1 |
Open reading frame (ORF) of individual exon skipping events in ROSMAP based on the Ensembl gene structure combined from isoforms. |
ENST | Start of skipped exon | End of skipped exon | ORF |
ENST00000315939 | 859245 | 859464 | Frame-shift |
ENST00000315939 | 883774 | 883831 | Frame-shift |
ENST00000315939 | 890453 | 890513 | Frame-shift |
ENST00000315939 | 894562 | 894635 | Frame-shift |
ENST00000315939 | 907847 | 908034 | Frame-shift |
ENST00000315939 | 871265 | 871348 | In-frame |
ENST00000315939 | 879573 | 880031 | In-frame |
ENST00000315939 | 880721 | 880999 | In-frame |
ENST00000315939 | 882943 | 883059 | In-frame |
ENST00000315939 | 889140 | 889223 | In-frame |
ENST00000315939 | 900476 | 900670 | In-frame |
Open reading frame (ORF) of individual exon skipping events in MSBB based on the Ensembl gene structure combined from isoforms. |
ENST | Start of skipped exon | End of skipped exon | ORF |
ENST00000315939 | 859245 | 859464 | Frame-shift |
ENST00000315939 | 883774 | 883831 | Frame-shift |
ENST00000315939 | 890453 | 890513 | Frame-shift |
ENST00000315939 | 871265 | 871348 | In-frame |
ENST00000315939 | 879573 | 880031 | In-frame |
ENST00000315939 | 880721 | 880999 | In-frame |
ENST00000315939 | 882943 | 883059 | In-frame |
ENST00000315939 | 900476 | 900670 | In-frame |
Open reading frame (ORF) of individual exon skipping events in Mayo based on the Ensembl gene structure combined from isoforms. |
ENST | Start of skipped exon | End of skipped exon | ORF |
ENST00000315939 | 859245 | 859464 | Frame-shift |
ENST00000315939 | 883774 | 883831 | Frame-shift |
ENST00000315939 | 890453 | 890513 | Frame-shift |
ENST00000315939 | 894562 | 894635 | Frame-shift |
ENST00000315939 | 871265 | 871348 | In-frame |
ENST00000315939 | 879573 | 880031 | In-frame |
ENST00000315939 | 880721 | 880999 | In-frame |
ENST00000315939 | 882943 | 883059 | In-frame |
ENST00000315939 | 889140 | 889223 | In-frame |
ENST00000315939 | 900476 | 900670 | In-frame |
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Infer the effects of exon skipping event on protein functional features for WNK1 |
p-ENSG00000060237_img4.png |
Loci of skipped exons in ROSMAP across genomic, transcript, and protein sequence levels of In-frame cases. |
ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
ENST00000315939 | 10469 | 2382 | 871265 | 871348 | 2784 | 2866 | 713 | 741 |
ENST00000315939 | 10469 | 2382 | 879573 | 880031 | 3018 | 3475 | 791 | 944 |
ENST00000315939 | 10469 | 2382 | 880721 | 880999 | 3477 | 3754 | 944 | 1037 |
ENST00000315939 | 10469 | 2382 | 882943 | 883059 | 4017 | 4132 | 1124 | 1163 |
ENST00000315939 | 10469 | 2382 | 889140 | 889223 | 6009 | 6091 | 1788 | 1816 |
ENST00000315939 | 10469 | 2382 | 900476 | 900670 | 7093 | 7286 | 2150 | 2214 |
Loci of skipped exons in MSBB across genomic, transcript, and protein sequence levels of In-frame cases. |
ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
ENST00000315939 | 10469 | 2382 | 871265 | 871348 | 2784 | 2866 | 713 | 741 |
ENST00000315939 | 10469 | 2382 | 879573 | 880031 | 3018 | 3475 | 791 | 944 |
ENST00000315939 | 10469 | 2382 | 880721 | 880999 | 3477 | 3754 | 944 | 1037 |
ENST00000315939 | 10469 | 2382 | 882943 | 883059 | 4017 | 4132 | 1124 | 1163 |
ENST00000315939 | 10469 | 2382 | 900476 | 900670 | 7093 | 7286 | 2150 | 2214 |
Loci of skipped exons in Mayo across genomic, transcript, and protein sequence levels of In-frame cases. |
ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
ENST00000315939 | 10469 | 2382 | 871265 | 871348 | 2784 | 2866 | 713 | 741 |
ENST00000315939 | 10469 | 2382 | 879573 | 880031 | 3018 | 3475 | 791 | 944 |
ENST00000315939 | 10469 | 2382 | 880721 | 880999 | 3477 | 3754 | 944 | 1037 |
ENST00000315939 | 10469 | 2382 | 882943 | 883059 | 4017 | 4132 | 1124 | 1163 |
ENST00000315939 | 10469 | 2382 | 889140 | 889223 | 6009 | 6091 | 1788 | 1816 |
ENST00000315939 | 10469 | 2382 | 900476 | 900670 | 7093 | 7286 | 2150 | 2214 |
Lost protein functional features of individual exon skipping events in ROSMAP. |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9H4A3 | 713 | 741 | 713 | 713 | Alternative sequence | ID=VSP_040267;Note=In isoform 5 and isoform 6. V->VPQSMAHPCGGTPTYPESQIFFPTIHERPVSFSPPPTCPPKVAISQRRKSTSFLEAQTHHFQPLLRTVGQSLLPPGGSPTNWTPEAVVMLGTTASRVTGESCEIQVHPMFEPSQVYSDYRPGLVLPEEAHYFIPQEAVYVAGVHYQARVAEQYEGIPYNSSVLSSPMKQIPEQKPVQGGPTSSSVFEFPSGQAFLVGHLQNLRLD |
