Exon skip ID | chr | Exons involved in exon skipping | Skipped exon |
exon_skip_105390 | chr4 | 84829004:84829190:84831413:84831605:84836929:84837090 | 84831413:84831605 |
exon_skip_107541 | chr4 | 84755266:84755400:84756926:84757161:84765810:84766027 | 84756926:84757161 |
exon_skip_126791 | chr4 | 84709293:84709347:84713159:84713239:84715298:84715383 | 84713159:84713239 |
exon_skip_139318 | chr4 | 84829004:84829190:84831413:84831605:84836929:84836996 | 84831413:84831605 |
exon_skip_164962 | chr4 | 84831413:84831605:84836929:84837090:84841154:84841263 | 84836929:84837090 |
exon_skip_168367 | chr4 | 84672291:84672991:84677199:84677396:84678168:84678279 | 84677199:84677396 |
exon_skip_19494 | chr4 | 84841192:84841263:84844456:84844509:84849902:84849968 | 84844456:84844509 |
exon_skip_197214 | chr4 | 84794879:84794979:84796521:84796752:84797996:84798108 | 84796521:84796752 |
exon_skip_202853 | chr4 | 84704338:84704444:84705394:84705511:84708909:84709028 | 84705394:84705511 |
exon_skip_20700 | chr4 | 84778503:84778655:84780108:84780298:84782963:84783070 | 84780108:84780298 |
exon_skip_211914 | chr4 | 84803290:84803467:84808334:84808417:84809887:84810107 | 84808334:84808417 |
exon_skip_218311 | chr4 | 84696732:84696823:84702353:84702506:84704338:84704444 | 84702353:84702506 |
exon_skip_232473 | chr4 | 84821084:84821551:84826815:84826981:84829004:84829190 | 84826815:84826981 |
exon_skip_236096 | chr4 | 84809887:84810344:84817392:84817585:84820085:84820186 | 84817392:84817585 |
exon_skip_272499 | chr4 | 84841192:84841263:84844456:84844509:84849902:84850015 | 84844456:84844509 |
exon_skip_277942 | chr4 | 84724582:84724594:84726861:84726911:84733382:84733462 | 84726861:84726911 |
exon_skip_283461 | chr4 | 84678919:84679242:84682374:84682470:84683943:84684125 | 84682374:84682470 |
exon_skip_294376 | chr4 | 84678947:84679242:84682374:84682470:84683943:84684125 | 84682374:84682470 |
exon_skip_35620 | chr4 | 84724426:84724594:84726861:84726911:84733382:84733462 | 84726861:84726911 |
exon_skip_37513 | chr4 | 84740187:84740416:84741761:84741921:84743700:84743799 | 84741761:84741921 |
exon_skip_76266 | chr4 | 84678168:84678279:84678919:84679242:84682374:84682470 | 84678919:84679242 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q8IZQ1 | 782 | 809 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2407 | 2423 | 2408 | 2424 | Alternative sequence | ID=VSP_019475;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039 |
Q8IZQ1 | 2407 | 2423 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2407 | 2423 | 2285 | 2981 | Region | Note=Sufficient for localization to p62 bodies/ALIS;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 2654 | 2680 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2654 | 2680 | 2531 | 2656 | Domain | Note=BEACH-type PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01119 |
Q8IZQ1 | 2654 | 2680 | 2285 | 2981 | Region | Note=Sufficient for localization to p62 bodies/ALIS;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 2654 | 2680 | 2586 | 3526 | Region | Note=Interaction with SQSTM1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 3420 | 3485 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 3420 | 3485 | 2586 | 3526 | Region | Note=Interaction with SQSTM1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 3420 | 3485 | 2981 | 3526 | Region | Note=Interaction with ATG5;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20417604;Dbxref=PMID:20417604 |
Q8IZQ1 | 3420 | 3485 | 3408 | 3447 | Repeat | Note=WD 5 |
Q8IZQ1 | 3420 | 3485 | 3454 | 3514 | Zinc finger | Note=FYVE-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00091 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q8IZQ1 | 782 | 809 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2407 | 2423 | 2408 | 2424 | Alternative sequence | ID=VSP_019475;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039 |
Q8IZQ1 | 2407 | 2423 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2407 | 2423 | 2285 | 2981 | Region | Note=Sufficient for localization to p62 bodies/ALIS;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Q8IZQ1 | 138 | 191 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 782 | 809 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2407 | 2423 | 2408 | 2424 | Alternative sequence | ID=VSP_019475;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039 |
Q8IZQ1 | 2407 | 2423 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2407 | 2423 | 2285 | 2981 | Region | Note=Sufficient for localization to p62 bodies/ALIS;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 2654 | 2680 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 2654 | 2680 | 2531 | 2656 | Domain | Note=BEACH-type PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01119 |
Q8IZQ1 | 2654 | 2680 | 2285 | 2981 | Region | Note=Sufficient for localization to p62 bodies/ALIS;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 2654 | 2680 | 2586 | 3526 | Region | Note=Interaction with SQSTM1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 3274 | 3382 | 3346 | 3348 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3WIM |
Q8IZQ1 | 3274 | 3382 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 3274 | 3382 | 3335 | 3335 | Modified residue | Note=Phosphoserine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q6VNB8 |
Q8IZQ1 | 3274 | 3382 | 3339 | 3339 | Modified residue | Note=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163 |
Q8IZQ1 | 3274 | 3382 | 3346 | 3349 | Motif | Note=LC3-interacting region (LIR);Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3343 | 3343 | Mutagenesis | Note=Decreased interaction with GABARAP%2C no effect on interaction with MAP1LC3B%3B when associated with A-3344 and A-3351. K->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3344 | 3344 | Mutagenesis | Note=Decreased interaction with GABARAP%2C no effect on interaction with MAP1LC3B%3B when associated with A-3343 and A-3351. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3346 | 3346 | Mutagenesis | Note=Abolishes interaction with GABARAP and MAP1LC3C. F->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3347 | 3347 | Mutagenesis | Note=Decreases interaction with GABARAP and MAP1LC3C. I->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3348 | 3348 | Mutagenesis | Note=Decreases interaction with GABARAP and MAP1LC3C. F->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3349 | 3349 | Mutagenesis | Note=Decreases interaction with GABARAP and MAP1LC3C. V->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 3351 | 3351 | Mutagenesis | Note=Decreased interaction with GABARAP%2C no effect on interaction with MAP1LC3B%3B when associated with A-3343 and A-3344. Y->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3274 | 3382 | 2586 | 3526 | Region | Note=Interaction with SQSTM1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 3274 | 3382 | 2981 | 3526 | Region | Note=Interaction with ATG5;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20417604;Dbxref=PMID:20417604 |
Q8IZQ1 | 3274 | 3382 | 3313 | 3363 | Region | Note=Interaction with GABARAP;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24668264;Dbxref=PMID:24668264 |
Q8IZQ1 | 3420 | 3485 | 1 | 3526 | Chain | ID=PRO_0000242693;Note=WD repeat and FYVE domain-containing protein 3 |
Q8IZQ1 | 3420 | 3485 | 2586 | 3526 | Region | Note=Interaction with SQSTM1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20168092;Dbxref=PMID:20168092 |
Q8IZQ1 | 3420 | 3485 | 2981 | 3526 | Region | Note=Interaction with ATG5;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20417604;Dbxref=PMID:20417604 |
Q8IZQ1 | 3420 | 3485 | 3408 | 3447 | Repeat | Note=WD 5 |
Q8IZQ1 | 3420 | 3485 | 3454 | 3514 | Zinc finger | Note=FYVE-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00091 |