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| Open reading frame (ORF) annotation in the exon skipping event |
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| 3'-UTR located exon skipping events lost miRNA binding sites |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
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Gene summary for NBPF20 |
 Gene summary |
| Gene information | Gene symbol | NBPF20 | Gene ID | 100288142 |
| Gene name | NBPF member 20 | |
| Synonyms | - | |
| Cytomap | 1q21.1 | |
| Type of gene | protein-coding | |
| Description | neuroblastoma breakpoint family member 20 | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Gene structures and expression levels for NBPF20 |
| Skipped exons in the ROSMAP, MSBB, and Mayo based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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ENSG00000162825
| Differentially expressed gene analysis across multiple brain tissues between AD and control. |
| Tissue type | DEG direction | Base mean exp. | log2FC(AD/control) | P-value | Adj. p-value |
| Differentially expressed isoform analysis across multiple brain tissues between AD and control. |
| Tissue type | DEG direction | ENST | Transcript info. | Base mean exp. | log2FC(AD/control) | P-value | Adjc. p-value |
| Landscape of isoform expressions across multiple brain tissues between AD and control. |
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Exon skipping events with PSIs in ROSMAP, MSBB, and Mayo for NBPF20 |
| Landscape of individual exon skipping event across AD tissues and controls (PSI heatmap). |
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| All exon skipping events in AD cohorts. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon |
| exon_skip_111727 | chr1 | 145402167:145402381:145403216:145403318:145405098:145405307 | 145403216:145403318 |
| exon_skip_142160 | chr1 | 145393884:145393935:145394978:145395141:145399049:145399100 | 145394978:145395141 |
| Differentially expressed PSI values of individual exon skipping events in multiple brain tissues between AD and control. |