Q9H4A3 | 713 | 741 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 713 | 741 | 740 | 740 | Alternative sequence | ID=VSP_040269;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 713 | 741 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 791 | 944 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 791 | 944 | 792 | 1037 | Alternative sequence | ID=VSP_050638;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 791 | 944 | 792 | 944 | Alternative sequence | ID=VSP_040270;Note=In isoform 5. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q9H4A3 | 791 | 944 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 791 | 944 | 823 | 823 | Natural variant | ID=VAR_041315;Note=H->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=dbSNP:rs56015776,PMID:17344846 |
Q9H4A3 | 944 | 1037 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 944 | 1037 | 792 | 1037 | Alternative sequence | ID=VSP_050638;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 944 | 1037 | 792 | 944 | Alternative sequence | ID=VSP_040270;Note=In isoform 5. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q9H4A3 | 944 | 1037 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1124 | 1163 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1788 | 1816 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1788 | 1816 | 1799 | 1799 | Natural variant | ID=VAR_035641;Note=In breast cancer samples%3B infiltrating ductal carcinoma%3B somatic mutation. Q->E;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16959974,ECO:0000269|PubMed:17344846;Dbxref=PMID:16959974,PMID:17344846 |
Q9H4A3 | 1788 | 1816 | 1808 | 1808 | Natural variant | ID=VAR_041317;Note=M->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11571656,ECO:0000269|PubMed:17344846,ECO:0000269|Ref.3;Dbxref=dbSNP:rs12828016,PMID:11571656,PMID:17344846 |
Q9H4A3 | 2150 | 2214 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 2150 | 2214 | 2190 | 2190 | Natural variant | ID=VAR_041320;Note=In a breast pleomorphic lobular carcinoma sample%3B somatic mutation. S->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=PMID:17344846 |
Lost protein functional features of individual exon skipping events in MSBB. |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9H4A3 | 713 | 741 | 713 | 713 | Alternative sequence | ID=VSP_040267;Note=In isoform 5 and isoform 6. V->VPQSMAHPCGGTPTYPESQIFFPTIHERPVSFSPPPTCPPKVAISQRRKSTSFLEAQTHHFQPLLRTVGQSLLPPGGSPTNWTPEAVVMLGTTASRVTGESCEIQVHPMFEPSQVYSDYRPGLVLPEEAHYFIPQEAVYVAGVHYQARVAEQYEGIPYNSSVLSSPMKQIPEQKPVQGGPTSSSVFEFPSGQAFLVGHLQNLRLD |
Q9H4A3 | 713 | 741 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 713 | 741 | 740 | 740 | Alternative sequence | ID=VSP_040269;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 713 | 741 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 791 | 944 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 791 | 944 | 792 | 1037 | Alternative sequence | ID=VSP_050638;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 791 | 944 | 792 | 944 | Alternative sequence | ID=VSP_040270;Note=In isoform 5. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q9H4A3 | 791 | 944 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 791 | 944 | 823 | 823 | Natural variant | ID=VAR_041315;Note=H->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=dbSNP:rs56015776,PMID:17344846 |
Q9H4A3 | 944 | 1037 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 944 | 1037 | 792 | 1037 | Alternative sequence | ID=VSP_050638;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 944 | 1037 | 792 | 944 | Alternative sequence | ID=VSP_040270;Note=In isoform 5. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q9H4A3 | 944 | 1037 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1124 | 1163 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 2150 | 2214 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 2150 | 2214 | 2190 | 2190 | Natural variant | ID=VAR_041320;Note=In a breast pleomorphic lobular carcinoma sample%3B somatic mutation. S->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=PMID:17344846 |
Lost protein functional features of individual exon skipping events in Mayo. |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q9H4A3 | 713 | 741 | 713 | 713 | Alternative sequence | ID=VSP_040267;Note=In isoform 5 and isoform 6. V->VPQSMAHPCGGTPTYPESQIFFPTIHERPVSFSPPPTCPPKVAISQRRKSTSFLEAQTHHFQPLLRTVGQSLLPPGGSPTNWTPEAVVMLGTTASRVTGESCEIQVHPMFEPSQVYSDYRPGLVLPEEAHYFIPQEAVYVAGVHYQARVAEQYEGIPYNSSVLSSPMKQIPEQKPVQGGPTSSSVFEFPSGQAFLVGHLQNLRLD |
Q9H4A3 | 713 | 741 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 713 | 741 | 740 | 740 | Alternative sequence | ID=VSP_040269;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 713 | 741 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 791 | 944 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 791 | 944 | 792 | 1037 | Alternative sequence | ID=VSP_050638;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 791 | 944 | 792 | 944 | Alternative sequence | ID=VSP_040270;Note=In isoform 5. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q9H4A3 | 791 | 944 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 791 | 944 | 823 | 823 | Natural variant | ID=VAR_041315;Note=H->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=dbSNP:rs56015776,PMID:17344846 |
