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| Open reading frame (ORF) annotation in the exon skipping event |
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| 3'-UTR located exon skipping events lost miRNA binding sites |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
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Gene summary for ARMCX6 |
 Gene summary |
| Gene information | Gene symbol | ARMCX6 | Gene ID | 54470 |
| Gene name | armadillo repeat containing X-linked 6 | |
| Synonyms | GASP10 | |
| Cytomap | Xq22.1 | |
| Type of gene | protein-coding | |
| Description | protein ARMCX6 | |
| Modification date | 20200313 | |
| UniProtAcc | A0A024RCG5, Q7L4S7, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Gene structures and expression levels for ARMCX6 |
| Skipped exons in the ROSMAP, MSBB, and Mayo based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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ENSG00000198960
| Differentially expressed gene analysis across multiple brain tissues between AD and control. |
| Tissue type | DEG direction | Base mean exp. | log2FC(AD/control) | P-value | Adj. p-value |
| Differentially expressed isoform analysis across multiple brain tissues between AD and control. |
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| Tissue type | DEG direction | ENST | Transcript info. | Base mean exp. | log2FC(AD/control) | P-value | Adjc. p-value |
| CB | DOWN | ENST00000497931.5 | ARMCX6-206:lncRNA:ARMCX6 | 6.916091e+01 | -8.743771e-01 | 1.508119e-10 | 8.905849e-09 |
| CB | UP | ENST00000467089.1 | ARMCX6-203:lncRNA:ARMCX6 | 1.079288e+01 | 1.694962e+00 | 9.335696e-09 | 2.834562e-07 |
| Landscape of isoform expressions across multiple brain tissues between AD and control. |
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Exon skipping events with PSIs in ROSMAP, MSBB, and Mayo for ARMCX6 |
| Landscape of individual exon skipping event across AD tissues and controls (PSI heatmap). |
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| All exon skipping events in AD cohorts. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon |
| exon_skip_180099 | chrX | 101616690:101616766:101617292:101617370:101617503:101617584 | 101617292:101617370 |
| exon_skip_19866 | chrX | 101616672:101616766:101617292:101617370:101617503:101617584 | 101617292:101617370 |
| exon_skip_265885 | chrX | 101616672:101616766:101617503:101617584:101617885:101617910 | 101617503:101617584 |
| exon_skip_34240 | chrX | 101616213:101616766:101617503:101617584:101617885:101618000 | 101617503:101617584 |
| exon_skip_34629 | chrX | 101616672:101616766:101617283:101617370:101617503:101617584 | 101617283:101617370 |
| exon_skip_76280 | chrX | 101616690:101616766:101617283:101617370:101617503:101617584 | 101617283:101617370 |
| Differentially expressed PSI values of individual exon skipping events in multiple brain tissues between AD and control. |