Q9H4A3 | 944 | 1037 | 714 | 1037 | Alternative sequence | ID=VSP_040268;Note=In isoform 4. AQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPGVSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVP |
Q9H4A3 | 944 | 1037 | 792 | 1037 | Alternative sequence | ID=VSP_050638;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:9205841;Dbxref=PMID:9205841 |
Q9H4A3 | 944 | 1037 | 792 | 944 | Alternative sequence | ID=VSP_040270;Note=In isoform 5. Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q9H4A3 | 944 | 1037 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1124 | 1163 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1788 | 1816 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 1788 | 1816 | 1799 | 1799 | Natural variant | ID=VAR_035641;Note=In breast cancer samples%3B infiltrating ductal carcinoma%3B somatic mutation. Q->E;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16959974,ECO:0000269|PubMed:17344846;Dbxref=PMID:16959974,PMID:17344846 |
Q9H4A3 | 1788 | 1816 | 1808 | 1808 | Natural variant | ID=VAR_041317;Note=M->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:11571656,ECO:0000269|PubMed:17344846,ECO:0000269|Ref.3;Dbxref=dbSNP:rs12828016,PMID:11571656,PMID:17344846 |
Q9H4A3 | 2150 | 2214 | 1 | 2382 | Chain | ID=PRO_0000086819;Note=Serine/threonine-protein kinase WNK1 |
Q9H4A3 | 2150 | 2214 | 2190 | 2190 | Natural variant | ID=VAR_041320;Note=In a breast pleomorphic lobular carcinoma sample%3B somatic mutation. S->C;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=PMID:17344846 |
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3'-UTR located exon skipping events that lost miRNA binding sites in WNK1 |
3'-UTR exon skipping evnets lost miRNA binding. |
Tissue type | ENST | Exon skip start | Exon skip end | microRNA | Binding site by TargetScan | Binding type by TargetScan | Bdinding site by miRanda | Score of miRanda | Energy by miRanda |
Top |
SNVs in the skipped exons for WNK1 |
- Differential PSIs between mutated versus non-mutated samples. |
- Depth of Coverage in the skipped exon of the mutated samples. |
- Sashimi plot in the skipped exon of the mutated samples. |
- Non-synonymous mutations located in the skipped exons. |
Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
- Non-synonymous mutations located in the skipped exons in CCLE. |
Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
Top |
AD stage-associated exon skippint events for WNK1 |
Associated exon skipping events with Braak staging or Clinical Dementia Rating (CDR). |
AD stage info | Cohort | Tissue | SE id | Coefficient | P-value | Chromosome | Strand | E1 start | E1 end | Skipped start | Skipped end | E2 start | E2 end |
ADstage | MSBB | IFG | exon_skip_187939 | -3.861741e-01 | 4.237818e-02 | chr12 | + | 862235 | 862270 | 867866 | 869104 | 871265 | 871348 |
CDR | MSBB | IFG | exon_skip_187939 | -4.031855e-01 | 3.338398e-02 | chr12 | + | 862235 | 862270 | 867866 | 869104 | 871265 | 871348 |
CDR | MSBB | STG | exon_skip_216782 | -3.294274e-01 | 1.262275e-03 | chr12 | + | 900598 | 900670 | 904453 | 904494 | 907847 | 907956 |
Top |
Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for WNK1 |
sQTL information located at the skipped exons. |
Tissue type | Exon skip ID | SNP id | Location | P-value | FDR |
HCC | exon_skip_128631 | rs6489750 | chr12:823871 | 5.241350e-05 | 5.251787e-03 |
Top |
Correlation with RNA binding proteins (RBPs) for WNK1 |
Correlated RBP and related information. |
Tissue type | RBP name | Exon skip ID | Correlation coeifficient | P-value |
CB | SRSF2 | exon_skip_187939 | 5.706445e-01 | 1.352826e-14 |
CB | RBMS1 | exon_skip_187939 | 4.147558e-01 | 9.808611e-08 |
CB | RBM25 | exon_skip_187939 | 4.970703e-01 | 6.333427e-11 |
CB | RBM6 | exon_skip_187939 | -4.974346e-01 | 6.103131e-11 |
CB | SRSF11 | exon_skip_187939 | 4.396639e-01 | 1.300335e-08 |
CB | TIA1 | exon_skip_187939 | 5.780500e-01 | 5.123929e-15 |
CB | RBM3 | exon_skip_187939 | 6.231233e-01 | 7.895482e-18 |
CB | HNRNPK | exon_skip_187939 | 4.666857e-01 | 1.198749e-09 |
CB | UNK | exon_skip_187939 | 4.181639e-01 | 7.510693e-08 |
CB | FUBP3 | exon_skip_187939 | 5.373625e-01 | 7.980342e-13 |
CB | HNRNPA0 | exon_skip_187939 | 4.057532e-01 | 1.957587e-07 |
CB | HNRNPDL | exon_skip_187939 | 7.069850e-01 | 1.750073e-24 |
CB | RBM45 | exon_skip_187939 | 6.677160e-01 | 4.244803e-21 |
CB | HNRNPD | exon_skip_187939 | 6.132412e-01 | 3.568974e-17 |
CB | NUP42 | exon_skip_187939 | 5.927478e-01 | 6.927177e-16 |
CB | RALYL | exon_skip_187939 | 4.768079e-01 | 4.646245e-10 |
CB | PTBP3 | exon_skip_187939 | 4.949109e-01 | 7.881209e-11 |
CB | PABPC1 | exon_skip_187939 | 5.819864e-01 | 3.027776e-15 |
CB | SRSF9 | exon_skip_187939 | 4.901911e-01 | 1.264267e-10 |
CB | SRSF5 | exon_skip_187939 | 4.301648e-01 | 2.864826e-08 |
CB | HNRNPH2 | exon_skip_187939 | 4.695420e-01 | 9.203017e-10 |
CB | RBM4 | exon_skip_187939 | -4.476159e-01 | 6.586946e-09 |
CB | ELAVL1 | exon_skip_270261 | 5.313079e-01 | 8.130061e-13 |
CB | SRSF11 | exon_skip_270261 | 4.023735e-01 | 1.751406e-07 |
CB | CNOT4 | exon_skip_270261 | 4.494673e-01 | 3.526974e-09 |
CB | TIA1 | exon_skip_270261 | 4.208383e-01 | 4.065642e-08 |
CB | RBM5 | exon_skip_270261 | 4.364799e-01 | 1.099636e-08 |
CB | TRNAU1AP | exon_skip_270261 | 4.293550e-01 | 2.011378e-08 |
CB | FXR2 | exon_skip_270261 | 6.101021e-01 | 2.217964e-17 |
CB | PCBP1 | exon_skip_270261 | 5.034789e-01 | 1.805138e-11 |
CB | ILF2 | exon_skip_270261 | 4.402972e-01 | 7.911145e-09 |
CB | HNRNPK | exon_skip_270261 | 4.456709e-01 | 4.942031e-09 |
CB | PCBP2 | exon_skip_270261 | 5.137072e-01 | 5.967383e-12 |
CB | RALYL | exon_skip_270261 | 4.626598e-01 | 1.057092e-09 |
CB | HNRNPL | exon_skip_270261 | 4.979636e-01 | 3.229829e-11 |
CB | RBM23 | exon_skip_270261 | 5.886573e-01 | 5.149656e-16 |
CB | EWSR1 | exon_skip_270261 | 5.399586e-01 | 2.923761e-13 |
CB | SRSF1 | exon_skip_270261 | 4.386151e-01 | 9.151072e-09 |
CB | SRSF4 | exon_skip_270261 | 4.979295e-01 | 3.241372e-11 |
CB | SRSF9 | exon_skip_270261 | 4.226854e-01 | 3.495901e-08 |
CB | HNRNPH2 | exon_skip_270261 | 4.763732e-01 | 2.857961e-10 |
CB | RBM41 | exon_skip_270261 | 4.715845e-01 | 4.542363e-10 |
CB | HNRNPF | exon_skip_270261 | 4.190395e-01 | 4.705526e-08 |
CB | CNOT4 | exon_skip_116052 | -4.906735e-01 | 8.681354e-10 |
CB | PCBP2 | exon_skip_2335 | -4.025834e-01 | 1.435409e-07 |
CB | TRA2A | exon_skip_74325 | -4.359839e-01 | 3.048094e-08 |
CB | TARDBP | exon_skip_223650 | 5.633513e-01 | 1.073106e-14 |
CB | TRA2A | exon_skip_223650 | 5.118664e-01 | 5.356095e-12 |
CB | EWSR1 | exon_skip_223650 | 4.880795e-01 | 6.761138e-11 |
CB | SRSF1 | exon_skip_223650 | 5.698378e-01 | 4.537035e-15 |
CB | SRSF9 | exon_skip_223650 | 4.604158e-01 | 1.019951e-09 |
CB | TARDBP | exon_skip_82790 | -4.210345e-01 | 7.468665e-07 |
CB | NUP42 | exon_skip_82790 | 4.229437e-01 | 6.573371e-07 |
CB | HNRNPF | exon_skip_82790 | -4.000055e-01 | 2.897216e-06 |
CB | NUP42 | exon_skip_165466 | 7.193524e-01 | 1.260836e-26 |
CB | RALYL | exon_skip_165466 | 5.941195e-01 | 1.519505e-16 |
CB | PABPC4 | exon_skip_165466 | 4.217598e-01 | 3.081544e-08 |
CB | SRSF9 | exon_skip_165466 | 6.164514e-01 | 5.141903e-18 |
CB | EIF4B | exon_skip_165466 | 4.962844e-01 | 2.882277e-11 |
CB | ILF2 | exon_skip_142744 | 4.167131e-01 | 4.663268e-08 |
CB | NUP42 | exon_skip_142744 | 4.886277e-01 | 6.391249e-11 |
CB | RALYL | exon_skip_142744 | 4.920683e-01 | 4.479570e-11 |
CB | EWSR1 | exon_skip_142744 | 4.324754e-01 | 1.249728e-08 |
CB | SRSF9 | exon_skip_142744 | 5.501200e-01 | 5.868475e-14 |
CB | EIF4B | exon_skip_142744 | 4.862048e-01 | 8.189458e-11 |
CB | NUP42 | exon_skip_275618 | 4.369434e-01 | 3.495492e-07 |
CB | NUP42 | exon_skip_216782 | 6.708926e-01 | 3.853323e-22 |
CB | SRSF9 | exon_skip_216782 | 6.438520e-01 | 5.482180e-20 |
CB | EIF4B | exon_skip_216782 | 5.427116e-01 | 1.471289e-13 |
CB | ILF2 | exon_skip_143253 | 4.315285e-01 | 1.355197e-08 |
CB | NUP42 | exon_skip_143253 | 5.773011e-01 | 1.645629e-15 |
CB | SRSF9 | exon_skip_143253 | 6.207310e-01 | 2.605042e-18 |
CB | EIF4B | exon_skip_143253 | 5.441103e-01 | 1.239035e-13 |
CB | TRA2A | exon_skip_65051 | -5.312440e-01 | 1.108675e-10 |
CB | NUP42 | exon_skip_65051 | 4.924023e-01 | 3.557084e-09 |
CB | TRA2A | exon_skip_190833 | -6.136779e-01 | 1.788352e-16 |
CB | NUP42 | exon_skip_190833 | 4.985916e-01 | 1.508959e-10 |
CB | TRA2A | exon_skip_171545 | -5.265069e-01 | 1.438609e-11 |
CB | NUP42 | exon_skip_171545 | 4.600135e-01 | 7.469243e-09 |
CB | TRA2A | exon_skip_203507 | -5.222880e-01 | 8.038801e-10 |
CB | NUP42 | exon_skip_203507 | 4.533844e-01 | 1.768413e-07 |
CB | TRA2A | exon_skip_259749 | -5.401175e-01 | 4.672574e-10 |
CB | NUP42 | exon_skip_259749 | 4.619702e-01 | 2.025091e-07 |
DLPFC | EIF4B | exon_skip_143253 | 4.951191e-01 | 1.722057e-22 |
DLPFC | SRSF11 | exon_skip_187939 | -4.386478e-01 | 5.805529e-16 |
DLPFC | RC3H1 | exon_skip_187939 | 5.136521e-01 | 3.341055e-22 |
DLPFC | KHDRBS2 | exon_skip_187939 | 5.814851e-01 | 2.398230e-29 |
DLPFC | EIF4B | exon_skip_216782 | 4.834575e-01 | 2.242274e-21 |
DLPFC | SRSF11 | exon_skip_178110 | -4.079654e-01 | 4.561049e-15 |
DLPFC | RC3H1 | exon_skip_178110 | 4.226132e-01 | 3.673706e-16 |
FL | SRSF2 | exon_skip_187939 | 4.332474e-01 | 4.759813e-10 |
FL | MSI1 | exon_skip_187939 | -4.342433e-01 | 4.299625e-10 |
FL | ELAVL4 | exon_skip_187939 | 5.548604e-01 | 1.185160e-16 |
FL | RBM3 | exon_skip_187939 | 4.210459e-01 | 1.611050e-09 |
FL | FXR2 | exon_skip_187939 | 4.205980e-01 | 1.683250e-09 |
FL | ILF2 | exon_skip_187939 | 4.780074e-01 | 3.507029e-12 |
FL | HNRNPK | exon_skip_187939 | 4.248369e-01 | 1.108776e-09 |
FL | RBM24 | exon_skip_187939 | 4.055721e-01 | 7.061993e-09 |
FL | HNRNPA0 | exon_skip_187939 | 4.373696e-01 | 3.118038e-10 |
FL | RALYL | exon_skip_187939 | 4.245641e-01 | 1.139162e-09 |
FL | HNRNPH2 | exon_skip_187939 | 5.631590e-01 | 3.307661e-17 |
FL | SRSF2 | exon_skip_178110 | 5.530464e-01 | 2.449575e-17 |
FL | MSI1 | exon_skip_178110 | -5.131917e-01 | 9.168264e-15 |
FL | ELAVL4 | exon_skip_178110 | 6.568951e-01 | 5.942093e-26 |
FL | RBM25 | exon_skip_178110 | 4.035920e-01 | 3.403244e-09 |
FL | SRSF11 | exon_skip_178110 | 4.524980e-01 | 1.948986e-11 |
FL | TIA1 | exon_skip_178110 | 5.337096e-01 | 4.785143e-16 |
FL | TRNAU1AP | exon_skip_178110 | 4.630522e-01 | 5.718269e-12 |
FL | FXR2 | exon_skip_178110 | 5.036402e-01 | 3.392131e-14 |
FL | ILF2 | exon_skip_178110 | 5.390508e-01 | 2.145830e-16 |
FL | HNRNPK | exon_skip_178110 | 5.795893e-01 | 2.987386e-19 |
FL | PCBP2 | exon_skip_178110 | 4.704563e-01 | 2.358468e-12 |
FL | RC3H1 | exon_skip_178110 | 4.354646e-01 | 1.293211e-10 |
FL | RBM24 | exon_skip_178110 | 6.174556e-01 | 2.656020e-22 |
FL | FUBP1 | exon_skip_178110 | 5.538938e-01 | 2.140903e-17 |
FL | ENOX1 | exon_skip_178110 | 5.326374e-01 | 5.611458e-16 |
FL | RALYL | exon_skip_178110 | 6.757852e-01 | 6.673131e-28 |
FL | PTBP3 | exon_skip_178110 | 4.529966e-01 | 1.841027e-11 |
FL | HNRNPL | exon_skip_178110 | 5.040300e-01 | 3.218325e-14 |
FL | RBM23 | exon_skip_178110 | 5.220885e-01 | 2.611107e-15 |
FL | SRSF1 | exon_skip_178110 | 5.731197e-01 | 9.072835e-19 |
FL | SRSF9 | exon_skip_178110 | 5.229320e-01 | 2.313556e-15 |
FL | HNRNPH2 | exon_skip_178110 | 4.107751e-01 | 1.677534e-09 |
FL | RBM41 | exon_skip_178110 | 4.509333e-01 | 2.329273e-11 |
FL | NOVA1 | exon_skip_178110 | 5.571612e-01 | 1.269139e-17 |
FL | MBNL1 | exon_skip_165466 | 5.241893e-01 | 2.272611e-15 |
FL | ILF2 | exon_skip_165466 | 5.536200e-01 | 2.691957e-17 |
FL | NUP42 | exon_skip_165466 | 4.591120e-01 | 1.024911e-11 |
FL | RALYL | exon_skip_165466 | 6.467358e-01 | 7.663736e-25 |
FL | SRSF1 | exon_skip_165466 | 4.939630e-01 | 1.413123e-13 |
FL | SRSF9 | exon_skip_165466 | 5.420410e-01 | 1.623714e-16 |
FL | EIF4B | exon_skip_165466 | 5.154321e-01 | 7.844194e-15 |
FL | ESRP1 | exon_skip_165466 | 4.356367e-01 | 1.413674e-10 |
FL | NOVA1 | exon_skip_165466 | 5.792155e-01 | 3.920001e-19 |
FL | ILF2 | exon_skip_216782 | 5.375973e-01 | 3.778187e-16 |
FL | NUP42 | exon_skip_216782 | 4.629605e-01 | 7.393841e-12 |
FL | SRSF9 | exon_skip_216782 | 5.244071e-01 | 2.593330e-15 |
FL | EIF4B | exon_skip_216782 | 4.915699e-01 | 2.217757e-13 |
HCC | DAZAP1 | exon_skip_187939 | -5.391183e-01 | 5.511924e-22 |
HCC | RBMS2 | exon_skip_187939 | -5.649280e-01 | 2.035857e-24 |
HCC | MSI1 | exon_skip_187939 | -5.906992e-01 | 4.546979e-27 |
HCC | PABPN1 | exon_skip_187939 | -5.234797e-01 | 1.307488e-20 |
HCC | SFPQ | exon_skip_187939 | -5.458343e-01 | 1.344148e-22 |
HCC | ZNF638 | exon_skip_187939 | -4.493039e-01 | 5.716370e-15 |
HCC | RBM6 | exon_skip_187939 | -5.613334e-01 | 4.574383e-24 |
HCC | SRSF11 | exon_skip_187939 | -4.683404e-01 | 2.737711e-16 |
HCC | U2AF2 | exon_skip_187939 | -4.770679e-01 | 6.372883e-17 |
HCC | TIA1 | exon_skip_187939 | -4.265222e-01 | 1.705967e-13 |
HCC | RBM5 | exon_skip_187939 | -5.135333e-01 | 9.010849e-20 |
HCC | TRNAU1AP | exon_skip_187939 | -4.424808e-01 | 1.623571e-14 |
HCC | PCBP1 | exon_skip_187939 | -4.204173e-01 | 4.062165e-13 |
HCC | UNK | exon_skip_187939 | -4.337341e-01 | 5.983848e-14 |
HCC | TRA2A | exon_skip_187939 | -4.194801e-01 | 4.633716e-13 |
HCC | SF1 | exon_skip_187939 | -4.351197e-01 | 4.878879e-14 |
HCC | FUBP1 | exon_skip_187939 | -4.547561e-01 | 2.440608e-15 |
HCC | ENOX1 | exon_skip_187939 | -4.282653e-01 | 1.327374e-13 |
HCC | HNRNPA2B1 | exon_skip_187939 | -5.000675e-01 | 1.113990e-18 |
HCC | RBM45 | exon_skip_187939 | -4.273141e-01 | 1.522426e-13 |
HCC | PTBP1 | exon_skip_187939 | -6.399692e-01 | 7.428296e-33 |
HCC | SNRNP70 | exon_skip_187939 | -4.666008e-01 | 3.642756e-16 |
HCC | SRSF4 | exon_skip_187939 | -5.330206e-01 | 1.931900e-21 |
HCC | HNRNPF | exon_skip_187939 | -5.689460e-01 | 8.140376e-25 |
HCC | RBM4 | exon_skip_187939 | -5.048932e-01 | 4.581827e-19 |
HCC | PCBP4 | exon_skip_251166 | -5.998787e-01 | 8.870233e-28 |
HCC | SRSF5 | exon_skip_251166 | -4.979750e-01 | 2.513723e-18 |
HCC | MSI1 | exon_skip_178110 | -4.630551e-01 | 6.487474e-16 |
HCC | RBM6 | exon_skip_178110 | -4.718543e-01 | 1.529947e-16 |
HCC | RBM5 | exon_skip_178110 | -4.401078e-01 | 2.321565e-14 |
HCC | PTBP1 | exon_skip_178110 | -5.171389e-01 | 4.508556e-20 |
HCC | SRSF4 | exon_skip_178110 | -4.395386e-01 | 2.528446e-14 |
HCC | HNRNPF | exon_skip_178110 | -4.464438e-01 | 8.879511e-15 |
HCC | ZNF326 | exon_skip_165466 | -5.553032e-01 | 1.740368e-23 |
HCC | HNRNPF | exon_skip_165466 | -5.243506e-01 | 1.100817e-20 |
HCC | ZNF326 | exon_skip_142744 | -5.255624e-01 | 8.657382e-21 |
HCC | HNRNPF | exon_skip_142744 | -4.997517e-01 | 1.180112e-18 |
HCC | TRA2A | exon_skip_216782 | -4.127267e-01 | 1.182208e-12 |
HCC | PABPC4 | exon_skip_216782 | -4.560202e-01 | 1.999200e-15 |
HCC | HNRNPF | exon_skip_216782 | -5.685322e-01 | 8.951499e-25 |
HCC | HNRNPF | exon_skip_143253 | -4.240377e-01 | 2.433480e-13 |
IFG | SRSF2 | exon_skip_187939 | 4.043317e-01 | 3.283811e-02 |
IFG | ELAVL4 | exon_skip_187939 | 5.534547e-01 | 2.249967e-03 |
IFG | FXR2 | exon_skip_187939 | 5.554496e-01 | 2.152052e-03 |
IFG | ILF2 | exon_skip_187939 | 4.402418e-01 | 1.905250e-02 |
IFG | KHDRBS2 | exon_skip_187939 | 4.989042e-01 | 6.881998e-03 |
IFG | NUP42 | exon_skip_187939 | 4.114589e-01 | 2.960302e-02 |
IFG | RALYL | exon_skip_187939 | 6.326763e-01 | 3.030773e-04 |
IFG | HNRNPH2 | exon_skip_187939 | 6.206149e-01 | 4.258199e-04 |
IFG | RBM23 | exon_skip_136971 | 4.465756e-01 | 1.720698e-02 |
IFG | ELAVL4 | exon_skip_178110 | 5.402226e-01 | 3.001872e-03 |
IFG | IGF2BP2 | exon_skip_178110 | -4.568332e-01 | 1.453226e-02 |
IFG | FXR2 | exon_skip_178110 | 4.761518e-01 | 1.042709e-02 |
IFG | RBM24 | exon_skip_178110 | 4.758125e-01 | 1.048974e-02 |
IFG | RALYL | exon_skip_178110 | 6.166925e-01 | 4.741948e-04 |
IFG | NOVA1 | exon_skip_178110 | 4.682022e-01 | 1.198006e-02 |
IFG | EWSR1 | exon_skip_35191 | 4.710083e-01 | 1.141124e-02 |
IFG | SRSF9 | exon_skip_35191 | 4.082001e-01 | 3.104864e-02 |
IFG | EWSR1 | exon_skip_128631 | 4.526651e-01 | 1.557421e-02 |
IFG | NOVA1 | exon_skip_128631 | 4.528641e-01 | 1.552310e-02 |
PCC | RBMS2 | exon_skip_239434 | -6.381899e-01 | 7.111597e-26 |
PCC | RBMS1 | exon_skip_239434 | -4.968860e-01 | 9.608646e-15 |
PCC | MSI1 | exon_skip_239434 | -4.351272e-01 | 2.682251e-11 |
PCC | ELAVL4 | exon_skip_239434 | 5.773221e-01 | 2.039117e-20 |
PCC | RBM6 | exon_skip_239434 | -4.960366e-01 | 1.083683e-14 |
PCC | TRNAU1AP | exon_skip_239434 | -4.218715e-01 | 1.207659e-10 |
PCC | TRA2A | exon_skip_239434 | -4.094992e-01 | 4.641970e-10 |
PCC | RALYL | exon_skip_239434 | 4.320980e-01 | 3.804836e-11 |
PCC | PTBP1 | exon_skip_239434 | -7.054274e-01 | 1.572155e-33 |
PCC | PABPC1 | exon_skip_239434 | -4.863508e-01 | 4.173579e-14 |
PCC | SRSF4 | exon_skip_239434 | -4.009202e-01 | 1.143865e-09 |
PCC | HNRNPF | exon_skip_239434 | -6.079507e-01 | 5.128809e-23 |
PCC | RBMS2 | exon_skip_68613 | -4.694860e-01 | 5.096379e-13 |
PCC | RBM6 | exon_skip_68613 | -4.184053e-01 | 2.156383e-10 |
PCC | PTBP1 | exon_skip_68613 | -5.778038e-01 | 2.812588e-20 |
PCC | HNRNPF | exon_skip_68613 | -4.677669e-01 | 6.352491e-13 |
PCC | ELAVL4 | exon_skip_178110 | 5.214885e-01 | 2.162192e-16 |
PCC | RBM6 | exon_skip_178110 | -4.848626e-01 | 4.463504e-14 |
PCC | PCBP4 | exon_skip_178110 | -4.526702e-01 | 2.939425e-12 |
PCC | PTBP1 | exon_skip_178110 | -6.619475e-01 | 1.763664e-28 |
PCC | HNRNPF | exon_skip_178110 | -5.561656e-01 | 7.423611e-19 |
PCC | RALYL | exon_skip_291878 | 4.088929e-01 | 5.175165e-09 |
PCC | ZNF326 | exon_skip_165466 | -4.953112e-01 | 1.040618e-14 |
PCC | RALYL | exon_skip_165466 | 5.026419e-01 | 3.635622e-15 |
PCC | HNRNPF | exon_skip_165466 | -5.545699e-01 | 9.780620e-19 |
PCC | ZNF326 | exon_skip_142744 | -4.091576e-01 | 4.382769e-10 |
PCC | HNRNPF | exon_skip_142744 | -4.167815e-01 | 1.918630e-10 |
PCC | HNRNPF | exon_skip_216782 | -5.549138e-01 | 9.217429e-19 |
PCC | HNRNPF | exon_skip_143253 | -4.177006e-01 | 1.734317e-10 |
PG | SRSF2 | exon_skip_187939 | 4.339556e-01 | 6.102166e-10 |
PG | MSI1 | exon_skip_187939 | -4.029230e-01 | 1.186614e-08 |
PG | ELAVL4 | exon_skip_187939 | 7.596238e-01 | 3.215827e-36 |
PG | RBM25 | exon_skip_187939 | 4.256726e-01 | 1.387976e-09 |
PG | ELAVL1 | exon_skip_187939 | 4.463367e-01 | 1.712943e-10 |
PG | RBM3 | exon_skip_187939 | 4.428062e-01 | 2.473668e-10 |
PG | MBNL1 | exon_skip_187939 | 4.289861e-01 | 1.001764e-09 |
PG | FXR2 | exon_skip_187939 | 6.520604e-01 | 6.734280e-24 |
PG | PCBP1 | exon_skip_187939 | 5.158253e-01 | 4.899297e-14 |
PG | ILF2 | exon_skip_187939 | 5.364302e-01 | 2.989525e-15 |
PG | HNRNPK | exon_skip_187939 | 5.378740e-01 | 2.439863e-15 |
PG | KHDRBS2 | exon_skip_187939 | 5.305175e-01 | 6.801126e-15 |
PG | RBM24 | exon_skip_187939 | 5.876541e-01 | 1.172503e-18 |
PG | HNRNPA0 | exon_skip_187939 | 5.423574e-01 | 1.290263e-15 |
PG | HNRNPDL | exon_skip_187939 | 4.858946e-01 | 2.064615e-12 |
PG | HNRNPD | exon_skip_187939 | 4.501483e-01 | 1.146487e-10 |
PG | NUP42 | exon_skip_187939 | 4.434666e-01 | 2.310060e-10 |
PG | RALYL | exon_skip_187939 | 6.874013e-01 | 2.355461e-27 |
PG | RBM42 | exon_skip_187939 | 4.405823e-01 | 3.111277e-10 |
PG | HNRNPL | exon_skip_187939 | 5.228086e-01 | 1.939487e-14 |
PG | CELF1 | exon_skip_187939 | 5.191796e-01 | 3.147572e-14 |
PG | EWSR1 | exon_skip_187939 | 4.768321e-01 | 5.976081e-12 |
PG | SRSF5 | exon_skip_187939 | 4.387334e-01 | 3.760074e-10 |
PG | HNRNPH2 | exon_skip_187939 | 7.051080e-01 | 2.808818e-29 |
PG | NOVA1 | exon_skip_187939 | 5.228513e-01 | 1.928392e-14 |
PG | FXR2 | exon_skip_251166 | 4.344002e-01 | 4.989822e-09 |
PG | RALYL | exon_skip_251166 | 4.560732e-01 | 6.617721e-10 |
PG | HNRNPH2 | exon_skip_251166 | 4.350324e-01 | 4.713627e-09 |
PG | SRSF2 | exon_skip_178110 | 5.020316e-01 | 1.021648e-13 |
PG | MSI1 | exon_skip_178110 | -4.619121e-01 | 1.364030e-11 |
PG | ELAVL4 | exon_skip_178110 | 6.947819e-01 | 3.778183e-29 |
PG | RBM25 | exon_skip_178110 | 4.816613e-01 | 1.327643e-12 |
PG | ELAVL1 | exon_skip_178110 | 5.092933e-01 | 3.927022e-14 |
PG | SRSF11 | exon_skip_178110 | 4.553324e-01 | 2.869213e-11 |
PG | CNOT4 | exon_skip_178110 | 4.143265e-01 | 2.098254e-09 |
PG | TRNAU1AP | exon_skip_178110 | 4.416923e-01 | 1.275439e-10 |
PG | FXR2 | exon_skip_178110 | 6.320741e-01 | 6.361151e-23 |
PG | PCBP1 | exon_skip_178110 | 5.202141e-01 | 8.927711e-15 |
PG | ILF2 | exon_skip_178110 | 5.422269e-01 | 3.816687e-16 |
PG | HNRNPK | exon_skip_178110 | 5.819733e-01 | 6.921000e-19 |
PG | RC3H1 | exon_skip_178110 | 4.230686e-01 | 8.812392e-10 |
PG | RBM24 | exon_skip_178110 | 6.418365e-01 | 8.492758e-24 |
PG | FUBP1 | exon_skip_178110 | 4.008914e-01 | 7.588954e-09 |
PG | ENOX1 | exon_skip_178110 | 4.397777e-01 | 1.564316e-10 |
PG | HNRNPDL | exon_skip_178110 | 4.985298e-01 | 1.607158e-13 |
PG | RALYL | exon_skip_178110 | 6.818797e-01 | 9.671477e-28 |
PG | HNRNPL | exon_skip_178110 | 5.329798e-01 | 1.475480e-15 |
PG | RBM23 | exon_skip_178110 | 4.889356e-01 | 5.417301e-13 |
PG | EWSR1 | exon_skip_178110 | 4.065608e-01 | 4.442092e-09 |
PG | SRSF1 | exon_skip_178110 | 4.310682e-01 | 3.897277e-10 |
PG | SRSF9 | exon_skip_178110 | 4.202147e-01 | 1.172949e-09 |
PG | SRSF5 | exon_skip_178110 | 4.142175e-01 | 2.120744e-09 |
PG | HNRNPH2 | exon_skip_178110 | 6.358827e-01 | 2.924844e-23 |
PG | NOVA1 | exon_skip_178110 | 5.642558e-01 | 1.281450e-17 |
PG | MBNL1 | exon_skip_165466 | 4.814324e-01 | 1.365154e-12 |
PG | ILF2 | exon_skip_165466 | 5.715978e-01 | 3.905549e-18 |
PG | NUP42 | exon_skip_165466 | 4.904306e-01 | 4.493956e-13 |
PG | RALYL | exon_skip_165466 | 7.392282e-01 | 1.250767e-34 |
PG | SRSF1 | exon_skip_165466 | 4.672923e-01 | 7.338180e-12 |
PG | SRSF9 | exon_skip_165466 | 5.082844e-01 | 4.491011e-14 |
PG | EIF4B | exon_skip_165466 | 4.732674e-01 | 3.639365e-12 |
PG | NOVA1 | exon_skip_165466 | 6.188096e-01 | 8.769876e-22 |
PG | ILF2 | exon_skip_216782 | 5.520273e-01 | 6.015353e-17 |
PG | NUP42 | exon_skip_216782 | 5.408232e-01 | 3.307685e-16 |
PG | SRSF9 | exon_skip_216782 | 4.951568e-01 | 1.858336e-13 |
PG | EIF4B | exon_skip_216782 | 4.849552e-01 | 6.750180e-13 |
STG | SRSF2 | exon_skip_187939 | 4.122477e-01 | 6.581355e-05 |
STG | MSI1 | exon_skip_187939 | -5.432124e-01 | 4.543422e-08 |
STG | ELAVL4 | exon_skip_187939 | 6.770687e-01 | 4.411311e-13 |
STG | IGF2BP2 | exon_skip_187939 | -4.520436e-01 | 9.816775e-06 |
STG | FXR2 | exon_skip_187939 | 4.513102e-01 | 1.018948e-05 |
STG | PCBP1 | exon_skip_187939 | 4.211262e-01 | 4.393644e-05 |
STG | ILF2 | exon_skip_187939 | 4.638015e-01 | 5.337785e-06 |
STG | HNRNPK | exon_skip_187939 | 4.268383e-01 | 3.367408e-05 |
STG | KHDRBS2 | exon_skip_187939 | 4.640659e-01 | 5.263765e-06 |
STG | RBM24 | exon_skip_187939 | 4.413275e-01 | 1.677871e-05 |
STG | HNRNPA0 | exon_skip_187939 | 5.664104e-01 | 8.825310e-09 |
STG | HNRNPDL | exon_skip_187939 | 4.604301e-01 | 6.371418e-06 |
STG | RALYL | exon_skip_187939 | 6.191957e-01 | 1.270690e-10 |
STG | HNRNPL | exon_skip_187939 | 4.099911e-01 | 7.280158e-05 |
STG | HNRNPH2 | exon_skip_187939 | 6.215581e-01 | 1.031547e-10 |
STG | ESRP2 | exon_skip_187939 | -4.268474e-01 | 3.365963e-05 |
STG | NOVA1 | exon_skip_187939 | 4.422272e-01 | 1.605138e-05 |
STG | MSI1 | exon_skip_178110 | -4.033470e-01 | 6.702149e-05 |
STG | ELAVL4 | exon_skip_178110 | 5.437702e-01 | 2.123594e-08 |
STG | PCBP1 | exon_skip_178110 | 4.729707e-01 | 1.927455e-06 |
STG | RBM24 | exon_skip_178110 | 4.937275e-01 | 5.702091e-07 |
STG | FUBP1 | exon_skip_178110 | 4.119087e-01 | 4.512874e-05 |
STG | ENOX1 | exon_skip_178110 | 4.260059e-01 | 2.297702e-05 |
STG | RALYL | exon_skip_178110 | 5.497185e-01 | 1.384624e-08 |
STG | HNRNPH2 | exon_skip_178110 | 4.873069e-01 | 8.382618e-07 |
STG | NOVA1 | exon_skip_178110 | 4.909396e-01 | 6.747074e-07 |
STG | PABPN1L | exon_skip_216782 | -4.266706e-01 | 2.001298e-05 |
STG | ILF2 | exon_skip_216782 | 4.842151e-01 | 8.759851e-07 |
STG | NUP42 | exon_skip_216782 | 5.061577e-01 | 2.268091e-07 |
STG | SRSF9 | exon_skip_216782 | 5.061428e-01 | 2.270251e-07 |
STG | EIF4B | exon_skip_216782 | 4.857047e-01 | 8.015665e-07 |
TC | SRSF2 | exon_skip_187939 | 5.789787e-01 | 1.061162e-15 |
TC | ELAVL4 | exon_skip_187939 | 8.237768e-01 | 8.721228e-41 |
TC | RBM25 | exon_skip_187939 | 5.539641e-01 | 2.996156e-14 |
TC | ELAVL1 | exon_skip_187939 | 4.590377e-01 | 1.027747e-09 |
TC | RBM6 | exon_skip_187939 | -4.307270e-01 | 1.305672e-08 |
TC | SRSF11 | exon_skip_187939 | 4.633990e-01 | 6.802559e-10 |
TC | CNOT4 | exon_skip_187939 | 5.112276e-01 | 4.925347e-12 |
TC | TIA1 | exon_skip_187939 | 4.086385e-01 | 8.119178e-08 |
TC | RBM3 | exon_skip_187939 | 4.615783e-01 | 8.087153e-10 |
TC | MBNL1 | exon_skip_187939 | 5.440826e-01 | 1.039931e-13 |
TC | FXR2 | exon_skip_187939 | 4.857547e-01 | 7.471295e-11 |
TC | PCBP1 | exon_skip_187939 | 4.203760e-01 | 3.125117e-08 |
TC | ILF2 | exon_skip_187939 | 5.794295e-01 | 9.965326e-16 |
TC | HNRNPK | exon_skip_187939 | 5.424994e-01 | 1.264616e-13 |
TC | KHDRBS2 | exon_skip_187939 | 8.444874e-01 | 1.066376e-44 |
TC | RBM24 | exon_skip_187939 | 7.382523e-01 | 8.187226e-29 |
TC | ENOX1 | exon_skip_187939 | 4.429465e-01 | 4.484415e-09 |
TC | KHSRP | exon_skip_187939 | 4.176780e-01 | 3.904682e-08 |
TC | HNRNPA0 | exon_skip_187939 | 7.667246e-01 | 3.187072e-32 |
TC | HNRNPDL | exon_skip_187939 | 5.586112e-01 | 1.645096e-14 |
TC | RBM45 | exon_skip_187939 | 4.802211e-01 | 1.310166e-10 |
TC | PUF60 | exon_skip_187939 | 4.139557e-01 | 5.292204e-08 |
TC | HNRNPD | exon_skip_187939 | 7.208684e-01 | 6.089324e-27 |
TC | NUP42 | exon_skip_187939 | 7.256593e-01 | 1.919407e-27 |
TC | RALYL | exon_skip_187939 | 8.075840e-01 | 4.561836e-38 |
TC | PTBP3 | exon_skip_187939 | 6.445386e-01 | 3.707001e-20 |
TC | HNRNPL | exon_skip_187939 | 4.292933e-01 | 1.476031e-08 |
TC | CELF1 | exon_skip_187939 | 6.454695e-01 | 3.146743e-20 |
TC | EWSR1 | exon_skip_187939 | 4.411346e-01 | 5.268511e-09 |
TC | SRSF1 | exon_skip_187939 | 4.432902e-01 | 4.348917e-09 |
TC | SRSF9 | exon_skip_187939 | 4.655867e-01 | 5.518517e-10 |
TC | SRSF5 | exon_skip_187939 | 4.816945e-01 | 1.129274e-10 |
TC | HNRNPH2 | exon_skip_187939 | 7.759746e-01 | 1.946653e-33 |
TC | ESRP1 | exon_skip_187939 | 6.637334e-01 | 1.122483e-21 |
TC | NOVA1 | exon_skip_187939 | 6.227630e-01 | 1.465865e-18 |
TC | FXR2 | exon_skip_257643 | 4.103776e-01 | 7.769967e-08 |
TC | RALYL | exon_skip_257643 | 5.977290e-01 | 8.947932e-17 |
TC | PTBP3 | exon_skip_257643 | 4.554411e-01 | 1.620260e-09 |
TC | HNRNPH2 | exon_skip_257643 | 4.366653e-01 | 8.706026e-09 |
TC | ELAVL4 | exon_skip_158915 | 6.031774e-01 | 3.158744e-17 |
TC | RBM25 | exon_skip_158915 | 4.057878e-01 | 1.018222e-07 |
TC | ILF2 | exon_skip_158915 | 4.002083e-01 | 1.576380e-07 |
TC | HNRNPK | exon_skip_158915 | 4.012141e-01 | 1.457798e-07 |
TC | RBM24 | exon_skip_158915 | 5.692975e-01 | 3.997879e-15 |
TC | RALYL | exon_skip_158915 | 5.767277e-01 | 1.450143e-15 |
TC | PTBP3 | exon_skip_158915 | 4.494375e-01 | 2.498059e-09 |
TC | HNRNPH2 | exon_skip_158915 | 5.344351e-01 | 3.371738e-13 |
TC | ESRP1 | exon_skip_158915 | 4.925292e-01 | 3.704839e-11 |
TC | NOVA1 | exon_skip_158915 | 4.766776e-01 | 1.867470e-10 |
TC | NOVA1 | exon_skip_35191 | 4.090218e-01 | 8.655180e-08 |
TC | RALYL | exon_skip_128631 | 5.939782e-01 | 1.934119e-16 |
TC | ILF2 | exon_skip_165466 | 5.091640e-01 | 6.191251e-12 |
TC | NUP42 | exon_skip_165466 | 7.024103e-01 | 4.192583e-25 |
TC | RALYL | exon_skip_165466 | 8.127300e-01 | 6.666488e-39 |
TC | EWSR1 | exon_skip_165466 | 4.054476e-01 | 1.045962e-07 |
TC | ESRP1 | exon_skip_165466 | 6.411177e-01 | 6.736460e-20 |
TC | NOVA1 | exon_skip_165466 | 6.532610e-01 | 7.806432e-21 |
TC | MBNL1 | exon_skip_142744 | 4.142557e-01 | 5.164819e-08 |
TC | ILF2 | exon_skip_142744 | 4.673348e-01 | 4.664072e-10 |
TC | NUP42 | exon_skip_142744 | 6.238774e-01 | 1.222912e-18 |
TC | RALYL | exon_skip_142744 | 7.868643e-01 | 6.073587e-35 |
TC | SRSF9 | exon_skip_142744 | 4.074628e-01 | 8.916098e-08 |
TC | ESRP1 | exon_skip_142744 | 5.945055e-01 | 1.151337e-16 |
TC | NOVA1 | exon_skip_142744 | 5.363859e-01 | 2.666044e-13 |
TC | ILF2 | exon_skip_216782 | 5.082622e-01 | 6.838881e-12 |
TC | NUP42 | exon_skip_216782 | 6.705590e-01 | 3.039114e-22 |
TC | ESRP1 | exon_skip_216782 | 5.737100e-01 | 2.195945e-15 |
TC | ILF2 | exon_skip_143253 | 4.730561e-01 | 2.671554e-10 |
TC | NUP42 | exon_skip_143253 | 6.246177e-01 | 1.083764e-18 |
TC | SRSF9 | exon_skip_143253 | 4.127042e-01 | 5.857040e-08 |
TC | ESRP1 | exon_skip_143253 | 6.013788e-01 | 4.143928e-17 |
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RelatedDrugs for WNK1 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for WNK1 |
Diseases associated with this gene. (DisGeNet 4.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |